RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
NR4A1-215ENST00000550557 ASXL1Q8IXJ9 1541 aa14.74□□□□□ -0.05
NR4A1-215ENST00000550557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.74□□□□□ -0.05
NR4A1-215ENST00000550557 DUSP27Q5VZP5 1158 aa14.74□□□□□ -0.05
NR4A1-215ENST00000550557 WDHD1O75717 1129 aaPredicted RBP14.74□□□□□ -0.05
NR4A1-215ENST00000550557 CT47B1P0C2W7 299 aaPredicted RBP14.74□□□□□ -0.05
NR4A1-215ENST00000550557 IL2RBP14784 551 aa14.74□□□□□ -0.05
NR4A1-215ENST00000550557 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.74□□□□□ -0.05
NR4A1-215ENST00000550557 ANKIB1Q9P2G1 1089 aa14.74□□□□□ -0.05
NR4A1-215ENST00000550557 A0A087WZG4 1122 aa14.74□□□□□ -0.05
NR4A1-215ENST00000550557 ZNF622Q969S3 477 aaKnown RBP eCLIP14.74□□□□□ -0.05
NR4A1-215ENST00000550557 MCTP1Q6DN14 999 aa14.73□□□□□ -0.05
NR4A1-215ENST00000550557 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
NR4A1-215ENST00000550557 SAMD9LQ8IVG5 1584 aa14.73□□□□□ -0.05
NR4A1-215ENST00000550557 GCP02774 474 aa14.72□□□□□ -0.05
NR4A1-215ENST00000550557 CSPP1Q1MSJ5 1256 aa14.72□□□□□ -0.05
NR4A1-215ENST00000550557 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
NR4A1-215ENST00000550557 NOB1Q9ULX3 412 aaKnown RBP14.72□□□□□ -0.05
NR4A1-215ENST00000550557 SART3Q15020 963 aaKnown RBP14.72□□□□□ -0.05
NR4A1-215ENST00000550557 CNTROBQ8N137 903 aa14.72□□□□□ -0.05
NR4A1-215ENST00000550557 ADCY10Q96PN6 1610 aa14.72□□□□□ -0.05
NR4A1-215ENST00000550557 PPIP5K1Q6PFW1 1433 aa14.72□□□□□ -0.05
NR4A1-215ENST00000550557 GPTP24298 496 aa14.72□□□□□ -0.05
NR4A1-215ENST00000550557 ATP6V1AP38606 617 aa14.71□□□□□ -0.05
NR4A1-215ENST00000550557 NKTRP30414 1462 aaKnown RBP14.71□□□□□ -0.05
NR4A1-215ENST00000550557 MYO5CQ9NQX4 1742 aa14.71□□□□□ -0.05
NR4A1-215ENST00000550557 DRC7Q8IY82 874 aa14.71□□□□□ -0.05
NR4A1-215ENST00000550557 ORAI2Q96SN7 254 aa14.71□□□□□ -0.05
NR4A1-215ENST00000550557 CREBRFQ8IUR6 639 aa14.71□□□□□ -0.05
NR4A1-215ENST00000550557 ZBTB3Q9H5J0 574 aa14.71□□□□□ -0.05
NR4A1-215ENST00000550557 C6orf229H3BNL8 230 aa14.71□□□□□ -0.06
NR4A1-215ENST00000550557 HSP90AB2PQ58FF8 381 aa14.71□□□□□ -0.06
NR4A1-215ENST00000550557 RAI14Q9P0K7 980 aa14.71□□□□□ -0.06
NR4A1-215ENST00000550557 ZFYVE16Q7Z3T8 1539 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 MYD88Q99836 296 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 SRGAP3O43295 1099 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 METTL24Q5JXM2 366 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 NACAP1Q9BZK3 213 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 NSD2O96028 1365 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 ATP7AQ04656 1500 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
NR4A1-215ENST00000550557 DDX11L8A8MPP1 907 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 PREX2Q70Z35 1606 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 KIAA2012Q0VF49 1180 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 RRP12Q5JTH9 1297 aaKnown RBP14.69□□□□□ -0.06
NR4A1-215ENST00000550557 USP21Q9UK80 565 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 TTLL12Q14166 644 aaPredicted RBP14.69□□□□□ -0.06
NR4A1-215ENST00000550557 INTS3Q68E01 1043 aaKnown RBP14.69□□□□□ -0.06
NR4A1-215ENST00000550557 LRRIQ1Q96JM4 1722 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 LRP2BPQ9P2M1 347 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 ST5P78524 1137 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 CAVIN4Q5BKX8 364 aa14.69□□□□□ -0.06
NR4A1-215ENST00000550557 DBF4Q9UBU7 674 aaPredicted RBP14.69□□□□□ -0.06
NR4A1-215ENST00000550557 FKBP4Q02790 459 aaKnown RBP eCLIP14.68□□□□□ -0.06
NR4A1-215ENST00000550557 NBPF6Q5VWK0 638 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 NBPF5PQ86XG9 351 aaPredicted RBP14.68□□□□□ -0.06
NR4A1-215ENST00000550557 NBPF4Q96M43 638 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 ABCF2Q9UG63 623 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 IFIT1P09914 478 aaKnown RBP14.68□□□□□ -0.06
NR4A1-215ENST00000550557 C20orf194Q5TEA3 1177 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 KDM5CP41229 1560 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 TPM4P67936 248 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 DDX46Q7L014 1031 aaKnown RBP14.68□□□□□ -0.06
NR4A1-215ENST00000550557 PPP1R42Q7Z4L9 355 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 CDCA7Q9BWT1 371 aaPredicted RBP14.68□□□□□ -0.06
NR4A1-215ENST00000550557 STK32BQ9NY57 414 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
NR4A1-215ENST00000550557 SAFBQ15424 915 aaKnown RBP eCLIP14.67□□□□□ -0.06
NR4A1-215ENST00000550557 SYAP1Q96A49 352 aaPredicted RBP14.67□□□□□ -0.06
NR4A1-215ENST00000550557 HYPKQ9NX55 129 aa14.67□□□□□ -0.06
NR4A1-215ENST00000550557 SNRPA1P09661 255 aaKnown RBP14.67□□□□□ -0.06
NR4A1-215ENST00000550557 ZSCAN25Q6NSZ9 544 aa14.67□□□□□ -0.06
NR4A1-215ENST00000550557 IFIT5Q13325 482 aaKnown RBP14.67□□□□□ -0.06
NR4A1-215ENST00000550557 FOXD4L5Q5VV16 416 aaPredicted RBP14.67□□□□□ -0.06
NR4A1-215ENST00000550557 FOXD4L4Q8WXT5 416 aaPredicted RBP14.67□□□□□ -0.06
NR4A1-215ENST00000550557 FBLN1P23142 703 aa14.67□□□□□ -0.06
NR4A1-215ENST00000550557 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
NR4A1-215ENST00000550557 HIP1O00291 1037 aa14.66□□□□□ -0.06
NR4A1-215ENST00000550557 CDC42BPAQ5VT25 1732 aa14.66□□□□□ -0.06
NR4A1-215ENST00000550557 IFT57Q9NWB7 429 aa14.66□□□□□ -0.06
NR4A1-215ENST00000550557 TTC37Q6PGP7 1564 aa14.66□□□□□ -0.06
NR4A1-215ENST00000550557 IL27Q8NEV9 243 aa14.66□□□□□ -0.06
NR4A1-215ENST00000550557 ATF7IPQ6VMQ6 1270 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
NR4A1-215ENST00000550557 TMEM2Q9UHN6 1383 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 BAG6P46379 1132 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 SETDB2Q96T68 719 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 TRPM2O94759 1503 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 PDZRN3Q9UPQ7 1066 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 RTCBQ9Y3I0 505 aaKnown RBP14.65□□□□□ -0.06
NR4A1-215ENST00000550557 ATP6V1DQ9Y5K8 247 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 YEATS2Q9ULM3 1422 aa14.65□□□□□ -0.06
NR4A1-215ENST00000550557 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
NR4A1-215ENST00000550557 MVPQ14764 893 aaKnown RBP14.64□□□□□ -0.07
NR4A1-215ENST00000550557 ANKRD36BQ8N2N9 1353 aa14.64□□□□□ -0.07
NR4A1-215ENST00000550557 XBP1P17861 261 aa14.64□□□□□ -0.07
NR4A1-215ENST00000550557 AACSQ86V21 672 aa14.64□□□□□ -0.07
NR4A1-215ENST00000550557 CDC5LQ99459 802 aaKnown RBP14.64□□□□□ -0.07
NR4A1-215ENST00000550557 LRRCC1Q9C099 1032 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms