RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CFAP74Q9C0B2 1584 aa17.46■□□□□ 0.39
INO80E-203ENST00000540562 FKBP5Q13451 457 aaPredicted RBP17.46■□□□□ 0.39
INO80E-203ENST00000540562 FAM43AQ8N2R8 423 aa17.46■□□□□ 0.39
INO80E-203ENST00000540562 TRIM6-TRIM34B2RNG4 842 aa17.46■□□□□ 0.38
INO80E-203ENST00000540562 LARP6Q9BRS8 491 aaKnown RBP17.46■□□□□ 0.38
INO80E-203ENST00000540562 MAP3K19Q56UN5 1328 aa17.46■□□□□ 0.38
INO80E-203ENST00000540562 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
INO80E-203ENST00000540562 TTC22Q5TAA0 569 aa17.45■□□□□ 0.38
INO80E-203ENST00000540562 IL1RAPL2Q9NP60 686 aa17.45■□□□□ 0.38
INO80E-203ENST00000540562 GBP4Q96PP9 640 aa17.45■□□□□ 0.38
INO80E-203ENST00000540562 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
INO80E-203ENST00000540562 MED14O60244 1454 aa17.44■□□□□ 0.38
INO80E-203ENST00000540562 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
INO80E-203ENST00000540562 ANXA1P04083 346 aa17.44■□□□□ 0.38
INO80E-203ENST00000540562 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
INO80E-203ENST00000540562 DCTPP1Q9H773 170 aa17.44■□□□□ 0.38
INO80E-203ENST00000540562 NLRP6P59044 892 aa17.43■□□□□ 0.38
INO80E-203ENST00000540562 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
INO80E-203ENST00000540562 RICTORQ6R327 1708 aa17.43■□□□□ 0.38
INO80E-203ENST00000540562 CAVIN1Q6NZI2 390 aaKnown RBP17.42■□□□□ 0.38
INO80E-203ENST00000540562 RAB3GAP1Q15042 981 aa17.42■□□□□ 0.38
INO80E-203ENST00000540562 RBM27Q9P2N5 1060 aaKnown RBP17.42■□□□□ 0.38
INO80E-203ENST00000540562 CLTCQ00610 1675 aaKnown RBP17.41■□□□□ 0.38
INO80E-203ENST00000540562 ANKRD44Q8N8A2 993 aa17.41■□□□□ 0.38
INO80E-203ENST00000540562 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
INO80E-203ENST00000540562 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
INO80E-203ENST00000540562 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 CHL1O00533 1208 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 TRIM44Q96DX7 344 aaPredicted RBP17.4■□□□□ 0.38
INO80E-203ENST00000540562 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
INO80E-203ENST00000540562 PTCH1Q13635 1447 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 MPNDQ8N594 471 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 SNX21Q969T3 373 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 EYA1Q99502 592 aa17.4■□□□□ 0.38
INO80E-203ENST00000540562 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.37
INO80E-203ENST00000540562 ERBB4Q15303 1308 aa17.39■□□□□ 0.37
INO80E-203ENST00000540562 PRPF40AO75400 957 aaKnown RBP17.39■□□□□ 0.37
INO80E-203ENST00000540562 NEK4P51957 841 aa17.39■□□□□ 0.37
INO80E-203ENST00000540562 XPCQ01831 940 aaPredicted RBP17.39■□□□□ 0.37
INO80E-203ENST00000540562 ANO2Q9NQ90 1003 aa17.39■□□□□ 0.37
INO80E-203ENST00000540562 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
INO80E-203ENST00000540562 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
INO80E-203ENST00000540562 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
INO80E-203ENST00000540562 NUTM1Q86Y26 1132 aa17.39■□□□□ 0.37
INO80E-203ENST00000540562 USP26Q9BXU7 913 aa17.39■□□□□ 0.37
INO80E-203ENST00000540562 BAG4O95429 457 aaKnown RBP17.38■□□□□ 0.37
INO80E-203ENST00000540562 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
INO80E-203ENST00000540562 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
INO80E-203ENST00000540562 MRE11P49959 708 aa17.38■□□□□ 0.37
INO80E-203ENST00000540562 DDIT3P35638 169 aa17.37■□□□□ 0.37
INO80E-203ENST00000540562 ATP7BP35670 1465 aa17.37■□□□□ 0.37
INO80E-203ENST00000540562 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
INO80E-203ENST00000540562 GDPD2Q9HCC8 539 aa17.37■□□□□ 0.37
INO80E-203ENST00000540562 PHAXQ9H814 394 aaKnown RBP17.36■□□□□ 0.37
INO80E-203ENST00000540562 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
INO80E-203ENST00000540562 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
INO80E-203ENST00000540562 GOLGA6L22H0YM25 854 aa17.36■□□□□ 0.37
INO80E-203ENST00000540562 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
INO80E-203ENST00000540562 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
INO80E-203ENST00000540562 RNF214Q8ND24 703 aa17.35■□□□□ 0.37
INO80E-203ENST00000540562 PALD1Q9ULE6 856 aa17.35■□□□□ 0.37
INO80E-203ENST00000540562 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
INO80E-203ENST00000540562 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
INO80E-203ENST00000540562 CDK12Q9NYV4 1490 aaPredicted RBP17.34■□□□□ 0.37
INO80E-203ENST00000540562 PDE1AP54750 535 aa17.34■□□□□ 0.37
INO80E-203ENST00000540562 FLIIQ13045 1269 aa17.34■□□□□ 0.37
INO80E-203ENST00000540562 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
INO80E-203ENST00000540562 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
INO80E-203ENST00000540562 ATP10DQ9P241 1426 aa17.33■□□□□ 0.37
INO80E-203ENST00000540562 RABEP1Q15276 862 aa17.33■□□□□ 0.36
INO80E-203ENST00000540562 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
INO80E-203ENST00000540562 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
INO80E-203ENST00000540562 HDGFP51858 240 aaKnown RBP17.32■□□□□ 0.36
INO80E-203ENST00000540562 IL25Q9H293 177 aa17.32■□□□□ 0.36
INO80E-203ENST00000540562 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
INO80E-203ENST00000540562 TNRQ92752 1358 aa17.32■□□□□ 0.36
INO80E-203ENST00000540562 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
INO80E-203ENST00000540562 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
INO80E-203ENST00000540562 RGS12O14924 1447 aa17.31■□□□□ 0.36
INO80E-203ENST00000540562 ST18O60284 1047 aa17.31■□□□□ 0.36
INO80E-203ENST00000540562 HMMRO75330 724 aa17.31■□□□□ 0.36
INO80E-203ENST00000540562 GNAI2P04899 355 aa17.31■□□□□ 0.36
INO80E-203ENST00000540562 NASPP49321 788 aaPredicted RBP17.31■□□□□ 0.36
INO80E-203ENST00000540562 ERC2O15083 957 aa17.3■□□□□ 0.36
INO80E-203ENST00000540562 KCNQ3O43525 872 aa17.3■□□□□ 0.36
INO80E-203ENST00000540562 ARID3AQ99856 593 aa17.3■□□□□ 0.36
INO80E-203ENST00000540562 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
INO80E-203ENST00000540562 ESPNB1AK53 854 aa17.29■□□□□ 0.36
INO80E-203ENST00000540562 NCOA3Q9Y6Q9 1424 aa17.29■□□□□ 0.36
INO80E-203ENST00000540562 SURF6O75683 361 aaKnown RBP17.29■□□□□ 0.36
INO80E-203ENST00000540562 CPA1P15085 419 aa17.29■□□□□ 0.36
INO80E-203ENST00000540562 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
INO80E-203ENST00000540562 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
INO80E-203ENST00000540562 LRRCC1Q9C099 1032 aa17.29■□□□□ 0.36
INO80E-203ENST00000540562 CIZ1Q9ULV3 898 aaPredicted RBP17.29■□□□□ 0.36
INO80E-203ENST00000540562 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
INO80E-203ENST00000540562 MX1P20591 662 aa17.28■□□□□ 0.36
INO80E-203ENST00000540562 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms