RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
TNC-212ENST00000542877 IQCEQ6IPM2 695 aa15.44■□□□□ 0.06
TNC-212ENST00000542877 KIAA0754O94854 1291 aa15.44■□□□□ 0.06
TNC-212ENST00000542877 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
TNC-212ENST00000542877 POLA1P09884 1462 aaPredicted RBP15.44■□□□□ 0.06
TNC-212ENST00000542877 SKIDA1Q1XH10 827 aa15.44■□□□□ 0.06
TNC-212ENST00000542877 FILIP1Q7Z7B0 1213 aa15.44■□□□□ 0.06
TNC-212ENST00000542877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.44■□□□□ 0.06
TNC-212ENST00000542877 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
TNC-212ENST00000542877 IL1RAPL2Q9NP60 686 aa15.43■□□□□ 0.06
TNC-212ENST00000542877 NSD3Q9BZ95 1437 aa15.43■□□□□ 0.06
TNC-212ENST00000542877 CCDC57Q2TAC2 916 aa15.43■□□□□ 0.06
TNC-212ENST00000542877 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
TNC-212ENST00000542877 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
TNC-212ENST00000542877 RARSP54136 660 aaKnown RBP15.42■□□□□ 0.06
TNC-212ENST00000542877 FAM177A1Q8N128 213 aaPredicted RBP15.42■□□□□ 0.06
TNC-212ENST00000542877 WASF1Q92558 559 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 CASTP20810 708 aaKnown RBP15.42■□□□□ 0.06
TNC-212ENST00000542877 CABP4P57796 275 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 NAIPQ13075 1403 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 FAM177BA6PVY3 158 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 SPG7Q9UQ90 795 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 PLEKHH1Q9ULM0 1364 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 RAB11FIP3O75154 756 aa15.42■□□□□ 0.06
TNC-212ENST00000542877 MX1P20591 662 aa15.41■□□□□ 0.06
TNC-212ENST00000542877 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
TNC-212ENST00000542877 CEP126Q9P2H0 1117 aa15.41■□□□□ 0.06
TNC-212ENST00000542877 CCDC183Q5T5S1 534 aa15.41■□□□□ 0.06
TNC-212ENST00000542877 NUP133Q8WUM0 1156 aa15.41■□□□□ 0.06
TNC-212ENST00000542877 UBXN4Q92575 508 aa15.41■□□□□ 0.06
TNC-212ENST00000542877 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
TNC-212ENST00000542877 FKBP4Q02790 459 aaKnown RBP eCLIP15.4■□□□□ 0.06
TNC-212ENST00000542877 SOGA3Q5TF21 947 aa15.4■□□□□ 0.06
TNC-212ENST00000542877 SCAND2PQ9GZW5 306 aaPredicted RBP15.4■□□□□ 0.06
TNC-212ENST00000542877 TANGO6Q9C0B7 1094 aa15.4■□□□□ 0.06
TNC-212ENST00000542877 GOLGA6L7A0A1B0GV03 622 aa15.39■□□□□ 0.05
TNC-212ENST00000542877 SH2B1Q9NRF2 756 aaPredicted RBP15.39■□□□□ 0.05
TNC-212ENST00000542877 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
TNC-212ENST00000542877 EXOC6BQ9Y2D4 811 aa15.39■□□□□ 0.05
TNC-212ENST00000542877 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
TNC-212ENST00000542877 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
TNC-212ENST00000542877 MYL6BP14649 208 aa15.39■□□□□ 0.05
TNC-212ENST00000542877 UBAC1Q9BSL1 405 aa15.39■□□□□ 0.05
TNC-212ENST00000542877 SSH1Q8WYL5 1049 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 NUTM1Q86Y26 1132 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 CEP131Q9UPN4 1083 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 RRS1Q15050 365 aaKnown RBP15.38■□□□□ 0.05
TNC-212ENST00000542877 IMMTQ16891 758 aaKnown RBP15.38■□□□□ 0.05
TNC-212ENST00000542877 ARHGAP29Q52LW3 1261 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 MPHOSPH8Q99549 860 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 GBP3Q9H0R5 595 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 SFPQP23246 707 aaKnown RBP eCLIP15.38■□□□□ 0.05
TNC-212ENST00000542877 PTPN14Q15678 1187 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 CFAP100Q494V2 611 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 BMP2KQ9NSY1 1161 aaPredicted RBP15.38■□□□□ 0.05
TNC-212ENST00000542877 ANO10Q9NW15 660 aa15.38■□□□□ 0.05
TNC-212ENST00000542877 LRPPRCP42704 1394 aaKnown RBP15.37■□□□□ 0.05
TNC-212ENST00000542877 USP8P40818 1118 aa15.37■□□□□ 0.05
TNC-212ENST00000542877 TAF3Q5VWG9 929 aa15.37■□□□□ 0.05
TNC-212ENST00000542877 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
TNC-212ENST00000542877 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
TNC-212ENST00000542877 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
TNC-212ENST00000542877 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
TNC-212ENST00000542877 TMCO3Q6UWJ1 677 aa15.37■□□□□ 0.05
TNC-212ENST00000542877 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 TDO2P48775 406 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 ZRSR2Q15696 482 aaKnown RBP15.36■□□□□ 0.05
TNC-212ENST00000542877 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
TNC-212ENST00000542877 NEFHP12036 1026 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 CAMK4Q16566 473 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
TNC-212ENST00000542877 PDCL3Q9H2J4 239 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
TNC-212ENST00000542877 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
TNC-212ENST00000542877 CCDC148Q8NFR7 591 aa15.35■□□□□ 0.05
TNC-212ENST00000542877 TNPO1Q92973 898 aaKnown RBP15.35■□□□□ 0.05
TNC-212ENST00000542877 ZHX3Q9H4I2 956 aa15.35■□□□□ 0.05
TNC-212ENST00000542877 CCDC141Q6ZP82 1450 aa15.35■□□□□ 0.05
TNC-212ENST00000542877 PRPF40BQ6NWY9 871 aaKnown RBP15.35■□□□□ 0.05
TNC-212ENST00000542877 FERMT3Q86UX7 667 aa15.35■□□□□ 0.05
TNC-212ENST00000542877 KIF18AQ8NI77 898 aa15.35■□□□□ 0.05
TNC-212ENST00000542877 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
TNC-212ENST00000542877 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
TNC-212ENST00000542877 EIF5P55010 431 aaKnown RBP15.34■□□□□ 0.05
TNC-212ENST00000542877 ANKRD18AQ8IVF6 992 aa15.34■□□□□ 0.05
TNC-212ENST00000542877 CTAGE5O15320 804 aa15.34■□□□□ 0.05
TNC-212ENST00000542877 KIAA1328Q86T90 577 aa15.34■□□□□ 0.05
TNC-212ENST00000542877 LRRFIP2Q9Y608 721 aaKnown RBP15.34■□□□□ 0.05
TNC-212ENST00000542877 SSFA2P28290 1259 aa15.34■□□□□ 0.05
TNC-212ENST00000542877 SEPT7Q16181 437 aaKnown RBP15.34■□□□□ 0.05
TNC-212ENST00000542877 TMEM132AQ24JP5 1023 aa15.33■□□□□ 0.05
TNC-212ENST00000542877 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.04
TNC-212ENST00000542877 MCM5P33992 734 aa15.33■□□□□ 0.04
TNC-212ENST00000542877 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
TNC-212ENST00000542877 HMGB1P09429 215 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms