RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MARF1Q9Y4F3 1742 aaKnown RBP8.24□□□□□ -1.09
PTPRO-208ENST00000542557 RGPD8O14715 1765 aaPredicted RBP8.23□□□□□ -1.09
PTPRO-208ENST00000542557 FAM83GA6ND36 823 aa8.23□□□□□ -1.09
PTPRO-208ENST00000542557 CHL1O00533 1208 aa8.23□□□□□ -1.09
PTPRO-208ENST00000542557 CRB1P82279 1406 aa8.23□□□□□ -1.09
PTPRO-208ENST00000542557 CEBPAP49715 358 aaPredicted RBP8.23□□□□□ -1.09
PTPRO-208ENST00000542557 RGS12O14924 1447 aa8.23□□□□□ -1.09
PTPRO-208ENST00000542557 CEP170BQ9Y4F5 1589 aaPredicted RBP8.23□□□□□ -1.09
PTPRO-208ENST00000542557 MAP3K19Q56UN5 1328 aa8.23□□□□□ -1.09
PTPRO-208ENST00000542557 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
PTPRO-208ENST00000542557 BMP2KLQ5H9B9 411 aa8.23□□□□□ -1.09
PTPRO-208ENST00000542557 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
PTPRO-208ENST00000542557 C22orf23Q9BZE7 217 aa8.22□□□□□ -1.09
PTPRO-208ENST00000542557 PTPRCP08575 1304 aa8.22□□□□□ -1.09
PTPRO-208ENST00000542557 IGSF1Q8N6C5 1336 aa8.22□□□□□ -1.09
PTPRO-208ENST00000542557 DCTN1Q14203 1278 aa8.22□□□□□ -1.09
PTPRO-208ENST00000542557 ELL2O00472 640 aaPredicted RBP8.21□□□□□ -1.09
PTPRO-208ENST00000542557 PLEKHG5O94827 1062 aa8.21□□□□□ -1.09
PTPRO-208ENST00000542557 TBC1D2Q9BYX2 928 aa8.21□□□□□ -1.09
PTPRO-208ENST00000542557 LNPKQ9C0E8 428 aa8.21□□□□□ -1.09
PTPRO-208ENST00000542557 ANTXR1Q9H6X2 564 aa8.21□□□□□ -1.09
PTPRO-208ENST00000542557 ZNF142P52746 1687 aaPredicted RBP8.21□□□□□ -1.09
PTPRO-208ENST00000542557 SIRT2Q8IXJ6 389 aa8.21□□□□□ -1.1
PTPRO-208ENST00000542557 ATP10DQ9P241 1426 aa8.21□□□□□ -1.1
PTPRO-208ENST00000542557 NUTM2FA1L443 756 aa8.2□□□□□ -1.1
PTPRO-208ENST00000542557 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
PTPRO-208ENST00000542557 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
PTPRO-208ENST00000542557 GSE1Q14687 1217 aa8.2□□□□□ -1.1
PTPRO-208ENST00000542557 NGDNQ8NEJ9 315 aaKnown RBP8.2□□□□□ -1.1
PTPRO-208ENST00000542557 NWD1Q149M9 1564 aa8.2□□□□□ -1.1
PTPRO-208ENST00000542557 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
PTPRO-208ENST00000542557 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
PTPRO-208ENST00000542557 GAS2L2Q8NHY3 880 aa8.19□□□□□ -1.1
PTPRO-208ENST00000542557 C1orf115Q9H7X2 142 aa8.19□□□□□ -1.1
PTPRO-208ENST00000542557 RTL1A6NKG5 1358 aa8.19□□□□□ -1.1
PTPRO-208ENST00000542557 CHD2O14647 1828 aaKnown RBP8.19□□□□□ -1.1
PTPRO-208ENST00000542557 ANKRD45Q5TZF3 282 aa8.19□□□□□ -1.1
PTPRO-208ENST00000542557 MCM10Q7L590 875 aa8.19□□□□□ -1.1
PTPRO-208ENST00000542557 FAM208AQ9UK61 1670 aaKnown RBP8.19□□□□□ -1.1
PTPRO-208ENST00000542557 N4BP2Q86UW6 1770 aaPredicted RBP8.19□□□□□ -1.1
PTPRO-208ENST00000542557 NCOA3Q9Y6Q9 1424 aa8.18□□□□□ -1.1
PTPRO-208ENST00000542557 MTHFSDQ2M296 383 aaKnown RBP8.18□□□□□ -1.1
PTPRO-208ENST00000542557 RPAP2Q8IXW5 612 aaPredicted RBP8.18□□□□□ -1.1
PTPRO-208ENST00000542557 ANKRD44Q8N8A2 993 aa8.18□□□□□ -1.1
PTPRO-208ENST00000542557 DCTPP1Q9H773 170 aa8.18□□□□□ -1.1
PTPRO-208ENST00000542557 SOS1Q07889 1333 aaPredicted RBP8.18□□□□□ -1.1
PTPRO-208ENST00000542557 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
PTPRO-208ENST00000542557 AMPHP49418 695 aa8.18□□□□□ -1.1
PTPRO-208ENST00000542557 RTF1Q92541 710 aaKnown RBP8.18□□□□□ -1.1
PTPRO-208ENST00000542557 EYA1Q99502 592 aa8.18□□□□□ -1.1
PTPRO-208ENST00000542557 MSH6P52701 1360 aa8.18□□□□□ -1.1
PTPRO-208ENST00000542557 KCNA6P17658 529 aa8.17□□□□□ -1.1
PTPRO-208ENST00000542557 SNX21Q969T3 373 aa8.17□□□□□ -1.1
PTPRO-208ENST00000542557 KRT24Q2M2I5 525 aa8.17□□□□□ -1.1
PTPRO-208ENST00000542557 SLKQ9H2G2 1235 aaPredicted RBP8.17□□□□□ -1.1
PTPRO-208ENST00000542557 HOXC9P31274 260 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 BABAM1Q9NWV8 329 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 TSPYL4Q9UJ04 414 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 CACNA1FO60840 1977 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 SOX12O15370 315 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 NLRP6P59044 892 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 CEP85Q6P2H3 762 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 HSCBQ8IWL3 235 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 NFAT5O94916 1531 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 LTN1O94822 1766 aa8.16□□□□□ -1.1
PTPRO-208ENST00000542557 PXDNLA1KZ92 1463 aa8.15□□□□□ -1.1
PTPRO-208ENST00000542557 MAP3K5Q99683 1374 aa8.15□□□□□ -1.1
PTPRO-208ENST00000542557 FOXO3O43524 673 aa8.15□□□□□ -1.1
PTPRO-208ENST00000542557 CDC45O75419 566 aa8.15□□□□□ -1.1
PTPRO-208ENST00000542557 MED1Q15648 1581 aaPredicted RBP8.15□□□□□ -1.1
PTPRO-208ENST00000542557 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.1
PTPRO-208ENST00000542557 FOXD4L1Q9NU39 408 aa8.15□□□□□ -1.1
PTPRO-208ENST00000542557 CHMP5Q9NZZ3 219 aa8.15□□□□□ -1.1
PTPRO-208ENST00000542557 ADGRL3Q9HAR2 1447 aa8.15□□□□□ -1.11
PTPRO-208ENST00000542557 CCT4P50991 539 aaKnown RBP8.15□□□□□ -1.11
PTPRO-208ENST00000542557 GNAT3A8MTJ3 354 aa8.14□□□□□ -1.11
PTPRO-208ENST00000542557 SLC4A2P04920 1241 aa8.14□□□□□ -1.11
PTPRO-208ENST00000542557 PLEKHM2Q8IWE5 1019 aa8.14□□□□□ -1.11
PTPRO-208ENST00000542557 GSPT1P15170 499 aaKnown RBP8.14□□□□□ -1.11
PTPRO-208ENST00000542557 TTC22Q5TAA0 569 aa8.14□□□□□ -1.11
PTPRO-208ENST00000542557 HMMRO75330 724 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 DDIT3P35638 169 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 MEIS3Q99687 375 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 PHF8Q9UPP1 1060 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 ADAMTSL3P82987 1691 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 ANKLE2Q86XL3 938 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 ABTB2Q8N961 1025 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 KIF2CQ99661 725 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 STK31Q9BXU1 1019 aa8.13□□□□□ -1.11
PTPRO-208ENST00000542557 CIZ1Q9ULV3 898 aaPredicted RBP8.13□□□□□ -1.11
PTPRO-208ENST00000542557 KDM3BQ7LBC6 1761 aa8.12□□□□□ -1.11
PTPRO-208ENST00000542557 CCDC30Q5VVM6 783 aa8.12□□□□□ -1.11
PTPRO-208ENST00000542557 MIS18AQ9NYP9 233 aa8.12□□□□□ -1.11
PTPRO-208ENST00000542557 CEMIPQ8WUJ3 1361 aa8.12□□□□□ -1.11
PTPRO-208ENST00000542557 LMO7Q8WWI1 1683 aa8.12□□□□□ -1.11
PTPRO-208ENST00000542557 G2E3Q7L622 706 aa8.12□□□□□ -1.11
PTPRO-208ENST00000542557 NCAPD2Q15021 1401 aa8.12□□□□□ -1.11
PTPRO-208ENST00000542557 SLIT3O75094 1523 aa8.11□□□□□ -1.11
PTPRO-208ENST00000542557 IP6K1Q92551 441 aa8.11□□□□□ -1.11
PTPRO-208ENST00000542557 TUBGCP6Q96RT7 1819 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms