RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ANKRD44Q8N8A2 993 aa15.22■□□□□ 0.03
NPC1-202ENST00000540608 ITSN1Q15811 1721 aa15.21■□□□□ 0.03
NPC1-202ENST00000540608 TNRQ92752 1358 aa15.21■□□□□ 0.03
NPC1-202ENST00000540608 SSFA2P28290 1259 aa15.21■□□□□ 0.03
NPC1-202ENST00000540608 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.03
NPC1-202ENST00000540608 GOLGA6L22H0YM25 854 aa15.21■□□□□ 0.03
NPC1-202ENST00000540608 HDGFP51858 240 aaKnown RBP15.21■□□□□ 0.03
NPC1-202ENST00000540608 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.02
NPC1-202ENST00000540608 C16orf71Q8IYS4 520 aaPredicted RBP15.2■□□□□ 0.02
NPC1-202ENST00000540608 USP26Q9BXU7 913 aa15.2■□□□□ 0.02
NPC1-202ENST00000540608 UBR1Q8IWV7 1749 aa15.19■□□□□ 0.02
NPC1-202ENST00000540608 ADAMTS13Q76LX8 1427 aa15.19■□□□□ 0.02
NPC1-202ENST00000540608 ATP10DQ9P241 1426 aa15.19■□□□□ 0.02
NPC1-202ENST00000540608 CHL1O00533 1208 aa15.19■□□□□ 0.02
NPC1-202ENST00000540608 BAG4O95429 457 aaKnown RBP15.19■□□□□ 0.02
NPC1-202ENST00000540608 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
NPC1-202ENST00000540608 RGS12O14924 1447 aa15.18■□□□□ 0.02
NPC1-202ENST00000540608 NUTM2FA1L443 756 aa15.18■□□□□ 0.02
NPC1-202ENST00000540608 ESPNB1AK53 854 aa15.18■□□□□ 0.02
NPC1-202ENST00000540608 CEP85Q6P2H3 762 aa15.18■□□□□ 0.02
NPC1-202ENST00000540608 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.17■□□□□ 0.02
NPC1-202ENST00000540608 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
NPC1-202ENST00000540608 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
NPC1-202ENST00000540608 KLHL40Q2TBA0 621 aa15.17■□□□□ 0.02
NPC1-202ENST00000540608 PTPRCP08575 1304 aa15.17■□□□□ 0.02
NPC1-202ENST00000540608 IBTKQ9P2D0 1353 aaPredicted RBP15.17■□□□□ 0.02
NPC1-202ENST00000540608 NUCB2P80303 420 aa15.17■□□□□ 0.02
NPC1-202ENST00000540608 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
NPC1-202ENST00000540608 NRKQ7Z2Y5 1582 aa15.16■□□□□ 0.02
NPC1-202ENST00000540608 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
NPC1-202ENST00000540608 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
NPC1-202ENST00000540608 ACEP12821 1306 aa15.16■□□□□ 0.02
NPC1-202ENST00000540608 SDSP20132 328 aa15.16■□□□□ 0.02
NPC1-202ENST00000540608 LTKP29376 864 aa15.16■□□□□ 0.02
NPC1-202ENST00000540608 CASC1Q6TDU7 716 aa15.16■□□□□ 0.02
NPC1-202ENST00000540608 RTL1A6NKG5 1358 aa15.15■□□□□ 0.02
NPC1-202ENST00000540608 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
NPC1-202ENST00000540608 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
NPC1-202ENST00000540608 NAP1L5Q96NT1 182 aaPredicted RBP15.15■□□□□ 0.02
NPC1-202ENST00000540608 DDX49Q9Y6V7 483 aaKnown RBP15.15■□□□□ 0.02
NPC1-202ENST00000540608 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
NPC1-202ENST00000540608 CWC22Q9HCG8 908 aaKnown RBP15.14■□□□□ 0.01
NPC1-202ENST00000540608 ERBB4Q15303 1308 aa15.14■□□□□ 0.01
NPC1-202ENST00000540608 OVOS2A0A0J9YW53 1432 aa15.14■□□□□ 0.01
NPC1-202ENST00000540608 OVOS2Q6IE36 1432 aa15.14■□□□□ 0.01
NPC1-202ENST00000540608 TOPAZ1Q8N9V7 1692 aa15.14■□□□□ 0.01
NPC1-202ENST00000540608 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
NPC1-202ENST00000540608 MCM10Q7L590 875 aa15.13■□□□□ 0.01
NPC1-202ENST00000540608 MSH6P52701 1360 aa15.13■□□□□ 0.01
NPC1-202ENST00000540608 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
NPC1-202ENST00000540608 CCDC173Q0VFZ6 552 aa15.13■□□□□ 0.01
NPC1-202ENST00000540608 PPP1R9BQ96SB3 815 aa15.13■□□□□ 0.01
NPC1-202ENST00000540608 MEIS3Q99687 375 aa15.13■□□□□ 0.01
NPC1-202ENST00000540608 USP6P35125 1406 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 PLEKHG3A1L390 1219 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 ST18O60284 1047 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 UBE2Q2Q8WVN8 375 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 REC8O95072 547 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 PLEKHG1Q9ULL1 1385 aa15.12■□□□□ 0.01
NPC1-202ENST00000540608 PTPRUQ92729 1446 aa15.11■□□□□ 0.01
NPC1-202ENST00000540608 SOX12O15370 315 aa15.11■□□□□ 0.01
NPC1-202ENST00000540608 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
NPC1-202ENST00000540608 ZNF445P59923 1031 aa15.11■□□□□ 0.01
NPC1-202ENST00000540608 MCTP1Q6DN14 999 aa15.11■□□□□ 0.01
NPC1-202ENST00000540608 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
NPC1-202ENST00000540608 LMBRD1Q9NUN5 540 aa15.11■□□□□ 0.01
NPC1-202ENST00000540608 CRB1P82279 1406 aa15.1■□□□□ 0.01
NPC1-202ENST00000540608 HMMRO75330 724 aa15.1■□□□□ 0.01
NPC1-202ENST00000540608 OSBPL3Q9H4L5 887 aa15.1■□□□□ 0.01
NPC1-202ENST00000540608 AK9Q5TCS8 1911 aa15.1■□□□□ 0.01
NPC1-202ENST00000540608 APBB1O00213 710 aa15.1■□□□□ 0.01
NPC1-202ENST00000540608 ERC2O15083 957 aa15.1■□□□□ 0.01
NPC1-202ENST00000540608 CEBPAP49715 358 aaPredicted RBP15.1■□□□□ 0.01
NPC1-202ENST00000540608 NALCNQ8IZF0 1738 aa15.1■□□□□ 0.01
NPC1-202ENST00000540608 ANP32BQ92688 251 aaKnown RBP15.09■□□□□ 0.01
NPC1-202ENST00000540608 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
NPC1-202ENST00000540608 USP31Q70CQ4 1352 aa15.08■□□□□ 0
NPC1-202ENST00000540608 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0
NPC1-202ENST00000540608 PKP1Q13835 747 aa15.08■□□□□ 0
NPC1-202ENST00000540608 SSH2Q76I76 1423 aa15.07■□□□□ 0
NPC1-202ENST00000540608 PDE1AP54750 535 aa15.07■□□□□ 0
NPC1-202ENST00000540608 FER1L4A9Z1Z3 1794 aa15.07■□□□□ 0
NPC1-202ENST00000540608 ZSCAN23Q3MJ62 389 aa15.07■□□□□ 0
NPC1-202ENST00000540608 ZGPATQ8N5A5 531 aaKnown RBP15.07■□□□□ 0
NPC1-202ENST00000540608 CAVIN1Q6NZI2 390 aaKnown RBP15.06■□□□□ 0
NPC1-202ENST00000540608 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
NPC1-202ENST00000540608 MAP3K19Q56UN5 1328 aa15.06■□□□□ 0
NPC1-202ENST00000540608 NCLP19338 710 aaKnown RBP15.06■□□□□ 0
NPC1-202ENST00000540608 AMOTL2Q9Y2J4 779 aa15.06■□□□□ 0
NPC1-202ENST00000540608 FOXO3O43524 673 aa15.05■□□□□ 0
NPC1-202ENST00000540608 MIS18AQ9NYP9 233 aa15.05■□□□□ 0
NPC1-202ENST00000540608 G2E3Q7L622 706 aa15.05■□□□□ -0
NPC1-202ENST00000540608 ARHGEF10O15013 1369 aa15.04■□□□□ -0
NPC1-202ENST00000540608 PRPF40AO75400 957 aaKnown RBP15.04■□□□□ -0
NPC1-202ENST00000540608 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
NPC1-202ENST00000540608 ZSCAN30Q86W11 494 aa15.04■□□□□ -0
NPC1-202ENST00000540608 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
NPC1-202ENST00000540608 RIMS1Q86UR5 1692 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms