RNA–Protein interactions for RNA: ENST00000552879.5

LMBR1L-228, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-228ENST00000552879 BCL11BQ9C0K0 894 aaPredicted RBP16.18■□□□□ 0.18
LMBR1L-228ENST00000552879 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
LMBR1L-228ENST00000552879 SBF2Q86WG5 1849 aa16.17■□□□□ 0.18
LMBR1L-228ENST00000552879 SHANK3Q9BYB0 1731 aa16.17■□□□□ 0.18
LMBR1L-228ENST00000552879 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
LMBR1L-228ENST00000552879 IL13P35225 146 aa16.17■□□□□ 0.18
LMBR1L-228ENST00000552879 RAPGEF4Q8WZA2 1011 aa16.17■□□□□ 0.18
LMBR1L-228ENST00000552879 ACSBG1Q96GR2 724 aa16.17■□□□□ 0.18
LMBR1L-228ENST00000552879 CYP27B1O15528 508 aa16.15■□□□□ 0.18
LMBR1L-228ENST00000552879 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
LMBR1L-228ENST00000552879 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
LMBR1L-228ENST00000552879 PROM2Q8N271 834 aa16.14■□□□□ 0.17
LMBR1L-228ENST00000552879 PLSCR1O15162 318 aa16.13■□□□□ 0.17
LMBR1L-228ENST00000552879 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
LMBR1L-228ENST00000552879 COL3A1P02461 1466 aaPredicted RBP16.11■□□□□ 0.17
LMBR1L-228ENST00000552879 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
LMBR1L-228ENST00000552879 PPP2R1AP30153 589 aa16.1■□□□□ 0.17
LMBR1L-228ENST00000552879 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
LMBR1L-228ENST00000552879 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
LMBR1L-228ENST00000552879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.17
LMBR1L-228ENST00000552879 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
LMBR1L-228ENST00000552879 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
LMBR1L-228ENST00000552879 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
LMBR1L-228ENST00000552879 RREB1Q92766 1687 aa16.09■□□□□ 0.17
LMBR1L-228ENST00000552879 NKX1-1Q15270 411 aaPredicted RBP16.09■□□□□ 0.17
LMBR1L-228ENST00000552879 SULT6B1Q6IMI4 303 aa16.09■□□□□ 0.17
LMBR1L-228ENST00000552879 KDRP35968 1356 aa16.09■□□□□ 0.17
LMBR1L-228ENST00000552879 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
LMBR1L-228ENST00000552879 PHKG2P15735 406 aa16.07■□□□□ 0.16
LMBR1L-228ENST00000552879 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
LMBR1L-228ENST00000552879 NUP188Q5SRE5 1749 aa16.06■□□□□ 0.16
LMBR1L-228ENST00000552879 DOT1LQ8TEK3 1739 aa16.06■□□□□ 0.16
LMBR1L-228ENST00000552879 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
LMBR1L-228ENST00000552879 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
LMBR1L-228ENST00000552879 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
LMBR1L-228ENST00000552879 RGPD3A6NKT7 1758 aaPredicted RBP16.05■□□□□ 0.16
LMBR1L-228ENST00000552879 RGPD4Q7Z3J3 1758 aa16.05■□□□□ 0.16
LMBR1L-228ENST00000552879 HMOX1P09601 288 aa16.05■□□□□ 0.16
LMBR1L-228ENST00000552879 SYTL4Q96C24 671 aaPredicted RBP16.05■□□□□ 0.16
LMBR1L-228ENST00000552879 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
LMBR1L-228ENST00000552879 BTAF1O14981 1849 aa16.05■□□□□ 0.16
LMBR1L-228ENST00000552879 TOGARAM1Q9Y4F4 1720 aa16.05■□□□□ 0.16
LMBR1L-228ENST00000552879 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
LMBR1L-228ENST00000552879 IFNL2Q8IZJ0 200 aa16.04■□□□□ 0.16
LMBR1L-228ENST00000552879 LRRC4BQ9NT99 713 aa16.04■□□□□ 0.16
LMBR1L-228ENST00000552879 PLEKHO1Q53GL0 409 aaPredicted RBP16.03■□□□□ 0.16
LMBR1L-228ENST00000552879 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.16
LMBR1L-228ENST00000552879 PIGBQ92521 554 aa16.02■□□□□ 0.16
LMBR1L-228ENST00000552879 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.15
LMBR1L-228ENST00000552879 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
LMBR1L-228ENST00000552879 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
LMBR1L-228ENST00000552879 KCNQ4P56696 695 aa16■□□□□ 0.15
LMBR1L-228ENST00000552879 MPRIPQ6WCQ1 1025 aa16■□□□□ 0.15
LMBR1L-228ENST00000552879 KDM6AO15550 1401 aaPredicted RBP16■□□□□ 0.15
LMBR1L-228ENST00000552879 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
LMBR1L-228ENST00000552879 MTHFSDQ2M296 383 aaKnown RBP15.98■□□□□ 0.15
LMBR1L-228ENST00000552879 CFAP53Q96M91 514 aa15.98■□□□□ 0.15
LMBR1L-228ENST00000552879 PAPPAQ13219 1627 aa15.97■□□□□ 0.15
LMBR1L-228ENST00000552879 DCAF5Q96JK2 942 aa15.97■□□□□ 0.15
LMBR1L-228ENST00000552879 PDGFDQ9GZP0 370 aaPredicted RBP15.97■□□□□ 0.15
LMBR1L-228ENST00000552879 ITGB4P16144 1822 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 ZNF316A6NFI3 1004 aaPredicted RBP15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 RALBP1Q15311 655 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 SLC15A2Q16348 729 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 ZNF827Q17R98 1081 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 SLC27A3Q5K4L6 730 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 PHACTR3Q96KR7 559 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 KAT6BQ8WYB5 2073 aa15.96■□□□□ 0.15
LMBR1L-228ENST00000552879 LY75O60449 1722 aa15.95■□□□□ 0.14
LMBR1L-228ENST00000552879 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
LMBR1L-228ENST00000552879 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
LMBR1L-228ENST00000552879 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
LMBR1L-228ENST00000552879 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
LMBR1L-228ENST00000552879 ASAP1Q9ULH1 1129 aa15.95■□□□□ 0.14
LMBR1L-228ENST00000552879 PALLDQ8WX93 1383 aa15.95■□□□□ 0.14
LMBR1L-228ENST00000552879 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
LMBR1L-228ENST00000552879 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
LMBR1L-228ENST00000552879 TMOD3Q9NYL9 352 aa15.94■□□□□ 0.14
LMBR1L-228ENST00000552879 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
LMBR1L-228ENST00000552879 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
LMBR1L-228ENST00000552879 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.14
LMBR1L-228ENST00000552879 C1orf141Q5JVX7 400 aa15.93■□□□□ 0.14
LMBR1L-228ENST00000552879 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
LMBR1L-228ENST00000552879 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
LMBR1L-228ENST00000552879 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
LMBR1L-228ENST00000552879 PRKRIP1Q9H875 184 aaPredicted RBP15.92■□□□□ 0.14
LMBR1L-228ENST00000552879 STK32BQ9NY57 414 aa15.92■□□□□ 0.14
LMBR1L-228ENST00000552879 FCHSD2O94868 740 aa15.91■□□□□ 0.14
LMBR1L-228ENST00000552879 NFATC2IPQ8NCF5 419 aa15.91■□□□□ 0.14
LMBR1L-228ENST00000552879 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
LMBR1L-228ENST00000552879 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
LMBR1L-228ENST00000552879 MYBBP1AQ9BQG0 1328 aaKnown RBP15.91■□□□□ 0.14
LMBR1L-228ENST00000552879 CABP4P57796 275 aa15.9■□□□□ 0.14
LMBR1L-228ENST00000552879 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.13
LMBR1L-228ENST00000552879 LOC102724428A0A0B4J2F2 783 aa15.89■□□□□ 0.13
LMBR1L-228ENST00000552879 SIK1P57059 783 aa15.89■□□□□ 0.13
LMBR1L-228ENST00000552879 ITPK1Q13572 414 aa15.89■□□□□ 0.13
LMBR1L-228ENST00000552879 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
LMBR1L-228ENST00000552879 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms