RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
SNHG1-225ENST00000545920 TMUB1Q9BVT8 246 aa8.24□□□□□ -1.09
SNHG1-225ENST00000545920 RWDD1Q9H446 243 aaPredicted RBP8.24□□□□□ -1.09
SNHG1-225ENST00000545920 ABCA6Q8N139 1617 aa8.24□□□□□ -1.09
SNHG1-225ENST00000545920 IQSEC2Q5JU85 1478 aa8.24□□□□□ -1.09
SNHG1-225ENST00000545920 ZNF518AQ6AHZ1 1483 aa8.24□□□□□ -1.09
SNHG1-225ENST00000545920 ABCC11Q96J66 1382 aa8.23□□□□□ -1.09
SNHG1-225ENST00000545920 IFT172Q9UG01 1749 aa8.23□□□□□ -1.09
SNHG1-225ENST00000545920 CFAP74Q9C0B2 1584 aa8.23□□□□□ -1.09
SNHG1-225ENST00000545920 MROH1Q8NDA8 1641 aa8.23□□□□□ -1.09
SNHG1-225ENST00000545920 L1TD1Q5T7N2 865 aaKnown RBP8.23□□□□□ -1.09
SNHG1-225ENST00000545920 SLC4A5Q9BY07 1137 aa8.23□□□□□ -1.09
SNHG1-225ENST00000545920 PNNQ9H307 717 aaKnown RBP8.23□□□□□ -1.09
SNHG1-225ENST00000545920 CHMP4BQ9H444 224 aaKnown RBP8.23□□□□□ -1.09
SNHG1-225ENST00000545920 C14orf93Q9H972 538 aaKnown RBP8.23□□□□□ -1.09
SNHG1-225ENST00000545920 ISY1Q9ULR0 285 aaKnown RBP8.23□□□□□ -1.09
SNHG1-225ENST00000545920 IL16Q14005 1332 aa8.23□□□□□ -1.09
SNHG1-225ENST00000545920 KIF1BO60333 1816 aa8.22□□□□□ -1.09
SNHG1-225ENST00000545920 ZFYVE9O95405 1425 aa8.22□□□□□ -1.09
SNHG1-225ENST00000545920 MED14O60244 1454 aa8.22□□□□□ -1.09
SNHG1-225ENST00000545920 CANXP27824 592 aaKnown RBP8.22□□□□□ -1.09
SNHG1-225ENST00000545920 MORC1Q86VD1 984 aa8.22□□□□□ -1.09
SNHG1-225ENST00000545920 ZNF428Q96B54 188 aa8.22□□□□□ -1.09
SNHG1-225ENST00000545920 NPDC1Q9NQX5 325 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-225ENST00000545920 MLH3Q9UHC1 1453 aa8.21□□□□□ -1.09
SNHG1-225ENST00000545920 KIF3BO15066 747 aa8.21□□□□□ -1.1
SNHG1-225ENST00000545920 PTMSP20962 102 aa8.21□□□□□ -1.1
SNHG1-225ENST00000545920 RARSP54136 660 aaKnown RBP8.21□□□□□ -1.1
SNHG1-225ENST00000545920 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.1
SNHG1-225ENST00000545920 C1orf115Q9H7X2 142 aa8.21□□□□□ -1.1
SNHG1-225ENST00000545920 ANKRD36BQ8N2N9 1353 aa8.21□□□□□ -1.1
SNHG1-225ENST00000545920 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 VIRMAQ69YN4 1812 aaKnown RBP8.2□□□□□ -1.1
SNHG1-225ENST00000545920 PTPN5P54829 565 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-225ENST00000545920 CFAP70Q5T0N1 1121 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 FAM43AQ8N2R8 423 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 AFAP1Q8N556 730 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 REPIN1Q9BWE0 567 aaKnown RBP8.2□□□□□ -1.1
SNHG1-225ENST00000545920 CARD14Q9BXL6 1004 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 EVC2Q86UK5 1308 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 ARHGAP31Q2M1Z3 1444 aa8.2□□□□□ -1.1
SNHG1-225ENST00000545920 ADGRB1O14514 1584 aa8.19□□□□□ -1.1
SNHG1-225ENST00000545920 HDAC1Q13547 482 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-225ENST00000545920 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
SNHG1-225ENST00000545920 EPAS1Q99814 870 aa8.19□□□□□ -1.1
SNHG1-225ENST00000545920 BCL2L12Q9HB09 334 aa8.19□□□□□ -1.1
SNHG1-225ENST00000545920 ADGRF5Q8IZF2 1346 aa8.19□□□□□ -1.1
SNHG1-225ENST00000545920 KIF16BQ96L93 1317 aa8.19□□□□□ -1.1
SNHG1-225ENST00000545920 ADGRB2O60241 1585 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 ERCC6L2Q5T890 1561 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 A6NJR5 290 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 BCAR3O75815 825 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 PHF14O94880 888 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 RGS3P49796 1198 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 EN1Q05925 392 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-225ENST00000545920 SH3D19Q5HYK7 790 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 USP19O94966 1318 aa8.18□□□□□ -1.1
SNHG1-225ENST00000545920 ZC3H13Q5T200 1668 aaKnown RBP8.18□□□□□ -1.1
SNHG1-225ENST00000545920 BHMG1C9JSJ3 638 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-225ENST00000545920 IPO8O15397 1037 aaKnown RBP8.17□□□□□ -1.1
SNHG1-225ENST00000545920 IGHDP01880 384 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 MVPQ14764 893 aaKnown RBP8.17□□□□□ -1.1
SNHG1-225ENST00000545920 ZKSCAN2Q63HK3 967 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 THSD4Q6ZMP0 1018 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 CCDC146Q8IYE0 955 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 FRAT1Q92837 279 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-225ENST00000545920 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-225ENST00000545920 DDX19BQ9UMR2 479 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 ATAD2Q6PL18 1390 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 NOS1P29475 1434 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 NLRP1Q9C000 1473 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 SHPRHQ149N8 1683 aa8.17□□□□□ -1.1
SNHG1-225ENST00000545920 PPRC1Q5VV67 1664 aaKnown RBP8.17□□□□□ -1.1
SNHG1-225ENST00000545920 SENP3-EIF4A1A0A087X0R7 540 aa8.16□□□□□ -1.1
SNHG1-225ENST00000545920 CLCN1P35523 988 aa8.16□□□□□ -1.1
SNHG1-225ENST00000545920 POGZQ7Z3K3 1410 aa8.16□□□□□ -1.1
SNHG1-225ENST00000545920 IRX2Q9BZI1 471 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-225ENST00000545920 CDHR5Q9HBB8 845 aa8.16□□□□□ -1.1
SNHG1-225ENST00000545920 REREQ9P2R6 1566 aa8.16□□□□□ -1.1
SNHG1-225ENST00000545920 HECW2Q9P2P5 1572 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 NPATQ14207 1427 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 ASXL2Q76L83 1435 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 A0A0G2JS52 829 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 CALD1Q05682 793 aaKnown RBP8.15□□□□□ -1.1
SNHG1-225ENST00000545920 ALDH1L2Q3SY69 923 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 DZIP1LQ8IYY4 767 aaKnown RBP8.15□□□□□ -1.1
SNHG1-225ENST00000545920 ANTXR1Q9H6X2 564 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 SLC52A1Q9NWF4 448 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 COG6Q9Y2V7 657 aa8.15□□□□□ -1.1
SNHG1-225ENST00000545920 PPLO60437 1756 aa8.15□□□□□ -1.11
SNHG1-225ENST00000545920 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.11
SNHG1-225ENST00000545920 ABCC3O15438 1527 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 NEO1Q92859 1461 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 PPIP5K1Q6PFW1 1433 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 FRAT2O75474 233 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-225ENST00000545920 PTPREP23469 700 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 FOSBP53539 338 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 847.5 ms