RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 PSME1Q06323 249 aa17.67■□□□□ 0.42
PRAME-214ENST00000543184 HSP90AA2PQ14568 343 aaPredicted RBP17.67■□□□□ 0.42
PRAME-214ENST00000543184 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
PRAME-214ENST00000543184 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
PRAME-214ENST00000543184 ZBTB7CA1YPR0 619 aa17.67■□□□□ 0.42
PRAME-214ENST00000543184 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
PRAME-214ENST00000543184 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
PRAME-214ENST00000543184 PKP1Q13835 747 aa17.66■□□□□ 0.42
PRAME-214ENST00000543184 SNX21Q969T3 373 aa17.66■□□□□ 0.42
PRAME-214ENST00000543184 GBP4Q96PP9 640 aa17.66■□□□□ 0.42
PRAME-214ENST00000543184 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
PRAME-214ENST00000543184 SLAIN2Q9P270 581 aa17.65■□□□□ 0.42
PRAME-214ENST00000543184 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
PRAME-214ENST00000543184 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
PRAME-214ENST00000543184 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
PRAME-214ENST00000543184 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
PRAME-214ENST00000543184 K7ELQ4 463 aaPredicted RBP17.64■□□□□ 0.41
PRAME-214ENST00000543184 CT47B1P0C2W7 299 aaPredicted RBP17.64■□□□□ 0.41
PRAME-214ENST00000543184 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
PRAME-214ENST00000543184 BMP2KLQ5H9B9 411 aa17.64■□□□□ 0.41
PRAME-214ENST00000543184 FOXD4L5Q5VV16 416 aaPredicted RBP17.64■□□□□ 0.41
PRAME-214ENST00000543184 FOXD4L4Q8WXT5 416 aaPredicted RBP17.64■□□□□ 0.41
PRAME-214ENST00000543184 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
PRAME-214ENST00000543184 DDX49Q9Y6V7 483 aaKnown RBP17.63■□□□□ 0.41
PRAME-214ENST00000543184 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
PRAME-214ENST00000543184 MCTP1Q6DN14 999 aa17.62■□□□□ 0.41
PRAME-214ENST00000543184 GSPT1P15170 499 aaKnown RBP17.62■□□□□ 0.41
PRAME-214ENST00000543184 VAMP4O75379 141 aa17.62■□□□□ 0.41
PRAME-214ENST00000543184 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
PRAME-214ENST00000543184 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
PRAME-214ENST00000543184 NWD1Q149M9 1564 aa17.61■□□□□ 0.41
PRAME-214ENST00000543184 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
PRAME-214ENST00000543184 USP32Q8NFA0 1604 aa17.61■□□□□ 0.41
PRAME-214ENST00000543184 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
PRAME-214ENST00000543184 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
PRAME-214ENST00000543184 C1orf167Q5SNV9 1468 aa17.6■□□□□ 0.41
PRAME-214ENST00000543184 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
PRAME-214ENST00000543184 SMARCA5O60264 1052 aaPredicted RBP17.6■□□□□ 0.41
PRAME-214ENST00000543184 NASPP49321 788 aaPredicted RBP17.6■□□□□ 0.41
PRAME-214ENST00000543184 NLRP6P59044 892 aa17.6■□□□□ 0.41
PRAME-214ENST00000543184 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
PRAME-214ENST00000543184 C8orf58Q8NAV2 365 aa17.6■□□□□ 0.41
PRAME-214ENST00000543184 BAG4O95429 457 aaKnown RBP17.59■□□□□ 0.41
PRAME-214ENST00000543184 EMILIN1Q9Y6C2 1016 aa17.59■□□□□ 0.41
PRAME-214ENST00000543184 COL3A1P02461 1466 aaPredicted RBP17.59■□□□□ 0.41
PRAME-214ENST00000543184 PLEKHG3A1L390 1219 aa17.59■□□□□ 0.41
PRAME-214ENST00000543184 CAVIN1Q6NZI2 390 aaKnown RBP17.59■□□□□ 0.41
PRAME-214ENST00000543184 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
PRAME-214ENST00000543184 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
PRAME-214ENST00000543184 MBIPQ9NS73 344 aa17.58■□□□□ 0.41
PRAME-214ENST00000543184 MST1RQ04912 1400 aa17.58■□□□□ 0.41
PRAME-214ENST00000543184 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.4
PRAME-214ENST00000543184 ZGPATQ8N5A5 531 aaKnown RBP17.57■□□□□ 0.4
PRAME-214ENST00000543184 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
PRAME-214ENST00000543184 NSD2O96028 1365 aa17.56■□□□□ 0.4
PRAME-214ENST00000543184 IL16Q14005 1332 aa17.56■□□□□ 0.4
PRAME-214ENST00000543184 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
PRAME-214ENST00000543184 ARID3AQ99856 593 aa17.56■□□□□ 0.4
PRAME-214ENST00000543184 ZMYND15Q9H091 742 aa17.56■□□□□ 0.4
PRAME-214ENST00000543184 POLKQ9UBT6 870 aa17.56■□□□□ 0.4
PRAME-214ENST00000543184 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
PRAME-214ENST00000543184 KIAA1211Q6ZU35 1233 aa17.56■□□□□ 0.4
PRAME-214ENST00000543184 CPSF1Q10570 1443 aaKnown RBP17.55■□□□□ 0.4
PRAME-214ENST00000543184 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
PRAME-214ENST00000543184 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
PRAME-214ENST00000543184 PKNOX2Q96KN3 472 aa17.55■□□□□ 0.4
PRAME-214ENST00000543184 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
PRAME-214ENST00000543184 XIRP1Q702N8 1843 aaKnown RBP17.55■□□□□ 0.4
PRAME-214ENST00000543184 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
PRAME-214ENST00000543184 USP6P35125 1406 aa17.55■□□□□ 0.4
PRAME-214ENST00000543184 CDC45O75419 566 aa17.54■□□□□ 0.4
PRAME-214ENST00000543184 TPRNQ4KMQ1 711 aa17.54■□□□□ 0.4
PRAME-214ENST00000543184 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
PRAME-214ENST00000543184 SKOR2Q2VWA4 1001 aaPredicted RBP17.54■□□□□ 0.4
PRAME-214ENST00000543184 COG3Q96JB2 828 aa17.54■□□□□ 0.4
PRAME-214ENST00000543184 FCHSD2O94868 740 aa17.53■□□□□ 0.4
PRAME-214ENST00000543184 FOXD4L6Q3SYB3 417 aaPredicted RBP17.53■□□□□ 0.4
PRAME-214ENST00000543184 FOXD4L3Q6VB84 417 aaPredicted RBP17.53■□□□□ 0.4
PRAME-214ENST00000543184 PRPF40AO75400 957 aaKnown RBP17.53■□□□□ 0.4
PRAME-214ENST00000543184 LTBP4Q8N2S1 1624 aa17.53■□□□□ 0.4
PRAME-214ENST00000543184 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.4
PRAME-214ENST00000543184 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.4
PRAME-214ENST00000543184 GOLGA6L22H0YM25 854 aa17.52■□□□□ 0.4
PRAME-214ENST00000543184 RBSNQ9H1K0 784 aa17.52■□□□□ 0.4
PRAME-214ENST00000543184 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
PRAME-214ENST00000543184 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
PRAME-214ENST00000543184 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
PRAME-214ENST00000543184 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
PRAME-214ENST00000543184 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
PRAME-214ENST00000543184 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
PRAME-214ENST00000543184 MPNDQ8N594 471 aa17.51■□□□□ 0.39
PRAME-214ENST00000543184 RRP9O43818 475 aaKnown RBP17.5■□□□□ 0.39
PRAME-214ENST00000543184 ZSCAN23Q3MJ62 389 aa17.5■□□□□ 0.39
PRAME-214ENST00000543184 KLHL40Q2TBA0 621 aa17.5■□□□□ 0.39
PRAME-214ENST00000543184 ANKARQ7Z5J8 1434 aa17.5■□□□□ 0.39
PRAME-214ENST00000543184 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
PRAME-214ENST00000543184 EDC4Q6P2E9 1401 aaKnown RBP17.49■□□□□ 0.39
PRAME-214ENST00000543184 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
PRAME-214ENST00000543184 LMBRD1Q9NUN5 540 aa17.49■□□□□ 0.39
PRAME-214ENST00000543184 CCDC173Q0VFZ6 552 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms