RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CLDN10P78369 228 aa10.75□□□□□ -0.69
COPA-206ENST00000545266 PTK7Q13308 1070 aa10.75□□□□□ -0.69
COPA-206ENST00000545266 Q6ZVU0 165 aa10.75□□□□□ -0.69
COPA-206ENST00000545266 HPS1Q92902 700 aa10.75□□□□□ -0.69
COPA-206ENST00000545266 MYCP01106 439 aaPredicted RBP10.74□□□□□ -0.69
COPA-206ENST00000545266 AVPP01185 164 aa10.74□□□□□ -0.69
COPA-206ENST00000545266 TIMP2P16035 220 aa10.74□□□□□ -0.69
COPA-206ENST00000545266 LARGE2Q8N3Y3 721 aa10.74□□□□□ -0.69
COPA-206ENST00000545266 ATP1A2P50993 1020 aa10.73□□□□□ -0.69
COPA-206ENST00000545266 GTF2IP78347 998 aa10.73□□□□□ -0.69
COPA-206ENST00000545266 CRTC2Q53ET0 693 aaPredicted RBP10.73□□□□□ -0.69
COPA-206ENST00000545266 SIX5Q8N196 739 aa10.73□□□□□ -0.69
COPA-206ENST00000545266 OGFOD1Q8N543 542 aa10.73□□□□□ -0.69
COPA-206ENST00000545266 ITPKCQ96DU7 683 aa10.73□□□□□ -0.69
COPA-206ENST00000545266 CYLDQ9NQC7 956 aa10.73□□□□□ -0.69
COPA-206ENST00000545266 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
COPA-206ENST00000545266 NRG2O14511 850 aaPredicted RBP10.72□□□□□ -0.69
COPA-206ENST00000545266 RASA1P20936 1047 aa10.72□□□□□ -0.69
COPA-206ENST00000545266 USP17L15C9J2P7 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L10C9JJH3 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L13C9JLJ4 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L12C9JPN9 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L11C9JVI0 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L21D6R901 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L18D6R9N7 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L22D6RA61 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L17D6RBQ6 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L19D6RCP7 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L20D6RJB6 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 ZIC2O95409 532 aaPredicted RBP10.71□□□□□ -0.69
COPA-206ENST00000545266 WDR4P57081 412 aaKnown RBP10.71□□□□□ -0.69
COPA-206ENST00000545266 USP17L24Q0WX57 530 aa10.71□□□□□ -0.69
COPA-206ENST00000545266 KDF1Q8NAX2 398 aaPredicted RBP10.71□□□□□ -0.69
COPA-206ENST00000545266 DNAAF2Q9NVR5 837 aaKnown RBP10.71□□□□□ -0.69
COPA-206ENST00000545266 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
COPA-206ENST00000545266 DGAT1O75907 488 aa10.7□□□□□ -0.7
COPA-206ENST00000545266 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
COPA-206ENST00000545266 LARP1Q6PKG0 1096 aaKnown RBP10.7□□□□□ -0.7
COPA-206ENST00000545266 KIAA1024Q9UPX6 916 aa10.7□□□□□ -0.7
COPA-206ENST00000545266 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
COPA-206ENST00000545266 LAPTM4AQ15012 233 aa10.69□□□□□ -0.7
COPA-206ENST00000545266 CYP2U1Q7Z449 544 aa10.69□□□□□ -0.7
COPA-206ENST00000545266 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
COPA-206ENST00000545266 ZMIZ1Q9ULJ6 1067 aa10.69□□□□□ -0.7
COPA-206ENST00000545266 GFRA3O60609 400 aa10.68□□□□□ -0.7
COPA-206ENST00000545266 GNRH1P01148 92 aa10.68□□□□□ -0.7
COPA-206ENST00000545266 ADH1AP07327 375 aa10.68□□□□□ -0.7
COPA-206ENST00000545266 ANKMY2Q8IV38 441 aa10.68□□□□□ -0.7
COPA-206ENST00000545266 SCNN1DP51172 638 aa10.67□□□□□ -0.7
COPA-206ENST00000545266 CCDC102BQ68D86 513 aa10.67□□□□□ -0.7
COPA-206ENST00000545266 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
COPA-206ENST00000545266 CRIPAKQ8N1N5 446 aa10.67□□□□□ -0.7
COPA-206ENST00000545266 MEIOBQ8N635 442 aa10.67□□□□□ -0.7
COPA-206ENST00000545266 M0R2N6 131 aa10.66□□□□□ -0.7
COPA-206ENST00000545266 CBLBQ13191 982 aa10.66□□□□□ -0.7
COPA-206ENST00000545266 RETREG2Q8NC44 543 aa10.66□□□□□ -0.7
COPA-206ENST00000545266 ESF1Q9H501 851 aaKnown RBP10.66□□□□□ -0.7
COPA-206ENST00000545266 NOVA2Q9UNW9 492 aaKnown RBP10.66□□□□□ -0.7
COPA-206ENST00000545266 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
COPA-206ENST00000545266 FAM187AA6NFU0 413 aa10.65□□□□□ -0.7
COPA-206ENST00000545266 TMEM88BA6NKF7 163 aa10.65□□□□□ -0.7
COPA-206ENST00000545266 TMEM229AB2RXF0 380 aa10.65□□□□□ -0.7
COPA-206ENST00000545266 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
COPA-206ENST00000545266 CTC1Q2NKJ3 1217 aa10.65□□□□□ -0.7
COPA-206ENST00000545266 HRH3Q9Y5N1 445 aa10.65□□□□□ -0.7
COPA-206ENST00000545266 CAPN5O15484 640 aaPredicted RBP10.64□□□□□ -0.71
COPA-206ENST00000545266 DPYDQ12882 1025 aa10.64□□□□□ -0.71
COPA-206ENST00000545266 XAGE2Q96GT9 111 aa10.64□□□□□ -0.71
COPA-206ENST00000545266 ZNF594Q96JF6 807 aaPredicted RBP10.64□□□□□ -0.71
COPA-206ENST00000545266 SLC4A9Q96Q91 983 aa10.64□□□□□ -0.71
COPA-206ENST00000545266 INHAP05111 366 aa10.63□□□□□ -0.71
COPA-206ENST00000545266 PTGIRP43119 386 aa10.63□□□□□ -0.71
COPA-206ENST00000545266 TPCN2Q8NHX9 752 aa10.63□□□□□ -0.71
COPA-206ENST00000545266 STK32AQ8WU08 396 aa10.63□□□□□ -0.71
COPA-206ENST00000545266 CSB-PGBD3P0DP91 1061 aa10.62□□□□□ -0.71
COPA-206ENST00000545266 SEC13P55735 322 aa10.62□□□□□ -0.71
COPA-206ENST00000545266 PDE4CQ08493 712 aa10.62□□□□□ -0.71
COPA-206ENST00000545266 TMEM164Q5U3C3 297 aa10.62□□□□□ -0.71
COPA-206ENST00000545266 FAM200AQ8TCP9 573 aa10.62□□□□□ -0.71
COPA-206ENST00000545266 ETNK1Q9HBU6 452 aa10.62□□□□□ -0.71
COPA-206ENST00000545266 GDF10P55107 478 aa10.61□□□□□ -0.71
COPA-206ENST00000545266 CLN3Q13286 438 aa10.61□□□□□ -0.71
COPA-206ENST00000545266 TSEN34Q9BSV6 310 aaKnown RBP10.61□□□□□ -0.71
COPA-206ENST00000545266 TRAIPQ9BWF2 469 aa10.61□□□□□ -0.71
COPA-206ENST00000545266 A0A1W2PRU2 124 aa10.6□□□□□ -0.71
COPA-206ENST00000545266 IL2RAP01589 272 aa10.6□□□□□ -0.71
COPA-206ENST00000545266 PSME1Q06323 249 aa10.6□□□□□ -0.71
COPA-206ENST00000545266 SWI5Q1ZZU3 235 aa10.6□□□□□ -0.71
COPA-206ENST00000545266 PKDCCQ504Y2 493 aa10.6□□□□□ -0.71
COPA-206ENST00000545266 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
COPA-206ENST00000545266 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
COPA-206ENST00000545266 STAU1O95793 577 aaKnown RBP10.59□□□□□ -0.71
COPA-206ENST00000545266 EPHA4P54764 986 aa10.59□□□□□ -0.71
COPA-206ENST00000545266 AGBL1Q96MI9 1066 aa10.59□□□□□ -0.71
COPA-206ENST00000545266 ESYT1Q9BSJ8 1104 aa10.59□□□□□ -0.71
COPA-206ENST00000545266 SFI1A8K8P3 1242 aa10.58□□□□□ -0.72
COPA-206ENST00000545266 BACH1O14867 736 aa10.58□□□□□ -0.72
COPA-206ENST00000545266 SPINT1O43278 529 aa10.58□□□□□ -0.72
COPA-206ENST00000545266 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.58□□□□□ -0.72
COPA-206ENST00000545266 ARHGEF10LQ9HCE6 1279 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms