RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
TUBA1C-209ENST00000552448 TRIM27P14373 513 aa13.76□□□□□ -0.21
TUBA1C-209ENST00000552448 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
TUBA1C-209ENST00000552448 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
TUBA1C-209ENST00000552448 THUMPD2Q9BTF0 503 aaKnown RBP13.76□□□□□ -0.21
TUBA1C-209ENST00000552448 PANK2Q9BZ23 570 aa13.76□□□□□ -0.21
TUBA1C-209ENST00000552448 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
TUBA1C-209ENST00000552448 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
TUBA1C-209ENST00000552448 HSPA2P54652 639 aa13.75□□□□□ -0.21
TUBA1C-209ENST00000552448 FTSJ3Q8IY81 847 aaKnown RBP13.75□□□□□ -0.21
TUBA1C-209ENST00000552448 IFT57Q9NWB7 429 aa13.75□□□□□ -0.21
TUBA1C-209ENST00000552448 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
TUBA1C-209ENST00000552448 SEC24BO95487 1268 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 GNAI1P63096 354 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 CCDC173Q0VFZ6 552 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 ZNF428Q96B54 188 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 NOB1Q9ULX3 412 aaKnown RBP13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 RGPD1P0DJD0 1748 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 BRPF1P55201 1214 aaPredicted RBP13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
TUBA1C-209ENST00000552448 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
TUBA1C-209ENST00000552448 TMEM94Q12767 1356 aa13.73□□□□□ -0.21
TUBA1C-209ENST00000552448 ANP32BQ92688 251 aaKnown RBP13.73□□□□□ -0.21
TUBA1C-209ENST00000552448 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
TUBA1C-209ENST00000552448 PODXL2Q9NZ53 605 aa13.73□□□□□ -0.21
TUBA1C-209ENST00000552448 C1orf167Q5SNV9 1468 aa13.73□□□□□ -0.21
TUBA1C-209ENST00000552448 VAMP4O75379 141 aa13.72□□□□□ -0.21
TUBA1C-209ENST00000552448 ATF3P18847 181 aa13.72□□□□□ -0.21
TUBA1C-209ENST00000552448 PSME1Q06323 249 aa13.72□□□□□ -0.21
TUBA1C-209ENST00000552448 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
TUBA1C-209ENST00000552448 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
TUBA1C-209ENST00000552448 RBM33Q96EV2 1170 aaKnown RBP13.72□□□□□ -0.21
TUBA1C-209ENST00000552448 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
TUBA1C-209ENST00000552448 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
TUBA1C-209ENST00000552448 MAP3K19Q56UN5 1328 aa13.71□□□□□ -0.21
TUBA1C-209ENST00000552448 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.21
TUBA1C-209ENST00000552448 CFAP44Q96MT7 982 aa13.71□□□□□ -0.21
TUBA1C-209ENST00000552448 MBIPQ9NS73 344 aa13.71□□□□□ -0.21
TUBA1C-209ENST00000552448 FLT4P35916 1363 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 FAM83GA6ND36 823 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 OFD1O75665 1012 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 NLRP6P59044 892 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 HSCBQ8IWL3 235 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 ABTB2Q8N961 1025 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 DDX19BQ9UMR2 479 aa13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.22
TUBA1C-209ENST00000552448 MST1RQ04912 1400 aa13.7□□□□□ -0.22
TUBA1C-209ENST00000552448 MSH6P52701 1360 aa13.7□□□□□ -0.22
TUBA1C-209ENST00000552448 ZSCAN30Q86W11 494 aa13.7□□□□□ -0.22
TUBA1C-209ENST00000552448 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
TUBA1C-209ENST00000552448 GZF1Q9H116 711 aaPredicted RBP13.7□□□□□ -0.22
TUBA1C-209ENST00000552448 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
TUBA1C-209ENST00000552448 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 SOX12O15370 315 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 TMEM57Q8N5G2 664 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 PHRF1Q9P1Y6 1649 aaKnown RBP13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 ITPRIPQ8IWB1 547 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 MRPL50Q8N5N7 158 aaKnown RBP13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 SNX21Q969T3 373 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 C22orf23Q9BZE7 217 aa13.69□□□□□ -0.22
TUBA1C-209ENST00000552448 ARHGEF10O15013 1369 aa13.68□□□□□ -0.22
TUBA1C-209ENST00000552448 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
TUBA1C-209ENST00000552448 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
TUBA1C-209ENST00000552448 LTN1O94822 1766 aa13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 C8orf58Q8NAV2 365 aa13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 ARHGAP45Q92619 1136 aa13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 PDZRN3Q9UPQ7 1066 aa13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 ORAI2Q96SN7 254 aa13.67□□□□□ -0.22
TUBA1C-209ENST00000552448 KDRP35968 1356 aa13.66□□□□□ -0.22
TUBA1C-209ENST00000552448 MSNP26038 577 aaKnown RBP13.66□□□□□ -0.22
TUBA1C-209ENST00000552448 DDIT3P35638 169 aa13.66□□□□□ -0.22
TUBA1C-209ENST00000552448 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
TUBA1C-209ENST00000552448 ARXQ96QS3 562 aa13.66□□□□□ -0.22
TUBA1C-209ENST00000552448 SLIT3O75094 1523 aa13.66□□□□□ -0.22
TUBA1C-209ENST00000552448 NFAT5O94916 1531 aa13.66□□□□□ -0.22
TUBA1C-209ENST00000552448 ELL2O00472 640 aaPredicted RBP13.65□□□□□ -0.22
TUBA1C-209ENST00000552448 AMPHP49418 695 aa13.65□□□□□ -0.22
TUBA1C-209ENST00000552448 SMAP1Q8IYB5 467 aaPredicted RBP13.65□□□□□ -0.22
TUBA1C-209ENST00000552448 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
TUBA1C-209ENST00000552448 CHL1O00533 1208 aa13.64□□□□□ -0.23
TUBA1C-209ENST00000552448 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
TUBA1C-209ENST00000552448 GOLGA6L22H0YM25 854 aa13.64□□□□□ -0.23
TUBA1C-209ENST00000552448 FOXO3O43524 673 aa13.64□□□□□ -0.23
TUBA1C-209ENST00000552448 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
TUBA1C-209ENST00000552448 EYA1Q99502 592 aa13.64□□□□□ -0.23
TUBA1C-209ENST00000552448 PRDM4Q9UKN5 801 aa13.64□□□□□ -0.23
TUBA1C-209ENST00000552448 MCM5P33992 734 aa13.63□□□□□ -0.23
TUBA1C-209ENST00000552448 MCM10Q7L590 875 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms