RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 KRT28Q7Z3Y7 464 aa9.63□□□□□ -0.87
TMEM116-208ENST00000549537 KCTD12Q96CX2 325 aaKnown RBP9.63□□□□□ -0.87
TMEM116-208ENST00000549537 ATP7BP35670 1465 aa9.63□□□□□ -0.87
TMEM116-208ENST00000549537 BCL9LQ86UU0 1499 aa9.63□□□□□ -0.87
TMEM116-208ENST00000549537 ALS2Q96Q42 1657 aa9.63□□□□□ -0.87
TMEM116-208ENST00000549537 RGS12O14924 1447 aa9.63□□□□□ -0.87
TMEM116-208ENST00000549537 EIF3AQ14152 1382 aaKnown RBP9.63□□□□□ -0.87
TMEM116-208ENST00000549537 TOPAZ1Q8N9V7 1692 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 RXRBP28702 533 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 L3MBTL2Q969R5 705 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 NGLY1Q96IV0 654 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 SIN3AQ96ST3 1273 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 TRPM1Q7Z4N2 1603 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 ATRNO75882 1429 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 ITSN1Q15811 1721 aa9.62□□□□□ -0.87
TMEM116-208ENST00000549537 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
TMEM116-208ENST00000549537 PMFBP1Q8TBY8 1022 aa9.61□□□□□ -0.87
TMEM116-208ENST00000549537 KCNK17Q96T54 332 aa9.61□□□□□ -0.87
TMEM116-208ENST00000549537 QTRT2Q9H974 415 aaKnown RBP9.61□□□□□ -0.87
TMEM116-208ENST00000549537 SLIT2O94813 1529 aa9.61□□□□□ -0.87
TMEM116-208ENST00000549537 CRYBG1Q9Y4K1 1723 aa9.6□□□□□ -0.87
TMEM116-208ENST00000549537 RBM6P78332 1123 aaKnown RBP9.6□□□□□ -0.87
TMEM116-208ENST00000549537 PSME1Q06323 249 aa9.6□□□□□ -0.87
TMEM116-208ENST00000549537 SLC4A5Q9BY07 1137 aa9.6□□□□□ -0.87
TMEM116-208ENST00000549537 QRICH2Q9H0J4 1663 aa9.59□□□□□ -0.87
TMEM116-208ENST00000549537 USP21Q9UK80 565 aa9.59□□□□□ -0.87
TMEM116-208ENST00000549537 ARHGEF10O15013 1369 aa9.59□□□□□ -0.87
TMEM116-208ENST00000549537 OXER1Q8TDS5 423 aa9.58□□□□□ -0.88
TMEM116-208ENST00000549537 NUDT16Q96DE0 195 aaKnown RBP9.58□□□□□ -0.88
TMEM116-208ENST00000549537 CDK19Q9BWU1 502 aa9.58□□□□□ -0.88
TMEM116-208ENST00000549537 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
TMEM116-208ENST00000549537 POLR3AO14802 1390 aaPredicted RBP9.58□□□□□ -0.88
TMEM116-208ENST00000549537 PLCH1Q4KWH8 1693 aa9.58□□□□□ -0.88
TMEM116-208ENST00000549537 NWD2Q9ULI1 1742 aa9.57□□□□□ -0.88
TMEM116-208ENST00000549537 RGS20O76081 388 aa9.57□□□□□ -0.88
TMEM116-208ENST00000549537 CABLES1Q8TDN4 633 aa9.57□□□□□ -0.88
TMEM116-208ENST00000549537 BCL2L12Q9HB09 334 aa9.57□□□□□ -0.88
TMEM116-208ENST00000549537 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
TMEM116-208ENST00000549537 GLI3P10071 1580 aa9.57□□□□□ -0.88
TMEM116-208ENST00000549537 CENPJQ9HC77 1338 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-208ENST00000549537 GPRASP1Q5JY77 1395 aa9.56□□□□□ -0.88
TMEM116-208ENST00000549537 NEUROD1Q13562 356 aa9.56□□□□□ -0.88
TMEM116-208ENST00000549537 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
TMEM116-208ENST00000549537 ZNF454Q8N9F8 522 aa9.56□□□□□ -0.88
TMEM116-208ENST00000549537 NRAPQ86VF7 1730 aa9.56□□□□□ -0.88
TMEM116-208ENST00000549537 RALGAPBQ86X10 1494 aa9.55□□□□□ -0.88
TMEM116-208ENST00000549537 PLEKHG3A1L390 1219 aa9.55□□□□□ -0.88
TMEM116-208ENST00000549537 PTPREP23469 700 aa9.55□□□□□ -0.88
TMEM116-208ENST00000549537 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
TMEM116-208ENST00000549537 NBPF8Q3BBV2 869 aa9.55□□□□□ -0.88
TMEM116-208ENST00000549537 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
TMEM116-208ENST00000549537 NGDNQ8NEJ9 315 aaKnown RBP9.55□□□□□ -0.88
TMEM116-208ENST00000549537 PHRF1Q9P1Y6 1649 aaKnown RBP9.54□□□□□ -0.88
TMEM116-208ENST00000549537 GOLGA8CPA6NN73 597 aa9.54□□□□□ -0.88
TMEM116-208ENST00000549537 IFFO2Q5TF58 517 aa9.54□□□□□ -0.88
TMEM116-208ENST00000549537 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
TMEM116-208ENST00000549537 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
TMEM116-208ENST00000549537 COL14A1Q05707 1796 aaKnown RBP9.54□□□□□ -0.88
TMEM116-208ENST00000549537 ACEP12821 1306 aa9.54□□□□□ -0.88
TMEM116-208ENST00000549537 ROCK2O75116 1388 aaKnown RBP9.53□□□□□ -0.88
TMEM116-208ENST00000549537 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
TMEM116-208ENST00000549537 PDE4AP27815 886 aa9.53□□□□□ -0.88
TMEM116-208ENST00000549537 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
TMEM116-208ENST00000549537 PPIP5K1Q6PFW1 1433 aa9.53□□□□□ -0.88
TMEM116-208ENST00000549537 BRWD3Q6RI45 1802 aa9.52□□□□□ -0.89
TMEM116-208ENST00000549537 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
TMEM116-208ENST00000549537 PTPN5P54829 565 aa9.52□□□□□ -0.89
TMEM116-208ENST00000549537 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
TMEM116-208ENST00000549537 CRISPLD2Q9H0B8 497 aa9.52□□□□□ -0.89
TMEM116-208ENST00000549537 NRKQ7Z2Y5 1582 aa9.51□□□□□ -0.89
TMEM116-208ENST00000549537 SSH2Q76I76 1423 aa9.51□□□□□ -0.89
TMEM116-208ENST00000549537 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
TMEM116-208ENST00000549537 VPS72Q15906 364 aa9.51□□□□□ -0.89
TMEM116-208ENST00000549537 ERICH6Q7L0X2 663 aa9.51□□□□□ -0.89
TMEM116-208ENST00000549537 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
TMEM116-208ENST00000549537 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
TMEM116-208ENST00000549537 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-208ENST00000549537 FOSBP53539 338 aa9.5□□□□□ -0.89
TMEM116-208ENST00000549537 USP19O94966 1318 aa9.5□□□□□ -0.89
TMEM116-208ENST00000549537 BRD4O60885 1362 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-208ENST00000549537 LRP5O75197 1615 aa9.49□□□□□ -0.89
TMEM116-208ENST00000549537 USP6P35125 1406 aa9.49□□□□□ -0.89
TMEM116-208ENST00000549537 BHMG1C9JSJ3 638 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-208ENST00000549537 MRPL50Q8N5N7 158 aaKnown RBP9.49□□□□□ -0.89
TMEM116-208ENST00000549537 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
TMEM116-208ENST00000549537 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-208ENST00000549537 AKAP12Q02952 1782 aa9.49□□□□□ -0.89
TMEM116-208ENST00000549537 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
TMEM116-208ENST00000549537 KIAA0232Q92628 1395 aa9.49□□□□□ -0.89
TMEM116-208ENST00000549537 TONSLQ96HA7 1378 aa9.49□□□□□ -0.89
TMEM116-208ENST00000549537 PIK3C2AO00443 1686 aa9.48□□□□□ -0.89
TMEM116-208ENST00000549537 LMO7Q8WWI1 1683 aa9.48□□□□□ -0.89
TMEM116-208ENST00000549537 THSD4Q6ZMP0 1018 aa9.48□□□□□ -0.89
TMEM116-208ENST00000549537 BTG4Q9NY30 223 aa9.48□□□□□ -0.89
TMEM116-208ENST00000549537 CABP1Q9NZU7 370 aa9.48□□□□□ -0.89
TMEM116-208ENST00000549537 SLIT3O75094 1523 aa9.47□□□□□ -0.89
TMEM116-208ENST00000549537 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
TMEM116-208ENST00000549537 WNT2BQ93097 391 aa9.47□□□□□ -0.89
TMEM116-208ENST00000549537 ZDHHC16Q969W1 377 aa9.47□□□□□ -0.89
TMEM116-208ENST00000549537 THSD7AQ9UPZ6 1657 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms