RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 SMARCE1Q969G3 411 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 ZNHIT6Q9NWK9 470 aaKnown RBP7.44□□□□□ -1.22
DMD-228ENST00000541735 TRMT112Q9UI30 125 aaKnown RBP7.44□□□□□ -1.22
DMD-228ENST00000541735 NBPF8Q3BBV2 869 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 HSP90B2PQ58FF3 399 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 NBPF14Q5TI25 921 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 AFAP1Q8N556 730 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 SIRT1Q96EB6 747 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 CDK19Q9BWU1 502 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 LRRFIP2Q9Y608 721 aaKnown RBP7.44□□□□□ -1.22
DMD-228ENST00000541735 EXOC5O00471 708 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 ERLIN2O94905 339 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 BBXQ8WY36 941 aaPredicted RBP7.44□□□□□ -1.22
DMD-228ENST00000541735 FIBPO43427 364 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 EZRP15311 586 aaKnown RBP7.44□□□□□ -1.22
DMD-228ENST00000541735 CHRNA2Q15822 529 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 DNAI2Q9GZS0 605 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 DDX11L8A8MPP1 907 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 KINO60870 393 aaKnown RBP7.44□□□□□ -1.22
DMD-228ENST00000541735 STIM1Q13586 685 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 CCDC150Q8NCX0 1101 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 SSX2IPQ9Y2D8 614 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 POTEJP0CG39 1038 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 NF2P35240 595 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 HSP90AB3PQ58FF7 597 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 CEP126Q9P2H0 1117 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 NOD1Q9Y239 953 aa7.44□□□□□ -1.22
DMD-228ENST00000541735 ME1P48163 572 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 CCDC144CPQ8IYA2 1237 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 RBM19Q9Y4C8 960 aaKnown RBP7.43□□□□□ -1.22
DMD-228ENST00000541735 DCTN1Q14203 1278 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 TRIM5Q9C035 493 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 CABP1Q9NZU7 370 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 ROCK1Q13464 1354 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 NLRP5P59047 1200 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 NAT10Q9H0A0 1025 aaKnown RBP7.43□□□□□ -1.22
DMD-228ENST00000541735 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
DMD-228ENST00000541735 JAG2Q9Y219 1238 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 BCAR3O75815 825 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 CTNNA2P26232 953 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 ST5P78524 1137 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 MYD88Q99836 296 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 PPFIA3O75145 1194 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 DDX11Q96FC9 970 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 IL1RAPL2Q9NP60 686 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
DMD-228ENST00000541735 TEX35Q5T0J7 233 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 STK25O00506 426 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 CT47B1P0C2W7 299 aaPredicted RBP7.42□□□□□ -1.22
DMD-228ENST00000541735 UBE4AQ14139 1066 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 GOPCQ9HD26 462 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 ZBTB21Q9ULJ3 1066 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 LMAN1P49257 510 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 TSR2Q969E8 191 aaKnown RBP7.42□□□□□ -1.22
DMD-228ENST00000541735 ZBTB3Q9H5J0 574 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 NOL7Q9UMY1 257 aaKnown RBP7.42□□□□□ -1.22
DMD-228ENST00000541735 SMC1AQ14683 1233 aaKnown RBP7.42□□□□□ -1.22
DMD-228ENST00000541735 CWC27Q6UX04 472 aaKnown RBP7.42□□□□□ -1.22
DMD-228ENST00000541735 RUNDC1Q96C34 613 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 EPB41L2O43491 1005 aaKnown RBP7.42□□□□□ -1.22
DMD-228ENST00000541735 CABP5Q9NP86 173 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 GINS2Q9Y248 185 aa7.42□□□□□ -1.22
DMD-228ENST00000541735 SH3BP5O60239 455 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 TMX1Q9H3N1 280 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 KLHL10Q6JEL2 608 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 ZNF710Q8N1W2 664 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 RAB3GAP2Q9H2M9 1393 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 DDX46Q7L014 1031 aaKnown RBP7.41□□□□□ -1.22
DMD-228ENST00000541735 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 GOLGA6L10A0A0M3HER8 536 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 GOLGA6L10A6NI86 522 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 NEK4P51957 841 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 EIF5P55010 431 aaKnown RBP7.41□□□□□ -1.22
DMD-228ENST00000541735 GUCY1B3Q02153 619 aa7.41□□□□□ -1.22
DMD-228ENST00000541735 SYCP3Q8IZU3 236 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 MYBBP1AQ9BQG0 1328 aaKnown RBP7.4□□□□□ -1.22
DMD-228ENST00000541735 CFAP70Q5T0N1 1121 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 NOP9Q86U38 636 aaKnown RBP7.4□□□□□ -1.22
DMD-228ENST00000541735 NBPF5PQ86XG9 351 aaPredicted RBP7.4□□□□□ -1.22
DMD-228ENST00000541735 OGFOD1Q8N543 542 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.4□□□□□ -1.22
DMD-228ENST00000541735 KIF15Q9NS87 1388 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 MIA2Q96PC5 1412 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 ZSCAN25Q6NSZ9 544 aa7.4□□□□□ -1.22
DMD-228ENST00000541735 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.4□□□□□ -1.22
DMD-228ENST00000541735 TWISTNBQ3B726 338 aaPredicted RBP7.4□□□□□ -1.22
DMD-228ENST00000541735 GSTTP1A0A1W2PQM5 241 aa7.4□□□□□ -1.23
DMD-228ENST00000541735 GNAI2P04899 355 aa7.4□□□□□ -1.23
DMD-228ENST00000541735 JDP2Q8WYK2 163 aa7.4□□□□□ -1.23
DMD-228ENST00000541735 SYNCQ9H7C4 482 aa7.4□□□□□ -1.23
DMD-228ENST00000541735 CCDC18Q5T9S5 1454 aa7.4□□□□□ -1.23
DMD-228ENST00000541735 CEP57L1Q8IYX8 460 aa7.4□□□□□ -1.23
DMD-228ENST00000541735 SRGAP3O43295 1099 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 TOM1O60784 492 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 TCERG1LQ5VWI1 586 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 IPO9Q96P70 1041 aaKnown RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 IFIT1P09914 478 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms