RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 ZNF445P59923 1031 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 CEP85Q6P2H3 762 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 CPS1P31327 1500 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 CHL1O00533 1208 aa12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 ST18O60284 1047 aa12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 C16orf71Q8IYS4 520 aaPredicted RBP12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 AGLP35573 1532 aa12.17□□□□□ -0.46
SMARCD1-205ENST00000548573 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
SMARCD1-205ENST00000548573 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
SMARCD1-205ENST00000548573 SDSP20132 328 aa12.16□□□□□ -0.46
SMARCD1-205ENST00000548573 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
SMARCD1-205ENST00000548573 RRS1Q15050 365 aaKnown RBP12.16□□□□□ -0.46
SMARCD1-205ENST00000548573 NUDT16Q96DE0 195 aaKnown RBP12.16□□□□□ -0.46
SMARCD1-205ENST00000548573 ITSN1Q15811 1721 aa12.16□□□□□ -0.46
SMARCD1-205ENST00000548573 REC8O95072 547 aa12.15□□□□□ -0.46
SMARCD1-205ENST00000548573 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
SMARCD1-205ENST00000548573 MCTP1Q6DN14 999 aa12.15□□□□□ -0.46
SMARCD1-205ENST00000548573 MSH6P52701 1360 aa12.15□□□□□ -0.46
SMARCD1-205ENST00000548573 TECPR2O15040 1411 aa12.14□□□□□ -0.47
SMARCD1-205ENST00000548573 RRP9O43818 475 aaKnown RBP12.14□□□□□ -0.47
SMARCD1-205ENST00000548573 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
SMARCD1-205ENST00000548573 ZSCAN30Q86W11 494 aa12.14□□□□□ -0.47
SMARCD1-205ENST00000548573 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMARCD1-205ENST00000548573 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
SMARCD1-205ENST00000548573 ERC2O15083 957 aa12.13□□□□□ -0.47
SMARCD1-205ENST00000548573 HMMRO75330 724 aa12.13□□□□□ -0.47
SMARCD1-205ENST00000548573 TPM2P07951 284 aa12.13□□□□□ -0.47
SMARCD1-205ENST00000548573 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
SMARCD1-205ENST00000548573 ZSCAN23Q3MJ62 389 aa12.13□□□□□ -0.47
SMARCD1-205ENST00000548573 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
SMARCD1-205ENST00000548573 METP08581 1390 aa12.12□□□□□ -0.47
SMARCD1-205ENST00000548573 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
SMARCD1-205ENST00000548573 AK9Q5TCS8 1911 aa12.12□□□□□ -0.47
SMARCD1-205ENST00000548573 MEIS3Q99687 375 aa12.12□□□□□ -0.47
SMARCD1-205ENST00000548573 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 PKP1Q13835 747 aa12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 AEBP1Q8IUX7 1158 aa12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 CRB1P82279 1406 aa12.11□□□□□ -0.47
SMARCD1-205ENST00000548573 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 MSNP26038 577 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 MCM2P49736 904 aa12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 PDLIM2Q96JY6 352 aa12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 ZDHHC9Q9Y397 364 aa12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 OVOS2A0A0J9YW53 1432 aa12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 OVOS2Q6IE36 1432 aa12.1□□□□□ -0.47
SMARCD1-205ENST00000548573 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 CCT4P50991 539 aaKnown RBP12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 PDE1AP54750 535 aa12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 MCM10Q7L590 875 aa12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 NALCNQ8IZF0 1738 aa12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 PRPF40AO75400 957 aaKnown RBP12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 TERF1P54274 439 aa12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 TTC21BQ7Z4L5 1316 aa12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
SMARCD1-205ENST00000548573 OFD1O75665 1012 aa12.08□□□□□ -0.48
SMARCD1-205ENST00000548573 GPT2Q8TD30 523 aa12.08□□□□□ -0.48
SMARCD1-205ENST00000548573 RBSNQ9H1K0 784 aa12.08□□□□□ -0.48
SMARCD1-205ENST00000548573 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
SMARCD1-205ENST00000548573 APBB1O00213 710 aa12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 HDGFP51858 240 aaKnown RBP12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 SALL3Q9BXA9 1300 aa12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 PEAK1Q9H792 1746 aa12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 USP31Q70CQ4 1352 aa12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 TOPAZ1Q8N9V7 1692 aa12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
SMARCD1-205ENST00000548573 MBD3O95983 291 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 GNAI2P04899 355 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 ANAPC15P60006 121 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 CUL4AQ13619 759 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 LRSAM1Q6UWE0 723 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 IL17RAQ96F46 866 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 SSH2Q76I76 1423 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 ZNF500O60304 480 aaPredicted RBP12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 MCCP23508 829 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 NEK4P51957 841 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 KIAA1211Q6ZU35 1233 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 INTS4Q96HW7 963 aaKnown RBP12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
SMARCD1-205ENST00000548573 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
SMARCD1-205ENST00000548573 BRD1O95696 1058 aa12.05□□□□□ -0.48
SMARCD1-205ENST00000548573 HSP90AB2PQ58FF8 381 aa12.05□□□□□ -0.48
SMARCD1-205ENST00000548573 USP6P35125 1406 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms