RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
PPME1-208ENST00000543525 MCM4P33991 863 aa16.81■□□□□ 0.28
PPME1-208ENST00000543525 NALCNQ8IZF0 1738 aa16.81■□□□□ 0.28
PPME1-208ENST00000543525 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
PPME1-208ENST00000543525 L1TD1Q5T7N2 865 aaKnown RBP16.8■□□□□ 0.28
PPME1-208ENST00000543525 EID1Q9Y6B2 187 aa16.8■□□□□ 0.28
PPME1-208ENST00000543525 TTC21AQ8NDW8 1320 aa16.79■□□□□ 0.28
PPME1-208ENST00000543525 LTKP29376 864 aa16.79■□□□□ 0.28
PPME1-208ENST00000543525 DCTPP1Q9H773 170 aa16.79■□□□□ 0.28
PPME1-208ENST00000543525 PTPRCP08575 1304 aa16.79■□□□□ 0.28
PPME1-208ENST00000543525 ARHGEF10O15013 1369 aa16.79■□□□□ 0.28
PPME1-208ENST00000543525 CDC45O75419 566 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 NCOA3Q9Y6Q9 1424 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 RGPD1P0DJD0 1748 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 MCM10Q7L590 875 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
PPME1-208ENST00000543525 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 PEAK1Q9H792 1746 aa16.78■□□□□ 0.28
PPME1-208ENST00000543525 SSH2Q76I76 1423 aa16.77■□□□□ 0.28
PPME1-208ENST00000543525 NUTM2FA1L443 756 aa16.77■□□□□ 0.28
PPME1-208ENST00000543525 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
PPME1-208ENST00000543525 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
PPME1-208ENST00000543525 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
PPME1-208ENST00000543525 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
PPME1-208ENST00000543525 RGS12O14924 1447 aa16.75■□□□□ 0.27
PPME1-208ENST00000543525 CRB1P82279 1406 aa16.75■□□□□ 0.27
PPME1-208ENST00000543525 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
PPME1-208ENST00000543525 DDX11L8A8MPP1 907 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
PPME1-208ENST00000543525 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 DDIT3P35638 169 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 KRT24Q2M2I5 525 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 TBX22Q9Y458 520 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 FLT4P35916 1363 aa16.74■□□□□ 0.27
PPME1-208ENST00000543525 KIF2CQ99661 725 aa16.73■□□□□ 0.27
PPME1-208ENST00000543525 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
PPME1-208ENST00000543525 TTC22Q5TAA0 569 aa16.72■□□□□ 0.27
PPME1-208ENST00000543525 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
PPME1-208ENST00000543525 ATP10DQ9P241 1426 aa16.72■□□□□ 0.27
PPME1-208ENST00000543525 FMN2Q9NZ56 1722 aa16.72■□□□□ 0.27
PPME1-208ENST00000543525 SLIT1O75093 1534 aa16.72■□□□□ 0.27
PPME1-208ENST00000543525 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
PPME1-208ENST00000543525 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
PPME1-208ENST00000543525 MSH6P52701 1360 aa16.71■□□□□ 0.27
PPME1-208ENST00000543525 SOX12O15370 315 aa16.71■□□□□ 0.27
PPME1-208ENST00000543525 TRAK2O60296 914 aa16.71■□□□□ 0.27
PPME1-208ENST00000543525 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
PPME1-208ENST00000543525 GAS2L2Q8NHY3 880 aa16.71■□□□□ 0.27
PPME1-208ENST00000543525 TSPYL4Q9UJ04 414 aa16.71■□□□□ 0.27
PPME1-208ENST00000543525 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.26
PPME1-208ENST00000543525 K7ELQ4 463 aaPredicted RBP16.7■□□□□ 0.26
PPME1-208ENST00000543525 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
PPME1-208ENST00000543525 AMPHP49418 695 aa16.7■□□□□ 0.26
PPME1-208ENST00000543525 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
PPME1-208ENST00000543525 KDRP35968 1356 aa16.7■□□□□ 0.26
PPME1-208ENST00000543525 HMMRO75330 724 aa16.7■□□□□ 0.26
PPME1-208ENST00000543525 HSP90AA1P07900 732 aaKnown RBP16.7■□□□□ 0.26
PPME1-208ENST00000543525 PTMSP20962 102 aa16.7■□□□□ 0.26
PPME1-208ENST00000543525 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
PPME1-208ENST00000543525 GOLGA6L3A6NEY3 463 aa16.69■□□□□ 0.26
PPME1-208ENST00000543525 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
PPME1-208ENST00000543525 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
PPME1-208ENST00000543525 CASC1Q6TDU7 716 aa16.68■□□□□ 0.26
PPME1-208ENST00000543525 GBP4Q96PP9 640 aa16.68■□□□□ 0.26
PPME1-208ENST00000543525 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
PPME1-208ENST00000543525 MEIS3Q99687 375 aa16.68■□□□□ 0.26
PPME1-208ENST00000543525 FOXO3O43524 673 aa16.67■□□□□ 0.26
PPME1-208ENST00000543525 RAB3GAP1Q15042 981 aa16.67■□□□□ 0.26
PPME1-208ENST00000543525 RABEP1Q15276 862 aa16.67■□□□□ 0.26
PPME1-208ENST00000543525 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
PPME1-208ENST00000543525 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
PPME1-208ENST00000543525 THEMISQ8N1K5 641 aaPredicted RBP16.66■□□□□ 0.26
PPME1-208ENST00000543525 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
PPME1-208ENST00000543525 EYA1Q99502 592 aa16.66■□□□□ 0.26
PPME1-208ENST00000543525 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
PPME1-208ENST00000543525 FSD2A1L4K1 749 aa16.66■□□□□ 0.26
PPME1-208ENST00000543525 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
PPME1-208ENST00000543525 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
PPME1-208ENST00000543525 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.26
PPME1-208ENST00000543525 CD2BP2O95400 341 aaKnown RBP16.64■□□□□ 0.25
PPME1-208ENST00000543525 SKOR2Q2VWA4 1001 aaPredicted RBP16.64■□□□□ 0.25
PPME1-208ENST00000543525 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
PPME1-208ENST00000543525 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
PPME1-208ENST00000543525 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
PPME1-208ENST00000543525 PIK3C2AO00443 1686 aa16.64■□□□□ 0.25
PPME1-208ENST00000543525 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
PPME1-208ENST00000543525 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
PPME1-208ENST00000543525 SDSP20132 328 aa16.63■□□□□ 0.25
PPME1-208ENST00000543525 NLRP6P59044 892 aa16.63■□□□□ 0.25
PPME1-208ENST00000543525 G2E3Q7L622 706 aa16.63■□□□□ 0.25
PPME1-208ENST00000543525 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
PPME1-208ENST00000543525 RGS17Q9UGC6 210 aaPredicted RBP16.63■□□□□ 0.25
PPME1-208ENST00000543525 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
PPME1-208ENST00000543525 GNAI2P04899 355 aa16.62■□□□□ 0.25
PPME1-208ENST00000543525 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
PPME1-208ENST00000543525 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms