RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C8orf58Q8NAV2 365 aa14.73□□□□□ -0.05
RAB5C-208ENST00000551338 IP6K1Q92551 441 aa14.73□□□□□ -0.05
RAB5C-208ENST00000551338 C19orf44Q9H6X5 657 aa14.73□□□□□ -0.05
RAB5C-208ENST00000551338 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
RAB5C-208ENST00000551338 CHL1O00533 1208 aa14.72□□□□□ -0.05
RAB5C-208ENST00000551338 FOXO3O43524 673 aa14.72□□□□□ -0.05
RAB5C-208ENST00000551338 PDE4AP27815 886 aa14.72□□□□□ -0.05
RAB5C-208ENST00000551338 HSPA2P54652 639 aa14.72□□□□□ -0.05
RAB5C-208ENST00000551338 XPCQ01831 940 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-208ENST00000551338 TMEM57Q8N5G2 664 aa14.72□□□□□ -0.05
RAB5C-208ENST00000551338 KCNH5Q8NCM2 988 aa14.72□□□□□ -0.05
RAB5C-208ENST00000551338 GAS2L2Q8NHY3 880 aa14.72□□□□□ -0.05
RAB5C-208ENST00000551338 SIPA1L3O60292 1781 aaPredicted RBP14.71□□□□□ -0.05
RAB5C-208ENST00000551338 IPO8O15397 1037 aaKnown RBP14.71□□□□□ -0.05
RAB5C-208ENST00000551338 BACH2Q9BYV9 841 aa14.71□□□□□ -0.05
RAB5C-208ENST00000551338 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
RAB5C-208ENST00000551338 KRT28Q7Z3Y7 464 aa14.7□□□□□ -0.06
RAB5C-208ENST00000551338 LTV1Q96GA3 475 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-208ENST00000551338 ABCA3Q99758 1704 aa14.69□□□□□ -0.06
RAB5C-208ENST00000551338 ELL2O00472 640 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-208ENST00000551338 MSH5O43196 834 aa14.69□□□□□ -0.06
RAB5C-208ENST00000551338 ITPRIPQ8IWB1 547 aa14.69□□□□□ -0.06
RAB5C-208ENST00000551338 MAP3K5Q99683 1374 aa14.69□□□□□ -0.06
RAB5C-208ENST00000551338 PXDNQ92626 1479 aa14.69□□□□□ -0.06
RAB5C-208ENST00000551338 ABCC4O15439 1325 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 ADAMTS7Q9UKP4 1686 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 RGS12O14924 1447 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 KDM4FA0A1W2PPD8 638 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 HTATSF1O43719 755 aaKnown RBP14.68□□□□□ -0.06
RAB5C-208ENST00000551338 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 ARHGEF25Q86VW2 580 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 USHBP1Q8N6Y0 703 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 ARHGAP45Q92619 1136 aa14.68□□□□□ -0.06
RAB5C-208ENST00000551338 GCP02774 474 aa14.67□□□□□ -0.06
RAB5C-208ENST00000551338 ABCC6O95255 1503 aa14.66□□□□□ -0.06
RAB5C-208ENST00000551338 ATF3P18847 181 aa14.66□□□□□ -0.06
RAB5C-208ENST00000551338 RGS3P49796 1198 aa14.66□□□□□ -0.06
RAB5C-208ENST00000551338 RTF1Q92541 710 aaKnown RBP14.66□□□□□ -0.06
RAB5C-208ENST00000551338 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
RAB5C-208ENST00000551338 SCN11AQ9UI33 1791 aa14.65□□□□□ -0.06
RAB5C-208ENST00000551338 ZBTB7CA1YPR0 619 aa14.65□□□□□ -0.06
RAB5C-208ENST00000551338 GNAT3A8MTJ3 354 aa14.65□□□□□ -0.06
RAB5C-208ENST00000551338 NBPF6Q5VWK0 638 aa14.65□□□□□ -0.06
RAB5C-208ENST00000551338 NBPF4Q96M43 638 aa14.65□□□□□ -0.06
RAB5C-208ENST00000551338 RWDD1Q9H446 243 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-208ENST00000551338 ZBTB40Q9NUA8 1239 aa14.65□□□□□ -0.06
RAB5C-208ENST00000551338 API5Q9BZZ5 524 aaKnown RBP14.64□□□□□ -0.07
RAB5C-208ENST00000551338 PDZRN3Q9UPQ7 1066 aa14.64□□□□□ -0.07
RAB5C-208ENST00000551338 PKD1L3Q7Z443 1732 aa14.63□□□□□ -0.07
RAB5C-208ENST00000551338 NHSL1Q5SYE7 1610 aa14.63□□□□□ -0.07
RAB5C-208ENST00000551338 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-208ENST00000551338 HDAC1Q13547 482 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-208ENST00000551338 C8orf34Q49A92 452 aa14.63□□□□□ -0.07
RAB5C-208ENST00000551338 CADPS2Q86UW7 1296 aa14.63□□□□□ -0.07
RAB5C-208ENST00000551338 LRRC59Q96AG4 307 aaKnown RBP14.63□□□□□ -0.07
RAB5C-208ENST00000551338 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
RAB5C-208ENST00000551338 FAM161AQ3B820 660 aa14.62□□□□□ -0.07
RAB5C-208ENST00000551338 LMOD2Q6P5Q4 547 aa14.62□□□□□ -0.07
RAB5C-208ENST00000551338 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
RAB5C-208ENST00000551338 MIS18AQ9NYP9 233 aa14.62□□□□□ -0.07
RAB5C-208ENST00000551338 CEMIPQ8WUJ3 1361 aa14.61□□□□□ -0.07
RAB5C-208ENST00000551338 DDX17Q92841 729 aaKnown RBP14.61□□□□□ -0.07
RAB5C-208ENST00000551338 NPHP3Q7Z494 1330 aa14.61□□□□□ -0.07
RAB5C-208ENST00000551338 OVOS2A0A0G2JMS6 1433 aa14.6□□□□□ -0.07
RAB5C-208ENST00000551338 ZBTB7BO15156 539 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-208ENST00000551338 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
RAB5C-208ENST00000551338 ANP32AP39687 249 aaKnown RBP14.6□□□□□ -0.07
RAB5C-208ENST00000551338 ANKRD24Q8TF21 1146 aa14.6□□□□□ -0.07
RAB5C-208ENST00000551338 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
RAB5C-208ENST00000551338 BABAM1Q9NWV8 329 aa14.59□□□□□ -0.07
RAB5C-208ENST00000551338 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
RAB5C-208ENST00000551338 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
RAB5C-208ENST00000551338 PTPRCP08575 1304 aa14.58□□□□□ -0.08
RAB5C-208ENST00000551338 SPATA31A3Q5VYP0 1347 aa14.58□□□□□ -0.08
RAB5C-208ENST00000551338 PARP4Q9UKK3 1724 aaKnown RBP14.58□□□□□ -0.08
RAB5C-208ENST00000551338 TAF7Q15545 349 aaPredicted RBP14.57□□□□□ -0.08
RAB5C-208ENST00000551338 INTS3Q68E01 1043 aaKnown RBP14.57□□□□□ -0.08
RAB5C-208ENST00000551338 ERBB3P21860 1342 aa14.57□□□□□ -0.08
RAB5C-208ENST00000551338 ZNF335Q9H4Z2 1342 aaPredicted RBP14.57□□□□□ -0.08
RAB5C-208ENST00000551338 C5P01031 1676 aa14.56□□□□□ -0.08
RAB5C-208ENST00000551338 PLEKHO1Q53GL0 409 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-208ENST00000551338 ZNF530Q6P9A1 599 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-208ENST00000551338 SOS1Q07889 1333 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-208ENST00000551338 ATP10DQ9P241 1426 aa14.56□□□□□ -0.08
RAB5C-208ENST00000551338 ZC3H6P61129 1189 aaKnown RBP14.55□□□□□ -0.08
RAB5C-208ENST00000551338 AKAP4Q5JQC9 854 aa14.55□□□□□ -0.08
RAB5C-208ENST00000551338 BRINP3Q76B58 766 aa14.55□□□□□ -0.08
RAB5C-208ENST00000551338 G2E3Q7L622 706 aa14.55□□□□□ -0.08
RAB5C-208ENST00000551338 NPM2Q86SE8 214 aaKnown RBP14.55□□□□□ -0.08
RAB5C-208ENST00000551338 IPO9Q96P70 1041 aaKnown RBP14.55□□□□□ -0.08
RAB5C-208ENST00000551338 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
RAB5C-208ENST00000551338 AMOTQ4VCS5 1084 aa14.54□□□□□ -0.08
RAB5C-208ENST00000551338 CPDO75976 1380 aa14.54□□□□□ -0.08
RAB5C-208ENST00000551338 PXDNLA1KZ92 1463 aa14.54□□□□□ -0.08
RAB5C-208ENST00000551338 MEGF6O75095 1541 aa14.54□□□□□ -0.08
RAB5C-208ENST00000551338 SHANK3Q9BYB0 1731 aa14.54□□□□□ -0.08
RAB5C-208ENST00000551338 LGR6Q9HBX8 967 aa14.53□□□□□ -0.08
RAB5C-208ENST00000551338 RNMTO43148 476 aaKnown RBP14.52□□□□□ -0.09
RAB5C-208ENST00000551338 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
RAB5C-208ENST00000551338 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms