RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 CHD2O14647 1828 aaKnown RBP17.24■□□□□ 0.35
SLC3A2-220ENST00000542922 UPF2Q9HAU5 1272 aaKnown RBP17.23■□□□□ 0.35
SLC3A2-220ENST00000542922 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
SLC3A2-220ENST00000542922 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
SLC3A2-220ENST00000542922 HOXC9P31274 260 aa17.22■□□□□ 0.35
SLC3A2-220ENST00000542922 LTV1Q96GA3 475 aaPredicted RBP17.22■□□□□ 0.35
SLC3A2-220ENST00000542922 USP35Q9P2H5 1018 aa17.22■□□□□ 0.35
SLC3A2-220ENST00000542922 KIAA0232Q92628 1395 aa17.22■□□□□ 0.35
SLC3A2-220ENST00000542922 ABTB2Q8N961 1025 aa17.21■□□□□ 0.35
SLC3A2-220ENST00000542922 USP54Q70EL1 1684 aa17.21■□□□□ 0.34
SLC3A2-220ENST00000542922 C14orf37Q86TY3 774 aa17.21■□□□□ 0.34
SLC3A2-220ENST00000542922 MSH6P52701 1360 aa17.2■□□□□ 0.34
SLC3A2-220ENST00000542922 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 LTN1O94822 1766 aa17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 ZNF142P52746 1687 aaPredicted RBP17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 FRAT2O75474 233 aaPredicted RBP17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 G2E3Q7L622 706 aa17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
SLC3A2-220ENST00000542922 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 C22orf23Q9BZE7 217 aa17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 SETD1BQ9UPS6 1966 aaKnown RBP17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 BECN1Q14457 450 aa17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 CHMP4BQ9H444 224 aaKnown RBP17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
SLC3A2-220ENST00000542922 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
SLC3A2-220ENST00000542922 ANKLE2Q86XL3 938 aa17.17■□□□□ 0.34
SLC3A2-220ENST00000542922 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
SLC3A2-220ENST00000542922 MEIS3Q99687 375 aa17.16■□□□□ 0.34
SLC3A2-220ENST00000542922 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
SLC3A2-220ENST00000542922 F6X3S4 739 aa17.15■□□□□ 0.34
SLC3A2-220ENST00000542922 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
SLC3A2-220ENST00000542922 SPRYD3Q8NCJ5 442 aa17.14■□□□□ 0.33
SLC3A2-220ENST00000542922 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 ADAMTSL3P82987 1691 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 RTL1A6NKG5 1358 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 PTPRCP08575 1304 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 NFAT5O94916 1531 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
SLC3A2-220ENST00000542922 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 CEP85Q6P2H3 762 aa17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 C16orf71Q8IYS4 520 aaPredicted RBP17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 ADGRL3Q9HAR2 1447 aa17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 GNAT3A8MTJ3 354 aa17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 HAP1P54257 671 aaPredicted RBP17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
SLC3A2-220ENST00000542922 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
SLC3A2-220ENST00000542922 XPCQ01831 940 aaPredicted RBP17.11■□□□□ 0.33
SLC3A2-220ENST00000542922 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
SLC3A2-220ENST00000542922 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
SLC3A2-220ENST00000542922 GSPT1P15170 499 aaKnown RBP17.11■□□□□ 0.33
SLC3A2-220ENST00000542922 APBB1O00213 710 aa17.1■□□□□ 0.33
SLC3A2-220ENST00000542922 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
SLC3A2-220ENST00000542922 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
SLC3A2-220ENST00000542922 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
SLC3A2-220ENST00000542922 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
SLC3A2-220ENST00000542922 PSME1Q06323 249 aa17.08■□□□□ 0.33
SLC3A2-220ENST00000542922 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.33
SLC3A2-220ENST00000542922 NBPF4Q96M43 638 aa17.08■□□□□ 0.33
SLC3A2-220ENST00000542922 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
SLC3A2-220ENST00000542922 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
SLC3A2-220ENST00000542922 IP6K1Q92551 441 aa17.07■□□□□ 0.32
SLC3A2-220ENST00000542922 RBM25P49756 843 aaKnown RBP17.06■□□□□ 0.32
SLC3A2-220ENST00000542922 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
SLC3A2-220ENST00000542922 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
SLC3A2-220ENST00000542922 FLIIQ13045 1269 aa17.05■□□□□ 0.32
SLC3A2-220ENST00000542922 KIF2CQ99661 725 aa17.05■□□□□ 0.32
SLC3A2-220ENST00000542922 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
SLC3A2-220ENST00000542922 GSE1Q14687 1217 aa17.04■□□□□ 0.32
SLC3A2-220ENST00000542922 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
SLC3A2-220ENST00000542922 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
SLC3A2-220ENST00000542922 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
SLC3A2-220ENST00000542922 TTC22Q5TAA0 569 aa17.03■□□□□ 0.32
SLC3A2-220ENST00000542922 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
SLC3A2-220ENST00000542922 CCDC30Q5VVM6 783 aa17.02■□□□□ 0.32
SLC3A2-220ENST00000542922 CDC45O75419 566 aa17.02■□□□□ 0.31
SLC3A2-220ENST00000542922 MED1Q15648 1581 aaPredicted RBP17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 CD2BP2O95400 341 aaKnown RBP17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 CACNA1FO60840 1977 aa17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 KCNQ3O43525 872 aa17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 HSCBQ8IWL3 235 aa17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 PXDNQ92626 1479 aa17.01■□□□□ 0.31
SLC3A2-220ENST00000542922 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
SLC3A2-220ENST00000542922 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms