RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 SIRT2Q8IXJ6 389 aa18.28■□□□□ 0.52
AC005840.4-201ENST00000541242 FOXD4L4Q8WXT5 416 aaPredicted RBP18.28■□□□□ 0.52
AC005840.4-201ENST00000541242 SYCE3A1L190 88 aa18.28■□□□□ 0.52
AC005840.4-201ENST00000541242 CYP2E1P05181 493 aaPredicted RBP18.28■□□□□ 0.52
AC005840.4-201ENST00000541242 GSPT1P15170 499 aaKnown RBP18.28■□□□□ 0.52
AC005840.4-201ENST00000541242 RNF214Q8ND24 703 aa18.28■□□□□ 0.52
AC005840.4-201ENST00000541242 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
AC005840.4-201ENST00000541242 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
AC005840.4-201ENST00000541242 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.52
AC005840.4-201ENST00000541242 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.52
AC005840.4-201ENST00000541242 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.52
AC005840.4-201ENST00000541242 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
AC005840.4-201ENST00000541242 CDC45O75419 566 aa18.27■□□□□ 0.51
AC005840.4-201ENST00000541242 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.51
AC005840.4-201ENST00000541242 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.51
AC005840.4-201ENST00000541242 NME9Q86XW9 330 aa18.27■□□□□ 0.51
AC005840.4-201ENST00000541242 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.51
AC005840.4-201ENST00000541242 NUCB2P80303 420 aa18.26■□□□□ 0.51
AC005840.4-201ENST00000541242 MPNDQ8N594 471 aa18.26■□□□□ 0.51
AC005840.4-201ENST00000541242 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
AC005840.4-201ENST00000541242 ZDHHC9Q9Y397 364 aa18.25■□□□□ 0.51
AC005840.4-201ENST00000541242 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
AC005840.4-201ENST00000541242 DYNC1I1O14576 645 aa18.25■□□□□ 0.51
AC005840.4-201ENST00000541242 LTKP29376 864 aa18.25■□□□□ 0.51
AC005840.4-201ENST00000541242 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
AC005840.4-201ENST00000541242 TECPR2O15040 1411 aa18.24■□□□□ 0.51
AC005840.4-201ENST00000541242 FAM135BQ49AJ0 1406 aa18.24■□□□□ 0.51
AC005840.4-201ENST00000541242 TSC1Q92574 1164 aa18.24■□□□□ 0.51
AC005840.4-201ENST00000541242 RABEP1Q15276 862 aa18.24■□□□□ 0.51
AC005840.4-201ENST00000541242 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
AC005840.4-201ENST00000541242 KNDC1Q76NI1 1749 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 A0A0U1RQG5 324 aaPredicted RBP18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 SASS6Q6UVJ0 657 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 LRSAM1Q6UWE0 723 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 C16orf71Q8IYS4 520 aaPredicted RBP18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
AC005840.4-201ENST00000541242 CPS1P31327 1500 aa18.22■□□□□ 0.51
AC005840.4-201ENST00000541242 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
AC005840.4-201ENST00000541242 CSPP1Q1MSJ5 1256 aa18.22■□□□□ 0.51
AC005840.4-201ENST00000541242 USP26Q9BXU7 913 aa18.21■□□□□ 0.51
AC005840.4-201ENST00000541242 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.5
AC005840.4-201ENST00000541242 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.5
AC005840.4-201ENST00000541242 PLEKHM2Q8IWE5 1019 aa18.21■□□□□ 0.5
AC005840.4-201ENST00000541242 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.5
AC005840.4-201ENST00000541242 CCDC39Q9UFE4 941 aa18.21■□□□□ 0.5
AC005840.4-201ENST00000541242 FCHSD2O94868 740 aa18.2■□□□□ 0.5
AC005840.4-201ENST00000541242 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
AC005840.4-201ENST00000541242 TSPYL6Q8N831 410 aa18.2■□□□□ 0.5
AC005840.4-201ENST00000541242 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
AC005840.4-201ENST00000541242 IL16Q14005 1332 aa18.2■□□□□ 0.5
AC005840.4-201ENST00000541242 HMOX1P09601 288 aa18.2■□□□□ 0.5
AC005840.4-201ENST00000541242 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
AC005840.4-201ENST00000541242 PHACTR3Q96KR7 559 aa18.19■□□□□ 0.5
AC005840.4-201ENST00000541242 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
AC005840.4-201ENST00000541242 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
AC005840.4-201ENST00000541242 NUTM2FA1L443 756 aa18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 RRS1Q15050 365 aaKnown RBP18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 DNTTIP2Q5QJE6 756 aaKnown RBP18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 ZNF830Q96NB3 372 aaPredicted RBP18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 MON2Q7Z3U7 1717 aa18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
AC005840.4-201ENST00000541242 IL13P35225 146 aa18.16■□□□□ 0.5
AC005840.4-201ENST00000541242 MTERF4Q7Z6M4 381 aaKnown RBP18.16■□□□□ 0.5
AC005840.4-201ENST00000541242 APBB1O00213 710 aa18.16■□□□□ 0.5
AC005840.4-201ENST00000541242 MCM5P33992 734 aa18.16■□□□□ 0.5
AC005840.4-201ENST00000541242 TTC22Q5TAA0 569 aa18.16■□□□□ 0.5
AC005840.4-201ENST00000541242 PLEKHG1Q9ULL1 1385 aa18.16■□□□□ 0.5
AC005840.4-201ENST00000541242 AKAP12Q02952 1782 aa18.15■□□□□ 0.5
AC005840.4-201ENST00000541242 FOXD4L6Q3SYB3 417 aaPredicted RBP18.15■□□□□ 0.5
AC005840.4-201ENST00000541242 FOXD4L3Q6VB84 417 aaPredicted RBP18.15■□□□□ 0.5
AC005840.4-201ENST00000541242 COG3Q96JB2 828 aa18.15■□□□□ 0.5
AC005840.4-201ENST00000541242 CCDC94Q9BW85 323 aaPredicted RBP18.15■□□□□ 0.5
AC005840.4-201ENST00000541242 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
AC005840.4-201ENST00000541242 VAMP4O75379 141 aa18.15■□□□□ 0.5
AC005840.4-201ENST00000541242 C17orf53Q8N3J3 647 aaPredicted RBP18.14■□□□□ 0.5
AC005840.4-201ENST00000541242 CWC22Q9HCG8 908 aaKnown RBP18.14■□□□□ 0.5
AC005840.4-201ENST00000541242 C3P01024 1663 aa18.14■□□□□ 0.49
AC005840.4-201ENST00000541242 AATKQ6ZMQ8 1374 aa18.14■□□□□ 0.49
AC005840.4-201ENST00000541242 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
AC005840.4-201ENST00000541242 ZNF710Q8N1W2 664 aa18.13■□□□□ 0.49
AC005840.4-201ENST00000541242 SMARCA5O60264 1052 aaPredicted RBP18.13■□□□□ 0.49
AC005840.4-201ENST00000541242 ST18O60284 1047 aa18.13■□□□□ 0.49
AC005840.4-201ENST00000541242 ITSN1Q15811 1721 aa18.13■□□□□ 0.49
AC005840.4-201ENST00000541242 CDK12Q9NYV4 1490 aaPredicted RBP18.12■□□□□ 0.49
AC005840.4-201ENST00000541242 ZSCAN20P17040 1043 aaPredicted RBP18.12■□□□□ 0.49
AC005840.4-201ENST00000541242 CBX1P83916 185 aa18.12■□□□□ 0.49
AC005840.4-201ENST00000541242 TCHHQ07283 1943 aa18.12■□□□□ 0.49
AC005840.4-201ENST00000541242 SDSP20132 328 aa18.12■□□□□ 0.49
AC005840.4-201ENST00000541242 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
AC005840.4-201ENST00000541242 MYRIPQ8NFW9 859 aa18.12■□□□□ 0.49
AC005840.4-201ENST00000541242 DMTNQ08495 405 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms