RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 JARID2Q92833 1246 aaPredicted RBP14.09□□□□□ -0.15
LGR5-206ENST00000550851 POLR3AO14802 1390 aaPredicted RBP14.09□□□□□ -0.15
LGR5-206ENST00000550851 KIAA2012Q0VF49 1180 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
LGR5-206ENST00000550851 NPATQ14207 1427 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 ERC1Q8IUD2 1116 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 MYD88Q99836 296 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 ABCA8O94911 1581 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 FKBP4Q02790 459 aaKnown RBP eCLIP14.08□□□□□ -0.16
LGR5-206ENST00000550851 SLC39A6Q13433 755 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 CCDC57Q2TAC2 916 aa14.08□□□□□ -0.16
LGR5-206ENST00000550851 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
LGR5-206ENST00000550851 BICDL1Q6ZP65 573 aa14.07□□□□□ -0.16
LGR5-206ENST00000550851 DNAAF4Q8WXU2 420 aa14.07□□□□□ -0.16
LGR5-206ENST00000550851 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
LGR5-206ENST00000550851 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
LGR5-206ENST00000550851 MAP3K19Q56UN5 1328 aa14.07□□□□□ -0.16
LGR5-206ENST00000550851 BICD2Q8TD16 824 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 MEIS3Q99687 375 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 UPF3BQ9BZI7 483 aaKnown RBP14.06□□□□□ -0.16
LGR5-206ENST00000550851 DBF4Q9UBU7 674 aaPredicted RBP14.06□□□□□ -0.16
LGR5-206ENST00000550851 ERCC6L2Q5T890 1561 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 PIP4K2AP48426 406 aaPredicted RBP14.06□□□□□ -0.16
LGR5-206ENST00000550851 RABEP1Q15276 862 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 EYA1Q99502 592 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 ZBTB3Q9H5J0 574 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 MAST1Q9Y2H9 1570 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 ATP5J2-PTCD1G3V325 749 aa14.06□□□□□ -0.16
LGR5-206ENST00000550851 SKOR2Q2VWA4 1001 aaPredicted RBP14.06□□□□□ -0.16
LGR5-206ENST00000550851 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 LTKP29376 864 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 CEP126Q9P2H0 1117 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 ORAI2Q96SN7 254 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 NOL10Q9BSC4 688 aaKnown RBP14.05□□□□□ -0.16
LGR5-206ENST00000550851 TBX22Q9Y458 520 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 PHF14O94880 888 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 CLSTN1O94985 981 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 CHAF1AQ13111 956 aaPredicted RBP14.05□□□□□ -0.16
LGR5-206ENST00000550851 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 CCDC8Q9H0W5 538 aaPredicted RBP14.05□□□□□ -0.16
LGR5-206ENST00000550851 TTC21AQ8NDW8 1320 aa14.05□□□□□ -0.16
LGR5-206ENST00000550851 ATP10AO60312 1499 aa14.04□□□□□ -0.16
LGR5-206ENST00000550851 MX1P20591 662 aa14.04□□□□□ -0.16
LGR5-206ENST00000550851 STK3Q13188 491 aa14.04□□□□□ -0.16
LGR5-206ENST00000550851 LARP1Q6PKG0 1096 aaKnown RBP14.04□□□□□ -0.16
LGR5-206ENST00000550851 MPHOSPH8Q99549 860 aa14.04□□□□□ -0.16
LGR5-206ENST00000550851 ARID3AQ99856 593 aa14.04□□□□□ -0.16
LGR5-206ENST00000550851 PUS7Q96PZ0 661 aaKnown RBP14.04□□□□□ -0.16
LGR5-206ENST00000550851 BOLA2Q9H3K6 86 aa14.04□□□□□ -0.16
LGR5-206ENST00000550851 RRP12Q5JTH9 1297 aaKnown RBP14.04□□□□□ -0.16
LGR5-206ENST00000550851 SPATA31E1Q6ZUB1 1445 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 DHX16O60231 1041 aaKnown RBP14.03□□□□□ -0.16
LGR5-206ENST00000550851 GCP02774 474 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 CCDC158Q5M9N0 1113 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 ABCC1P33527 1531 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 IL16Q14005 1332 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 EIF2AK4Q9P2K8 1649 aaKnown RBP14.03□□□□□ -0.16
LGR5-206ENST00000550851 GLIPR1L2Q4G1C9 344 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 IFNL2Q8IZJ0 200 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 KIF1BPQ96EK5 621 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 TBC1D2BQ9UPU7 963 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 MARCH6O60337 910 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 TRIM29Q14134 588 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 VPS53Q5VIR6 699 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 RNF214Q8ND24 703 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 MAP3K2Q9Y2U5 619 aa14.03□□□□□ -0.16
LGR5-206ENST00000550851 A0A087WZG4 1122 aa14.02□□□□□ -0.16
LGR5-206ENST00000550851 TRAK2O60296 914 aa14.02□□□□□ -0.16
LGR5-206ENST00000550851 GPTP24298 496 aa14.02□□□□□ -0.16
LGR5-206ENST00000550851 VAMP4O75379 141 aa14.02□□□□□ -0.17
LGR5-206ENST00000550851 STARD3NLO95772 234 aa14.02□□□□□ -0.17
LGR5-206ENST00000550851 SAMD9LQ8IVG5 1584 aa14.02□□□□□ -0.17
LGR5-206ENST00000550851 CHPF2Q9P2E5 772 aa14.02□□□□□ -0.17
LGR5-206ENST00000550851 PIK3C2GO75747 1445 aa14.02□□□□□ -0.17
LGR5-206ENST00000550851 PRPF40AO75400 957 aaKnown RBP14.01□□□□□ -0.17
LGR5-206ENST00000550851 PSMA5P28066 241 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 CCDC34Q96HJ3 373 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 UGGT1Q9NYU2 1555 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 BECN2A8MW95 431 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 ATP2B1P20020 1258 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 C19orf44Q9H6X5 657 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 TTC37Q6PGP7 1564 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 FIBPO43427 364 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
LGR5-206ENST00000550851 UBE3BQ7Z3V4 1068 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 FMNL2Q96PY5 1086 aa14.01□□□□□ -0.17
LGR5-206ENST00000550851 ERICH2A1L162 156 aa14□□□□□ -0.17
LGR5-206ENST00000550851 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
LGR5-206ENST00000550851 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
LGR5-206ENST00000550851 CAVIN1Q6NZI2 390 aaKnown RBP14□□□□□ -0.17
LGR5-206ENST00000550851 NGLY1Q96IV0 654 aa14□□□□□ -0.17
LGR5-206ENST00000550851 AMOTL1Q8IY63 956 aa14□□□□□ -0.17
LGR5-206ENST00000550851 PTPRCP08575 1304 aa14□□□□□ -0.17
LGR5-206ENST00000550851 PTPRTO14522 1441 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 FLT4P35916 1363 aa13.99□□□□□ -0.17
LGR5-206ENST00000550851 CEBPZQ03701 1054 aaKnown RBP13.99□□□□□ -0.17
LGR5-206ENST00000550851 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms