RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 KAT6BQ8WYB5 2073 aa27.17■■□□□ 1.94
RAP1B-223ENST00000541167 NHSQ6T4R5 1651 aa27.15■■□□□ 1.94
RAP1B-223ENST00000541167 DDX10Q13206 875 aaKnown RBP27.15■■□□□ 1.94
RAP1B-223ENST00000541167 IGSF1Q8N6C5 1336 aa27.15■■□□□ 1.94
RAP1B-223ENST00000541167 APBA3O96018 575 aa27.13■■□□□ 1.93
RAP1B-223ENST00000541167 DOT1LQ8TEK3 1739 aa27.13■■□□□ 1.93
RAP1B-223ENST00000541167 EN1Q05925 392 aaPredicted RBP27.12■■□□□ 1.93
RAP1B-223ENST00000541167 IL13P35225 146 aa27.1■■□□□ 1.93
RAP1B-223ENST00000541167 PCDH11XQ9BZA7 1347 aa27.1■■□□□ 1.93
RAP1B-223ENST00000541167 PCDH11YQ9BZA8 1340 aa27.1■■□□□ 1.93
RAP1B-223ENST00000541167 SRCAPQ6ZRS2 3230 aa27.1■■□□□ 1.93
RAP1B-223ENST00000541167 ACSBG1Q96GR2 724 aa27.09■■□□□ 1.93
RAP1B-223ENST00000541167 BCL11BQ9C0K0 894 aaPredicted RBP27.09■■□□□ 1.93
RAP1B-223ENST00000541167 COL3A1P02461 1466 aaPredicted RBP27.08■■□□□ 1.93
RAP1B-223ENST00000541167 RGPD3A6NKT7 1758 aaPredicted RBP27.07■■□□□ 1.92
RAP1B-223ENST00000541167 RGPD4Q7Z3J3 1758 aa27.07■■□□□ 1.92
RAP1B-223ENST00000541167 PTF1AQ7RTS3 328 aa27.07■■□□□ 1.92
RAP1B-223ENST00000541167 BTAF1O14981 1849 aa27.06■■□□□ 1.92
RAP1B-223ENST00000541167 RREB1Q92766 1687 aa27.06■■□□□ 1.92
RAP1B-223ENST00000541167 DIAPH1O60610 1272 aaKnown RBP27.06■■□□□ 1.92
RAP1B-223ENST00000541167 PPP2R1AP30153 589 aa27.06■■□□□ 1.92
RAP1B-223ENST00000541167 SPG7Q9UQ90 795 aa27.06■■□□□ 1.92
RAP1B-223ENST00000541167 KCNQ2O43526 872 aa27.05■■□□□ 1.92
RAP1B-223ENST00000541167 EZH2Q15910 746 aaKnown RBP27.05■■□□□ 1.92
RAP1B-223ENST00000541167 AEBP1Q8IUX7 1158 aa27.05■■□□□ 1.92
RAP1B-223ENST00000541167 PARD3Q8TEW0 1356 aa27.05■■□□□ 1.92
RAP1B-223ENST00000541167 SULT6B1Q6IMI4 303 aa27.04■■□□□ 1.92
RAP1B-223ENST00000541167 CFAP53Q96M91 514 aa27.04■■□□□ 1.92
RAP1B-223ENST00000541167 CAMKK2Q96RR4 588 aa27.03■■□□□ 1.92
RAP1B-223ENST00000541167 PLEKHG2Q9H7P9 1386 aa27.03■■□□□ 1.92
RAP1B-223ENST00000541167 KDRP35968 1356 aa27.02■■□□□ 1.92
RAP1B-223ENST00000541167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.02■■□□□ 1.92
RAP1B-223ENST00000541167 NUP188Q5SRE5 1749 aa27.02■■□□□ 1.92
RAP1B-223ENST00000541167 CYP27B1O15528 508 aa27.01■■□□□ 1.91
RAP1B-223ENST00000541167 TOGARAM1Q9Y4F4 1720 aa27■■□□□ 1.91
RAP1B-223ENST00000541167 SYTL4Q96C24 671 aaPredicted RBP26.99■■□□□ 1.91
RAP1B-223ENST00000541167 ZNF316A6NFI3 1004 aaPredicted RBP26.98■■□□□ 1.91
RAP1B-223ENST00000541167 HMOX1P09601 288 aa26.98■■□□□ 1.91
RAP1B-223ENST00000541167 ITGB4P16144 1822 aa26.97■■□□□ 1.91
RAP1B-223ENST00000541167 U2SURPO15042 1029 aaKnown RBP26.97■■□□□ 1.91
RAP1B-223ENST00000541167 PLSCR1O15162 318 aa26.97■■□□□ 1.91
RAP1B-223ENST00000541167 PRIM1P49642 420 aaKnown RBP26.97■■□□□ 1.91
RAP1B-223ENST00000541167 PLEKHO1Q53GL0 409 aaPredicted RBP26.97■■□□□ 1.91
RAP1B-223ENST00000541167 IFNL2Q8IZJ0 200 aa26.96■■□□□ 1.91
RAP1B-223ENST00000541167 RALBP1Q15311 655 aa26.95■■□□□ 1.9
RAP1B-223ENST00000541167 AMOTQ4VCS5 1084 aa26.95■■□□□ 1.9
RAP1B-223ENST00000541167 PHKG2P15735 406 aa26.94■■□□□ 1.9
RAP1B-223ENST00000541167 ZNF530Q6P9A1 599 aaPredicted RBP26.93■■□□□ 1.9
RAP1B-223ENST00000541167 NKX1-1Q15270 411 aaPredicted RBP26.92■■□□□ 1.9
RAP1B-223ENST00000541167 NUDCQ9Y266 331 aa26.92■■□□□ 1.9
RAP1B-223ENST00000541167 LY75O60449 1722 aa26.88■■□□□ 1.89
RAP1B-223ENST00000541167 TXNRD1Q16881 649 aa26.88■■□□□ 1.89
RAP1B-223ENST00000541167 C1orf141Q5JVX7 400 aa26.88■■□□□ 1.89
RAP1B-223ENST00000541167 HSP90AB1P08238 724 aaKnown RBP26.87■■□□□ 1.89
RAP1B-223ENST00000541167 MPRIPQ6WCQ1 1025 aa26.87■■□□□ 1.89
RAP1B-223ENST00000541167 VIRMAQ69YN4 1812 aaKnown RBP26.87■■□□□ 1.89
RAP1B-223ENST00000541167 PROM2Q8N271 834 aa26.86■■□□□ 1.89
RAP1B-223ENST00000541167 MYBBP1AQ9BQG0 1328 aaKnown RBP26.86■■□□□ 1.89
RAP1B-223ENST00000541167 U2AF1L5P0DN76 240 aaPredicted RBP26.85■■□□□ 1.89
RAP1B-223ENST00000541167 U2AF1Q01081 240 aaKnown RBP eCLIP26.85■■□□□ 1.89
RAP1B-223ENST00000541167 NBPF14Q5TI25 921 aa26.85■■□□□ 1.89
RAP1B-223ENST00000541167 SCN11AQ9UI33 1791 aa26.84■■□□□ 1.89
RAP1B-223ENST00000541167 PSDA5PKW4 1024 aaPredicted RBP26.84■■□□□ 1.89
RAP1B-223ENST00000541167 KDM6AO15550 1401 aaPredicted RBP26.83■■□□□ 1.89
RAP1B-223ENST00000541167 DCAF5Q96JK2 942 aa26.83■■□□□ 1.89
RAP1B-223ENST00000541167 R3HDM1Q15032 1099 aaKnown RBP26.82■■□□□ 1.88
RAP1B-223ENST00000541167 TMOD3Q9NYL9 352 aa26.82■■□□□ 1.88
RAP1B-223ENST00000541167 PRKAR2BP31323 418 aa26.81■■□□□ 1.88
RAP1B-223ENST00000541167 MTHFSDQ2M296 383 aaKnown RBP26.81■■□□□ 1.88
RAP1B-223ENST00000541167 AKAP4Q5JQC9 854 aa26.81■■□□□ 1.88
RAP1B-223ENST00000541167 RSPH6AQ9H0K4 717 aa26.81■■□□□ 1.88
RAP1B-223ENST00000541167 PRKRIP1Q9H875 184 aaPredicted RBP26.81■■□□□ 1.88
RAP1B-223ENST00000541167 PIGBQ92521 554 aa26.8■■□□□ 1.88
RAP1B-223ENST00000541167 PAPPAQ13219 1627 aa26.79■■□□□ 1.88
RAP1B-223ENST00000541167 ERVV-2B6SEH9 535 aa26.78■■□□□ 1.88
RAP1B-223ENST00000541167 PALLDQ8WX93 1383 aa26.78■■□□□ 1.88
RAP1B-223ENST00000541167 SLC27A3Q5K4L6 730 aa26.77■■□□□ 1.88
RAP1B-223ENST00000541167 ANO8Q9HCE9 1232 aaPredicted RBP26.77■■□□□ 1.88
RAP1B-223ENST00000541167 GAS2L2Q8NHY3 880 aa26.76■■□□□ 1.87
RAP1B-223ENST00000541167 FCHSD2O94868 740 aa26.75■■□□□ 1.87
RAP1B-223ENST00000541167 CABP4P57796 275 aa26.75■■□□□ 1.87
RAP1B-223ENST00000541167 SMARCC1Q92922 1105 aaPredicted RBP26.75■■□□□ 1.87
RAP1B-223ENST00000541167 LRRC4BQ9NT99 713 aa26.75■■□□□ 1.87
RAP1B-223ENST00000541167 CCNL1Q9UK58 526 aaPredicted RBP26.75■■□□□ 1.87
RAP1B-223ENST00000541167 ADAMTS7Q9UKP4 1686 aa26.75■■□□□ 1.87
RAP1B-223ENST00000541167 STK32BQ9NY57 414 aa26.74■■□□□ 1.87
RAP1B-223ENST00000541167 C5P01031 1676 aa26.73■■□□□ 1.87
RAP1B-223ENST00000541167 KCNQ4P56696 695 aa26.73■■□□□ 1.87
RAP1B-223ENST00000541167 PHACTR3Q96KR7 559 aa26.73■■□□□ 1.87
RAP1B-223ENST00000541167 TAF1LQ8IZX4 1826 aa26.73■■□□□ 1.87
RAP1B-223ENST00000541167 MAP3K5Q99683 1374 aa26.72■■□□□ 1.87
RAP1B-223ENST00000541167 ASAP1Q9ULH1 1129 aa26.71■■□□□ 1.87
RAP1B-223ENST00000541167 MRC1P22897 1456 aa26.7■■□□□ 1.87
RAP1B-223ENST00000541167 RNMTO43148 476 aaKnown RBP26.7■■□□□ 1.86
RAP1B-223ENST00000541167 LGR6Q9HBX8 967 aa26.7■■□□□ 1.86
RAP1B-223ENST00000541167 GNAT3A8MTJ3 354 aa26.69■■□□□ 1.86
RAP1B-223ENST00000541167 NEFMP07197 916 aa26.69■■□□□ 1.86
RAP1B-223ENST00000541167 SLC15A2Q16348 729 aa26.69■■□□□ 1.86
RAP1B-223ENST00000541167 ATG3Q9NT62 314 aa26.69■■□□□ 1.86
RAP1B-223ENST00000541167 TUBGCP6Q96RT7 1819 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms