RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
VARS2-211ENST00000541562 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
VARS2-211ENST00000541562 MAP2P11137 1827 aaKnown RBP18.57■□□□□ 0.56
VARS2-211ENST00000541562 ANO2Q9NQ90 1003 aa18.57■□□□□ 0.56
VARS2-211ENST00000541562 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
VARS2-211ENST00000541562 AK9Q5TCS8 1911 aa18.56■□□□□ 0.56
VARS2-211ENST00000541562 KCNQ3O43525 872 aa18.56■□□□□ 0.56
VARS2-211ENST00000541562 TAOK2Q9UL54 1235 aa18.56■□□□□ 0.56
VARS2-211ENST00000541562 ZNF853P0CG23 659 aa18.56■□□□□ 0.56
VARS2-211ENST00000541562 EID1Q9Y6B2 187 aa18.56■□□□□ 0.56
VARS2-211ENST00000541562 A2ML1A8K2U0 1454 aa18.56■□□□□ 0.56
VARS2-211ENST00000541562 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
VARS2-211ENST00000541562 RBM27Q9P2N5 1060 aaKnown RBP18.56■□□□□ 0.56
VARS2-211ENST00000541562 AIMP1Q12904 312 aaKnown RBP18.55■□□□□ 0.56
VARS2-211ENST00000541562 GDPD2Q9HCC8 539 aa18.55■□□□□ 0.56
VARS2-211ENST00000541562 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
VARS2-211ENST00000541562 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
VARS2-211ENST00000541562 LRRFIP2Q9Y608 721 aaKnown RBP18.55■□□□□ 0.56
VARS2-211ENST00000541562 K7ELQ4 463 aaPredicted RBP18.55■□□□□ 0.56
VARS2-211ENST00000541562 KCNA6P17658 529 aa18.54■□□□□ 0.56
VARS2-211ENST00000541562 NEK4P51957 841 aa18.54■□□□□ 0.56
VARS2-211ENST00000541562 NEO1Q92859 1461 aa18.54■□□□□ 0.56
VARS2-211ENST00000541562 MPRIPQ6WCQ1 1025 aa18.53■□□□□ 0.56
VARS2-211ENST00000541562 ARID3AQ99856 593 aa18.53■□□□□ 0.56
VARS2-211ENST00000541562 AAMPQ13685 434 aa18.53■□□□□ 0.56
VARS2-211ENST00000541562 CAVIN1Q6NZI2 390 aaKnown RBP18.53■□□□□ 0.56
VARS2-211ENST00000541562 TTC22Q5TAA0 569 aa18.53■□□□□ 0.56
VARS2-211ENST00000541562 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
VARS2-211ENST00000541562 ABCC4O15439 1325 aa18.53■□□□□ 0.56
VARS2-211ENST00000541562 HDGFP51858 240 aaKnown RBP18.52■□□□□ 0.56
VARS2-211ENST00000541562 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
VARS2-211ENST00000541562 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.55
VARS2-211ENST00000541562 OS9Q13438 667 aaPredicted RBP18.52■□□□□ 0.55
VARS2-211ENST00000541562 ESCO1Q5FWF5 840 aa18.52■□□□□ 0.55
VARS2-211ENST00000541562 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.55
VARS2-211ENST00000541562 CHL1O00533 1208 aa18.51■□□□□ 0.55
VARS2-211ENST00000541562 RNF214Q8ND24 703 aa18.51■□□□□ 0.55
VARS2-211ENST00000541562 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
VARS2-211ENST00000541562 DCTPP1Q9H773 170 aa18.51■□□□□ 0.55
VARS2-211ENST00000541562 CPA1P15085 419 aa18.51■□□□□ 0.55
VARS2-211ENST00000541562 PRAMEF22A3QJZ6 481 aa18.5■□□□□ 0.55
VARS2-211ENST00000541562 FLIIQ13045 1269 aa18.5■□□□□ 0.55
VARS2-211ENST00000541562 ANKRD44Q8N8A2 993 aa18.5■□□□□ 0.55
VARS2-211ENST00000541562 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
VARS2-211ENST00000541562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.49■□□□□ 0.55
VARS2-211ENST00000541562 SURF6O75683 361 aaKnown RBP18.49■□□□□ 0.55
VARS2-211ENST00000541562 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
VARS2-211ENST00000541562 TNRQ92752 1358 aa18.49■□□□□ 0.55
VARS2-211ENST00000541562 PALD1Q9ULE6 856 aa18.49■□□□□ 0.55
VARS2-211ENST00000541562 RBM25P49756 843 aaKnown RBP18.48■□□□□ 0.55
VARS2-211ENST00000541562 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
VARS2-211ENST00000541562 GRPEL1Q9HAV7 217 aa18.48■□□□□ 0.55
VARS2-211ENST00000541562 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
VARS2-211ENST00000541562 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
VARS2-211ENST00000541562 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
VARS2-211ENST00000541562 L1TD1Q5T7N2 865 aaKnown RBP18.47■□□□□ 0.55
VARS2-211ENST00000541562 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
VARS2-211ENST00000541562 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
VARS2-211ENST00000541562 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
VARS2-211ENST00000541562 ZC3H6P61129 1189 aaKnown RBP18.46■□□□□ 0.55
VARS2-211ENST00000541562 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
VARS2-211ENST00000541562 USP26Q9BXU7 913 aa18.46■□□□□ 0.55
VARS2-211ENST00000541562 SIL1Q9H173 461 aa18.46■□□□□ 0.55
VARS2-211ENST00000541562 IL25Q9H293 177 aa18.46■□□□□ 0.55
VARS2-211ENST00000541562 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
VARS2-211ENST00000541562 PSME1Q06323 249 aa18.45■□□□□ 0.54
VARS2-211ENST00000541562 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
VARS2-211ENST00000541562 ARHGAP45Q92619 1136 aa18.45■□□□□ 0.54
VARS2-211ENST00000541562 CHMP3Q9Y3E7 222 aa18.45■□□□□ 0.54
VARS2-211ENST00000541562 GNAI2P04899 355 aa18.45■□□□□ 0.54
VARS2-211ENST00000541562 PDE1AP54750 535 aa18.45■□□□□ 0.54
VARS2-211ENST00000541562 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
VARS2-211ENST00000541562 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
VARS2-211ENST00000541562 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
VARS2-211ENST00000541562 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
VARS2-211ENST00000541562 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
VARS2-211ENST00000541562 PPFIA3O75145 1194 aa18.44■□□□□ 0.54
VARS2-211ENST00000541562 NBPF7P0C2Y1 421 aaPredicted RBP18.44■□□□□ 0.54
VARS2-211ENST00000541562 ADGRB2O60241 1585 aa18.43■□□□□ 0.54
VARS2-211ENST00000541562 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
VARS2-211ENST00000541562 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
VARS2-211ENST00000541562 CHPF2Q9P2E5 772 aa18.43■□□□□ 0.54
VARS2-211ENST00000541562 DDX11L8A8MPP1 907 aa18.43■□□□□ 0.54
VARS2-211ENST00000541562 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
VARS2-211ENST00000541562 NSFL1CQ9UNZ2 370 aaKnown RBP18.43■□□□□ 0.54
VARS2-211ENST00000541562 SRGAP3O43295 1099 aa18.42■□□□□ 0.54
VARS2-211ENST00000541562 UBTFL1P0CB47 393 aaPredicted RBP18.42■□□□□ 0.54
VARS2-211ENST00000541562 CPSF1Q10570 1443 aaKnown RBP18.42■□□□□ 0.54
VARS2-211ENST00000541562 PI4KAP2A4QPH2 592 aa18.42■□□□□ 0.54
VARS2-211ENST00000541562 HMMRO75330 724 aa18.42■□□□□ 0.54
VARS2-211ENST00000541562 SLC39A6Q13433 755 aa18.42■□□□□ 0.54
VARS2-211ENST00000541562 PI4KAP1Q8N8J0 262 aa18.42■□□□□ 0.54
VARS2-211ENST00000541562 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
VARS2-211ENST00000541562 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
VARS2-211ENST00000541562 CWC27Q6UX04 472 aaKnown RBP18.41■□□□□ 0.54
VARS2-211ENST00000541562 NDUFB9Q9Y6M9 179 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 TMEM2Q9UHN6 1383 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 MYL6BP14649 208 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 NBPF6Q5VWK0 638 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 NBPF4Q96M43 638 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms