RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.36
ERBB3-214ENST00000550070 ATP7BP35670 1465 aa12.77□□□□□ -0.36
ERBB3-214ENST00000550070 ZNF592Q92610 1267 aa12.77□□□□□ -0.37
ERBB3-214ENST00000550070 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.37
ERBB3-214ENST00000550070 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
ERBB3-214ENST00000550070 CDC45O75419 566 aa12.76□□□□□ -0.37
ERBB3-214ENST00000550070 SSFA2P28290 1259 aa12.76□□□□□ -0.37
ERBB3-214ENST00000550070 SKOR2Q2VWA4 1001 aaPredicted RBP12.76□□□□□ -0.37
ERBB3-214ENST00000550070 NME9Q86XW9 330 aa12.76□□□□□ -0.37
ERBB3-214ENST00000550070 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
ERBB3-214ENST00000550070 DCTN1Q14203 1278 aa12.75□□□□□ -0.37
ERBB3-214ENST00000550070 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
ERBB3-214ENST00000550070 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
ERBB3-214ENST00000550070 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
ERBB3-214ENST00000550070 AK9Q5TCS8 1911 aa12.74□□□□□ -0.37
ERBB3-214ENST00000550070 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
ERBB3-214ENST00000550070 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
ERBB3-214ENST00000550070 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
ERBB3-214ENST00000550070 DCTPP1Q9H773 170 aa12.74□□□□□ -0.37
ERBB3-214ENST00000550070 CPSF1Q10570 1443 aaKnown RBP12.74□□□□□ -0.37
ERBB3-214ENST00000550070 REREQ9P2R6 1566 aa12.74□□□□□ -0.37
ERBB3-214ENST00000550070 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
ERBB3-214ENST00000550070 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
ERBB3-214ENST00000550070 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
ERBB3-214ENST00000550070 RIMS2Q9UQ26 1411 aa12.73□□□□□ -0.37
ERBB3-214ENST00000550070 ESPNB1AK53 854 aa12.73□□□□□ -0.37
ERBB3-214ENST00000550070 PTMSP20962 102 aa12.73□□□□□ -0.37
ERBB3-214ENST00000550070 EDC4Q6P2E9 1401 aaKnown RBP12.73□□□□□ -0.37
ERBB3-214ENST00000550070 TMED8Q6PL24 325 aaPredicted RBP12.73□□□□□ -0.37
ERBB3-214ENST00000550070 CEBPAP49715 358 aaPredicted RBP12.72□□□□□ -0.37
ERBB3-214ENST00000550070 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
ERBB3-214ENST00000550070 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
ERBB3-214ENST00000550070 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
ERBB3-214ENST00000550070 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
ERBB3-214ENST00000550070 AATKQ6ZMQ8 1374 aa12.72□□□□□ -0.37
ERBB3-214ENST00000550070 SETD1AO15047 1707 aaKnown RBP12.72□□□□□ -0.37
ERBB3-214ENST00000550070 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
ERBB3-214ENST00000550070 WASLO00401 505 aaPredicted RBP12.71□□□□□ -0.38
ERBB3-214ENST00000550070 BAG4O95429 457 aaKnown RBP12.71□□□□□ -0.38
ERBB3-214ENST00000550070 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.38
ERBB3-214ENST00000550070 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.38
ERBB3-214ENST00000550070 USP26Q9BXU7 913 aa12.71□□□□□ -0.38
ERBB3-214ENST00000550070 CPS1P31327 1500 aa12.71□□□□□ -0.38
ERBB3-214ENST00000550070 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
ERBB3-214ENST00000550070 RABEP1Q15276 862 aa12.7□□□□□ -0.38
ERBB3-214ENST00000550070 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
ERBB3-214ENST00000550070 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-214ENST00000550070 COG3Q96JB2 828 aa12.69□□□□□ -0.38
ERBB3-214ENST00000550070 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
ERBB3-214ENST00000550070 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
ERBB3-214ENST00000550070 GOLGA6L22H0YM25 854 aa12.69□□□□□ -0.38
ERBB3-214ENST00000550070 RGS12O14924 1447 aa12.69□□□□□ -0.38
ERBB3-214ENST00000550070 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
ERBB3-214ENST00000550070 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
ERBB3-214ENST00000550070 NUDT16Q96DE0 195 aaKnown RBP12.68□□□□□ -0.38
ERBB3-214ENST00000550070 DDX49Q9Y6V7 483 aaKnown RBP12.68□□□□□ -0.38
ERBB3-214ENST00000550070 SMARCA5O60264 1052 aaPredicted RBP12.68□□□□□ -0.38
ERBB3-214ENST00000550070 CLSTN1O94985 981 aa12.68□□□□□ -0.38
ERBB3-214ENST00000550070 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
ERBB3-214ENST00000550070 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
ERBB3-214ENST00000550070 SDSP20132 328 aa12.68□□□□□ -0.38
ERBB3-214ENST00000550070 RPAP2Q8IXW5 612 aaPredicted RBP12.67□□□□□ -0.38
ERBB3-214ENST00000550070 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
ERBB3-214ENST00000550070 APBB1O00213 710 aa12.67□□□□□ -0.38
ERBB3-214ENST00000550070 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
ERBB3-214ENST00000550070 PKP1Q13835 747 aa12.67□□□□□ -0.38
ERBB3-214ENST00000550070 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
ERBB3-214ENST00000550070 TXNDC2Q86VQ3 553 aa12.67□□□□□ -0.38
ERBB3-214ENST00000550070 CHL1O00533 1208 aa12.66□□□□□ -0.38
ERBB3-214ENST00000550070 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
ERBB3-214ENST00000550070 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
ERBB3-214ENST00000550070 METP08581 1390 aa12.66□□□□□ -0.38
ERBB3-214ENST00000550070 MSH6P52701 1360 aa12.66□□□□□ -0.38
ERBB3-214ENST00000550070 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
ERBB3-214ENST00000550070 NUCB2P80303 420 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 EIF4A2Q14240 407 aaKnown RBP12.65□□□□□ -0.38
ERBB3-214ENST00000550070 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 MCM10Q7L590 875 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 PPP1R9BQ96SB3 815 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 MEIS3Q99687 375 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 NRXN3Q9Y4C0 1643 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 C3P01024 1663 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 CCDC173Q0VFZ6 552 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 LMBRD1Q9NUN5 540 aa12.65□□□□□ -0.38
ERBB3-214ENST00000550070 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
ERBB3-214ENST00000550070 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
ERBB3-214ENST00000550070 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
ERBB3-214ENST00000550070 ZNF445P59923 1031 aa12.63□□□□□ -0.39
ERBB3-214ENST00000550070 CAVIN1Q6NZI2 390 aaKnown RBP12.63□□□□□ -0.39
ERBB3-214ENST00000550070 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
ERBB3-214ENST00000550070 KIAA0232Q92628 1395 aa12.63□□□□□ -0.39
ERBB3-214ENST00000550070 PTPRCP08575 1304 aa12.62□□□□□ -0.39
ERBB3-214ENST00000550070 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
ERBB3-214ENST00000550070 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
ERBB3-214ENST00000550070 ZDHHC9Q9Y397 364 aa12.62□□□□□ -0.39
ERBB3-214ENST00000550070 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
ERBB3-214ENST00000550070 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
ERBB3-214ENST00000550070 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
ERBB3-214ENST00000550070 CWC22Q9HCG8 908 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms