RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 EYA1Q99502 592 aa20.26■□□□□ 0.83
SCNN1A-221ENST00000543768 KIF24Q5T7B8 1368 aa20.26■□□□□ 0.83
SCNN1A-221ENST00000543768 FOXO3O43524 673 aa20.26■□□□□ 0.83
SCNN1A-221ENST00000543768 GCC1Q96CN9 775 aa20.26■□□□□ 0.83
SCNN1A-221ENST00000543768 USP54Q70EL1 1684 aa20.25■□□□□ 0.83
SCNN1A-221ENST00000543768 HAP1P54257 671 aaPredicted RBP20.24■□□□□ 0.83
SCNN1A-221ENST00000543768 CHD2O14647 1828 aaKnown RBP20.24■□□□□ 0.83
SCNN1A-221ENST00000543768 RGS12O14924 1447 aa20.24■□□□□ 0.83
SCNN1A-221ENST00000543768 BECN1Q14457 450 aa20.23■□□□□ 0.83
SCNN1A-221ENST00000543768 INTS3Q68E01 1043 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-221ENST00000543768 IL27Q8NEV9 243 aa20.22■□□□□ 0.83
SCNN1A-221ENST00000543768 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
SCNN1A-221ENST00000543768 NUTM2GQ5VZR2 741 aa20.21■□□□□ 0.83
SCNN1A-221ENST00000543768 MIS18AQ9NYP9 233 aa20.21■□□□□ 0.83
SCNN1A-221ENST00000543768 HOXC9P31274 260 aa20.2■□□□□ 0.82
SCNN1A-221ENST00000543768 MFAP1P55081 439 aaKnown RBP20.2■□□□□ 0.82
SCNN1A-221ENST00000543768 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
SCNN1A-221ENST00000543768 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
SCNN1A-221ENST00000543768 NWD1Q149M9 1564 aa20.19■□□□□ 0.82
SCNN1A-221ENST00000543768 ANKLE2Q86XL3 938 aa20.19■□□□□ 0.82
SCNN1A-221ENST00000543768 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
SCNN1A-221ENST00000543768 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
SCNN1A-221ENST00000543768 TBC1D2Q9BYX2 928 aa20.18■□□□□ 0.82
SCNN1A-221ENST00000543768 ZNF142P52746 1687 aaPredicted RBP20.18■□□□□ 0.82
SCNN1A-221ENST00000543768 PTPRCP08575 1304 aa20.18■□□□□ 0.82
SCNN1A-221ENST00000543768 BMP2KLQ5H9B9 411 aa20.17■□□□□ 0.82
SCNN1A-221ENST00000543768 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
SCNN1A-221ENST00000543768 PHF8Q9UPP1 1060 aa20.16■□□□□ 0.82
SCNN1A-221ENST00000543768 LRRC37A3O60309 1634 aa20.16■□□□□ 0.82
SCNN1A-221ENST00000543768 HTATSF1O43719 755 aaKnown RBP20.15■□□□□ 0.82
SCNN1A-221ENST00000543768 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
SCNN1A-221ENST00000543768 ATP10DQ9P241 1426 aa20.15■□□□□ 0.82
SCNN1A-221ENST00000543768 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.82
SCNN1A-221ENST00000543768 DCTPP1Q9H773 170 aa20.14■□□□□ 0.82
SCNN1A-221ENST00000543768 FRAT2O75474 233 aaPredicted RBP20.14■□□□□ 0.81
SCNN1A-221ENST00000543768 ANTXR1Q9H6X2 564 aa20.14■□□□□ 0.81
SCNN1A-221ENST00000543768 ANKRD44Q8N8A2 993 aa20.13■□□□□ 0.81
SCNN1A-221ENST00000543768 MSH6P52701 1360 aa20.13■□□□□ 0.81
SCNN1A-221ENST00000543768 LTN1O94822 1766 aa20.13■□□□□ 0.81
SCNN1A-221ENST00000543768 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
SCNN1A-221ENST00000543768 G2E3Q7L622 706 aa20.12■□□□□ 0.81
SCNN1A-221ENST00000543768 SLKQ9H2G2 1235 aaPredicted RBP20.12■□□□□ 0.81
SCNN1A-221ENST00000543768 SETD1BQ9UPS6 1966 aaKnown RBP20.11■□□□□ 0.81
SCNN1A-221ENST00000543768 RTL1A6NKG5 1358 aa20.11■□□□□ 0.81
SCNN1A-221ENST00000543768 ADAMTSL3P82987 1691 aa20.11■□□□□ 0.81
SCNN1A-221ENST00000543768 CEP85Q6P2H3 762 aa20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 C14orf37Q86TY3 774 aa20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 RPAP2Q8IXW5 612 aaPredicted RBP20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 LTV1Q96GA3 475 aaPredicted RBP20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 RBM25P49756 843 aaKnown RBP20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 MEIS3Q99687 375 aa20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 RTN4Q9NQC3 1192 aaKnown RBP20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
SCNN1A-221ENST00000543768 IL17REQ8NFR9 667 aa20.09■□□□□ 0.81
SCNN1A-221ENST00000543768 NFAT5O94916 1531 aa20.09■□□□□ 0.81
SCNN1A-221ENST00000543768 MAP3K5Q99683 1374 aa20.08■□□□□ 0.81
SCNN1A-221ENST00000543768 PLEKHM2Q8IWE5 1019 aa20.08■□□□□ 0.8
SCNN1A-221ENST00000543768 IP6K1Q92551 441 aa20.07■□□□□ 0.8
SCNN1A-221ENST00000543768 F6X3S4 739 aa20.06■□□□□ 0.8
SCNN1A-221ENST00000543768 ESCO1Q5FWF5 840 aa20.06■□□□□ 0.8
SCNN1A-221ENST00000543768 TBC1D9Q6ZT07 1266 aa20.06■□□□□ 0.8
SCNN1A-221ENST00000543768 USHBP1Q8N6Y0 703 aa20.06■□□□□ 0.8
SCNN1A-221ENST00000543768 FAM208AQ9UK61 1670 aaKnown RBP20.06■□□□□ 0.8
SCNN1A-221ENST00000543768 GSPT1P15170 499 aaKnown RBP20.05■□□□□ 0.8
SCNN1A-221ENST00000543768 PSME1Q06323 249 aa20.05■□□□□ 0.8
SCNN1A-221ENST00000543768 CACNA1FO60840 1977 aa20.05■□□□□ 0.8
SCNN1A-221ENST00000543768 GSE1Q14687 1217 aa20.05■□□□□ 0.8
SCNN1A-221ENST00000543768 CCT4P50991 539 aaKnown RBP20.04■□□□□ 0.8
SCNN1A-221ENST00000543768 TAF7Q15545 349 aaPredicted RBP20.04■□□□□ 0.8
SCNN1A-221ENST00000543768 BABAM1Q9NWV8 329 aa20.04■□□□□ 0.8
SCNN1A-221ENST00000543768 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
SCNN1A-221ENST00000543768 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
SCNN1A-221ENST00000543768 STK31Q9BXU1 1019 aa20.03■□□□□ 0.8
SCNN1A-221ENST00000543768 NPHP4O75161 1426 aaPredicted RBP20.03■□□□□ 0.8
SCNN1A-221ENST00000543768 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
SCNN1A-221ENST00000543768 NBPF6Q5VWK0 638 aa20.02■□□□□ 0.8
SCNN1A-221ENST00000543768 NBPF4Q96M43 638 aa20.02■□□□□ 0.8
SCNN1A-221ENST00000543768 PHRF1Q9P1Y6 1649 aaKnown RBP20.02■□□□□ 0.8
SCNN1A-221ENST00000543768 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.8
SCNN1A-221ENST00000543768 RGPD2P0DJD1 1756 aa20.01■□□□□ 0.79
SCNN1A-221ENST00000543768 FLIIQ13045 1269 aa20.01■□□□□ 0.79
SCNN1A-221ENST00000543768 KIF2CQ99661 725 aa20.01■□□□□ 0.79
SCNN1A-221ENST00000543768 TTC22Q5TAA0 569 aa20.01■□□□□ 0.79
SCNN1A-221ENST00000543768 SPRYD3Q8NCJ5 442 aa20.01■□□□□ 0.79
SCNN1A-221ENST00000543768 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
SCNN1A-221ENST00000543768 CDC45O75419 566 aa20■□□□□ 0.79
SCNN1A-221ENST00000543768 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
SCNN1A-221ENST00000543768 OTUD7AQ8TE49 926 aaPredicted RBP20■□□□□ 0.79
SCNN1A-221ENST00000543768 SNX21Q969T3 373 aa20■□□□□ 0.79
SCNN1A-221ENST00000543768 NECTIN2Q92692 538 aa19.99■□□□□ 0.79
SCNN1A-221ENST00000543768 ORAI2Q96SN7 254 aa19.99■□□□□ 0.79
SCNN1A-221ENST00000543768 SMARCA5O60264 1052 aaPredicted RBP19.99■□□□□ 0.79
SCNN1A-221ENST00000543768 HSCBQ8IWL3 235 aa19.99■□□□□ 0.79
SCNN1A-221ENST00000543768 FKBP5Q13451 457 aaPredicted RBP19.98■□□□□ 0.79
SCNN1A-221ENST00000543768 MED1Q15648 1581 aaPredicted RBP19.97■□□□□ 0.79
SCNN1A-221ENST00000543768 HMMRO75330 724 aa19.97■□□□□ 0.79
SCNN1A-221ENST00000543768 N4BP2Q86UW6 1770 aaPredicted RBP19.97■□□□□ 0.79
SCNN1A-221ENST00000543768 GNAI2P04899 355 aa19.97■□□□□ 0.79
SCNN1A-221ENST00000543768 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
SCNN1A-221ENST00000543768 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms