RNA–Protein interactions for RNA: ENST00000543654.1

NPIPB4-218, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-218ENST00000543654 ADAMTS8Q9UP79 889 aa8.73□□□□□ -1.01
NPIPB4-218ENST00000543654 NPHP3Q7Z494 1330 aa8.73□□□□□ -1.01
NPIPB4-218ENST00000543654 DIAPH1O60610 1272 aaKnown RBP8.72□□□□□ -1.01
NPIPB4-218ENST00000543654 ZNF710Q8N1W2 664 aa8.72□□□□□ -1.01
NPIPB4-218ENST00000543654 ABTB2Q8N961 1025 aa8.72□□□□□ -1.01
NPIPB4-218ENST00000543654 KCNH5Q8NCM2 988 aa8.72□□□□□ -1.01
NPIPB4-218ENST00000543654 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
NPIPB4-218ENST00000543654 ZNF335Q9H4Z2 1342 aaPredicted RBP8.72□□□□□ -1.01
NPIPB4-218ENST00000543654 PPM1GO15355 546 aaPredicted RBP8.71□□□□□ -1.02
NPIPB4-218ENST00000543654 DOK7Q18PE1 504 aa8.71□□□□□ -1.02
NPIPB4-218ENST00000543654 HS3ST6Q96QI5 342 aa8.71□□□□□ -1.02
NPIPB4-218ENST00000543654 POLKQ9UBT6 870 aa8.71□□□□□ -1.02
NPIPB4-218ENST00000543654 RTL1A6NKG5 1358 aa8.71□□□□□ -1.02
NPIPB4-218ENST00000543654 COL3A1P02461 1466 aaPredicted RBP8.7□□□□□ -1.02
NPIPB4-218ENST00000543654 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
NPIPB4-218ENST00000543654 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.024e-9■■□□□ 12.5
NPIPB4-218ENST00000543654 RUNDC1Q96C34 613 aa8.7□□□□□ -1.02
NPIPB4-218ENST00000543654 MAPK8IP3Q9UPT6 1336 aa8.7□□□□□ -1.02
NPIPB4-218ENST00000543654 SBNO1A3KN83 1393 aa8.7□□□□□ -1.02
NPIPB4-218ENST00000543654 FLT4P35916 1363 aa8.7□□□□□ -1.02
NPIPB4-218ENST00000543654 USP54Q70EL1 1684 aa8.69□□□□□ -1.02
NPIPB4-218ENST00000543654 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-218ENST00000543654 FOXO3O43524 673 aa8.69□□□□□ -1.02
NPIPB4-218ENST00000543654 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
NPIPB4-218ENST00000543654 KRT28Q7Z3Y7 464 aa8.69□□□□□ -1.02
NPIPB4-218ENST00000543654 ORAI2Q96SN7 254 aa8.69□□□□□ -1.02
NPIPB4-218ENST00000543654 ARHGEF10O15013 1369 aa8.69□□□□□ -1.02
NPIPB4-218ENST00000543654 STRCP1A6NGW2 1772 aa8.68□□□□□ -1.02
NPIPB4-218ENST00000543654 FCHSD2O94868 740 aa8.68□□□□□ -1.02
NPIPB4-218ENST00000543654 AMPHP49418 695 aa8.68□□□□□ -1.02
NPIPB4-218ENST00000543654 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
NPIPB4-218ENST00000543654 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
NPIPB4-218ENST00000543654 PIK3C2AO00443 1686 aa8.68□□□□□ -1.02
NPIPB4-218ENST00000543654 NEFLP07196 543 aa8.67□□□□□ -1.02
NPIPB4-218ENST00000543654 RRS1Q15050 365 aaKnown RBP8.67□□□□□ -1.02
NPIPB4-218ENST00000543654 SHPRHQ149N8 1683 aa8.66□□□□□ -1.02
NPIPB4-218ENST00000543654 TNS3Q68CZ2 1445 aa8.66□□□□□ -1.02
NPIPB4-218ENST00000543654 USP19O94966 1318 aa8.66□□□□□ -1.02
NPIPB4-218ENST00000543654 MAP3K19Q56UN5 1328 aa8.66□□□□□ -1.02
NPIPB4-218ENST00000543654 CCDC146Q8IYE0 955 aa8.66□□□□□ -1.02
NPIPB4-218ENST00000543654 RGPD8O14715 1765 aaPredicted RBP8.66□□□□□ -1.02
NPIPB4-218ENST00000543654 APAF1O14727 1248 aa8.65□□□□□ -1.02
NPIPB4-218ENST00000543654 IL13P35225 146 aa8.65□□□□□ -1.02
NPIPB4-218ENST00000543654 LMOD3Q0VAK6 560 aa8.65□□□□□ -1.02
NPIPB4-218ENST00000543654 CCDC27Q2M243 656 aa8.65□□□□□ -1.02
NPIPB4-218ENST00000543654 LMOD2Q6P5Q4 547 aa8.65□□□□□ -1.02
NPIPB4-218ENST00000543654 BRINP3Q76B58 766 aa8.65□□□□□ -1.02
NPIPB4-218ENST00000543654 SPNS2Q8IVW8 549 aa8.65□□□□□ -1.02
NPIPB4-218ENST00000543654 SLIT3O75094 1523 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 PPP1R37O75864 691 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 CALD1Q05682 793 aaKnown RBP8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 TCP11L2Q8N4U5 519 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 PXDNQ92626 1479 aa8.64□□□□□ -1.03
NPIPB4-218ENST00000543654 ERBB3P21860 1342 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 SPATA31A3Q5VYP0 1347 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 ZNF521Q96K83 1311 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 E9PSI1 815 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 GCP02774 474 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 HOXC9P31274 260 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 XPCQ01831 940 aaPredicted RBP8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 EIF4A2Q14240 407 aaKnown RBP8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 NUTM2GQ5VZR2 741 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 NFAT5O94916 1531 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 ABCC6O95255 1503 aa8.63□□□□□ -1.03
NPIPB4-218ENST00000543654 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 MED1Q15648 1581 aaPredicted RBP8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 PRKAR2BP31323 418 aa8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 GPR153Q6NV75 609 aa8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 IP6K1Q92551 441 aa8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 PLEKHF1Q96S99 279 aa8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 MYH16Q9H6N6 1097 aa8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 TRPM3Q9HCF6 1732 aaPredicted RBP8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
NPIPB4-218ENST00000543654 KIF3CO14782 793 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 FBLN1P23142 703 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 TMPOP42166 694 aaKnown RBP8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 HSP90AB2PQ58FF8 381 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 ARHGEF25Q86VW2 580 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 WWC1Q8IX03 1113 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 PHRF1Q9P1Y6 1649 aaKnown RBP8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 MAP2P11137 1827 aaKnown RBP8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 XIRP1Q702N8 1843 aaKnown RBP8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 KDRP35968 1356 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 PLEKHG2Q9H7P9 1386 aa8.61□□□□□ -1.03
NPIPB4-218ENST00000543654 IL16Q14005 1332 aa8.6□□□□□ -1.03
NPIPB4-218ENST00000543654 IGSF1Q8N6C5 1336 aa8.6□□□□□ -1.03
NPIPB4-218ENST00000543654 ALS2Q96Q42 1657 aa8.6□□□□□ -1.03
NPIPB4-218ENST00000543654 TOM1O60784 492 aa8.6□□□□□ -1.03
NPIPB4-218ENST00000543654 HMOX1P09601 288 aa8.6□□□□□ -1.03
NPIPB4-218ENST00000543654 MMRN1Q13201 1228 aa8.6□□□□□ -1.03
NPIPB4-218ENST00000543654 NFE2L2Q16236 605 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms