RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 LMBRD1Q9NUN5 540 aa15.91■□□□□ 0.14
DDX11-223ENST00000542838 ST18O60284 1047 aa15.91■□□□□ 0.14
DDX11-223ENST00000542838 ZNF445P59923 1031 aa15.91■□□□□ 0.14
DDX11-223ENST00000542838 KRT24Q2M2I5 525 aa15.91■□□□□ 0.14
DDX11-223ENST00000542838 GLIPR1L2Q4G1C9 344 aa15.91■□□□□ 0.14
DDX11-223ENST00000542838 CWC22Q9HCG8 908 aaKnown RBP15.91■□□□□ 0.14
DDX11-223ENST00000542838 WASLO00401 505 aaPredicted RBP15.9■□□□□ 0.14
DDX11-223ENST00000542838 ZSCAN30Q86W11 494 aa15.9■□□□□ 0.14
DDX11-223ENST00000542838 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
DDX11-223ENST00000542838 ZSCAN23Q3MJ62 389 aa15.89■□□□□ 0.13
DDX11-223ENST00000542838 MSH6P52701 1360 aa15.89■□□□□ 0.13
DDX11-223ENST00000542838 ZGPATQ8N5A5 531 aaKnown RBP15.88■□□□□ 0.13
DDX11-223ENST00000542838 RGS12O14924 1447 aa15.88■□□□□ 0.13
DDX11-223ENST00000542838 MSNP26038 577 aaKnown RBP15.88■□□□□ 0.13
DDX11-223ENST00000542838 RTL1A6NKG5 1358 aa15.88■□□□□ 0.13
DDX11-223ENST00000542838 CPS1P31327 1500 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 REC8O95072 547 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 NUDT16Q96DE0 195 aaKnown RBP15.87■□□□□ 0.13
DDX11-223ENST00000542838 MEIS3Q99687 375 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 NCKAP5LQ9HCH0 1330 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 PRPF40AO75400 957 aaKnown RBP15.87■□□□□ 0.13
DDX11-223ENST00000542838 TPM2P07951 284 aa15.87■□□□□ 0.13
DDX11-223ENST00000542838 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
DDX11-223ENST00000542838 SULT6B1Q6IMI4 303 aa15.86■□□□□ 0.13
DDX11-223ENST00000542838 MCM10Q7L590 875 aa15.86■□□□□ 0.13
DDX11-223ENST00000542838 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
DDX11-223ENST00000542838 PTPRCP08575 1304 aa15.85■□□□□ 0.13
DDX11-223ENST00000542838 CHL1O00533 1208 aa15.85■□□□□ 0.13
DDX11-223ENST00000542838 KIAA1211Q6ZU35 1233 aa15.85■□□□□ 0.13
DDX11-223ENST00000542838 RBSNQ9H1K0 784 aa15.85■□□□□ 0.13
DDX11-223ENST00000542838 ERC2O15083 957 aa15.85■□□□□ 0.13
DDX11-223ENST00000542838 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
DDX11-223ENST00000542838 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
DDX11-223ENST00000542838 ZDHHC9Q9Y397 364 aa15.84■□□□□ 0.13
DDX11-223ENST00000542838 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
DDX11-223ENST00000542838 EIF4A2Q14240 407 aaKnown RBP15.84■□□□□ 0.13
DDX11-223ENST00000542838 TXNDC2Q86VQ3 553 aa15.84■□□□□ 0.13
DDX11-223ENST00000542838 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
DDX11-223ENST00000542838 MON2Q7Z3U7 1717 aa15.84■□□□□ 0.13
DDX11-223ENST00000542838 PRIM1P49642 420 aaKnown RBP15.83■□□□□ 0.13
DDX11-223ENST00000542838 GPT2Q8TD30 523 aa15.83■□□□□ 0.13
DDX11-223ENST00000542838 HMMRO75330 724 aa15.83■□□□□ 0.12
DDX11-223ENST00000542838 KIAA0232Q92628 1395 aa15.83■□□□□ 0.12
DDX11-223ENST00000542838 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
DDX11-223ENST00000542838 OFD1O75665 1012 aa15.82■□□□□ 0.12
DDX11-223ENST00000542838 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
DDX11-223ENST00000542838 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
DDX11-223ENST00000542838 PDE1AP54750 535 aa15.81■□□□□ 0.12
DDX11-223ENST00000542838 HS1BP3Q53T59 392 aa15.81■□□□□ 0.12
DDX11-223ENST00000542838 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
DDX11-223ENST00000542838 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.81■□□□□ 0.12
DDX11-223ENST00000542838 CHAMP1Q96JM3 812 aa15.81■□□□□ 0.12
DDX11-223ENST00000542838 C3P01024 1663 aa15.81■□□□□ 0.12
DDX11-223ENST00000542838 NEK4P51957 841 aa15.8■□□□□ 0.12
DDX11-223ENST00000542838 ITSN1Q15811 1721 aa15.8■□□□□ 0.12
DDX11-223ENST00000542838 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
DDX11-223ENST00000542838 NRKQ7Z2Y5 1582 aa15.8■□□□□ 0.12
DDX11-223ENST00000542838 METP08581 1390 aa15.8■□□□□ 0.12
DDX11-223ENST00000542838 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDX11-223ENST00000542838 OSBPL3Q9H4L5 887 aa15.8■□□□□ 0.12
DDX11-223ENST00000542838 PDLIM2Q96JY6 352 aa15.79■□□□□ 0.12
DDX11-223ENST00000542838 TMEM63CQ9P1W3 806 aa15.79■□□□□ 0.12
DDX11-223ENST00000542838 LRSAM1Q6UWE0 723 aa15.79■□□□□ 0.12
DDX11-223ENST00000542838 TMX3Q96JJ7 454 aa15.79■□□□□ 0.12
DDX11-223ENST00000542838 F6X3S4 739 aa15.79■□□□□ 0.12
DDX11-223ENST00000542838 MIS18AQ9NYP9 233 aa15.79■□□□□ 0.12
DDX11-223ENST00000542838 NOL7Q9UMY1 257 aaKnown RBP15.79■□□□□ 0.12
DDX11-223ENST00000542838 SYCE3A1L190 88 aa15.78■□□□□ 0.12
DDX11-223ENST00000542838 G2E3Q7L622 706 aa15.78■□□□□ 0.12
DDX11-223ENST00000542838 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
DDX11-223ENST00000542838 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
DDX11-223ENST00000542838 TSHZ3Q63HK5 1081 aa15.77■□□□□ 0.12
DDX11-223ENST00000542838 EXOC6BQ9Y2D4 811 aa15.77■□□□□ 0.12
DDX11-223ENST00000542838 NRXN3Q9Y4C0 1643 aa15.77■□□□□ 0.11
DDX11-223ENST00000542838 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.11
DDX11-223ENST00000542838 MCM2P49736 904 aa15.76■□□□□ 0.11
DDX11-223ENST00000542838 PRR36Q9H6K5 1346 aa15.76■□□□□ 0.11
DDX11-223ENST00000542838 CRB1P82279 1406 aa15.76■□□□□ 0.11
DDX11-223ENST00000542838 MCCP23508 829 aa15.76■□□□□ 0.11
DDX11-223ENST00000542838 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
DDX11-223ENST00000542838 ESYT1Q9BSJ8 1104 aa15.76■□□□□ 0.11
DDX11-223ENST00000542838 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
DDX11-223ENST00000542838 TTC21BQ7Z4L5 1316 aa15.75■□□□□ 0.11
DDX11-223ENST00000542838 ZNF500O60304 480 aaPredicted RBP15.75■□□□□ 0.11
DDX11-223ENST00000542838 MBD3O95983 291 aa15.75■□□□□ 0.11
DDX11-223ENST00000542838 GNAI2P04899 355 aa15.75■□□□□ 0.11
DDX11-223ENST00000542838 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.75■□□□□ 0.11
DDX11-223ENST00000542838 R3HCC1Q9Y3T6 440 aaKnown RBP15.75■□□□□ 0.11
DDX11-223ENST00000542838 SPATA31D1Q6ZQQ2 1576 aa15.75■□□□□ 0.11
DDX11-223ENST00000542838 NOL8Q76FK4 1167 aaKnown RBP15.75■□□□□ 0.11
DDX11-223ENST00000542838 BRD1O95696 1058 aa15.74■□□□□ 0.11
DDX11-223ENST00000542838 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
DDX11-223ENST00000542838 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
DDX11-223ENST00000542838 RILPL2Q969X0 211 aa15.74■□□□□ 0.11
DDX11-223ENST00000542838 TERF1P54274 439 aa15.74■□□□□ 0.11
DDX11-223ENST00000542838 MLECQ14165 292 aa15.74■□□□□ 0.11
DDX11-223ENST00000542838 LRRCC1Q9C099 1032 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms