RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 NSD2O96028 1365 aa15.16■□□□□ 0.02
SSPN-207ENST00000540266 MSH5O43196 834 aa15.16■□□□□ 0.02
SSPN-207ENST00000540266 IGSF1Q8N6C5 1336 aa15.16■□□□□ 0.02
SSPN-207ENST00000540266 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
SSPN-207ENST00000540266 NFAT5O94916 1531 aa15.15■□□□□ 0.02
SSPN-207ENST00000540266 PIK3C2AO00443 1686 aa15.15■□□□□ 0.02
SSPN-207ENST00000540266 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
SSPN-207ENST00000540266 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
SSPN-207ENST00000540266 NMRK2Q9NPI5 230 aa15.14■□□□□ 0.01
SSPN-207ENST00000540266 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
SSPN-207ENST00000540266 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
SSPN-207ENST00000540266 NBPF1Q3BBV0 1214 aa15.13■□□□□ 0.01
SSPN-207ENST00000540266 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
SSPN-207ENST00000540266 TTC21AQ8NDW8 1320 aa15.12■□□□□ 0.01
SSPN-207ENST00000540266 TUBGCP6Q96RT7 1819 aa15.11■□□□□ 0.01
SSPN-207ENST00000540266 FSTL1Q12841 308 aa15.11■□□□□ 0.01
SSPN-207ENST00000540266 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
SSPN-207ENST00000540266 SYTL4Q96C24 671 aaPredicted RBP15.11■□□□□ 0.01
SSPN-207ENST00000540266 CENPJQ9HC77 1338 aaPredicted RBP15.11■□□□□ 0.01
SSPN-207ENST00000540266 ANKRD24Q8TF21 1146 aa15.1■□□□□ 0.01
SSPN-207ENST00000540266 RGPD5Q99666 1765 aa15.1■□□□□ 0.01
SSPN-207ENST00000540266 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
SSPN-207ENST00000540266 CICQ96RK0 1608 aaPredicted RBP15.07■□□□□ 0
SSPN-207ENST00000540266 USP31Q70CQ4 1352 aa15.07■□□□□ 0
SSPN-207ENST00000540266 WDR90Q96KV7 1748 aa15.06■□□□□ 0
SSPN-207ENST00000540266 FKBP8Q14318 412 aa15.06■□□□□ 0
SSPN-207ENST00000540266 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
SSPN-207ENST00000540266 LY75O60449 1722 aa15.05■□□□□ -0
SSPN-207ENST00000540266 USP47Q96K76 1375 aa15.04■□□□□ -0
SSPN-207ENST00000540266 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
SSPN-207ENST00000540266 HSPA1AP0DMV8 641 aaKnown RBP15.03■□□□□ -0
SSPN-207ENST00000540266 HSPA1BP0DMV9 641 aaKnown RBP15.03■□□□□ -0
SSPN-207ENST00000540266 ZCRB1Q8TBF4 217 aaKnown RBP15.02■□□□□ -0
SSPN-207ENST00000540266 EVC2Q86UK5 1308 aa15.01□□□□□ -0.01
SSPN-207ENST00000540266 SMIM5Q71RC9 77 aa15.01□□□□□ -0.01
SSPN-207ENST00000540266 C16orf71Q8IYS4 520 aaPredicted RBP15.01□□□□□ -0.01
SSPN-207ENST00000540266 KTN1Q86UP2 1357 aaKnown RBP15□□□□□ -0.01
SSPN-207ENST00000540266 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
SSPN-207ENST00000540266 TGFB2P61812 414 aa15□□□□□ -0.01
SSPN-207ENST00000540266 ARHGAP27Q6ZUM4 889 aa15□□□□□ -0.01
SSPN-207ENST00000540266 IP6K1Q92551 441 aa15□□□□□ -0.01
SSPN-207ENST00000540266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.99□□□□□ -0.01
SSPN-207ENST00000540266 NME9Q86XW9 330 aa14.99□□□□□ -0.01
SSPN-207ENST00000540266 BCS1LQ9Y276 419 aa14.99□□□□□ -0.01
SSPN-207ENST00000540266 PXDNLA1KZ92 1463 aa14.99□□□□□ -0.01
SSPN-207ENST00000540266 C10orf71Q711Q0 1435 aa14.99□□□□□ -0.01
SSPN-207ENST00000540266 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
SSPN-207ENST00000540266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
SSPN-207ENST00000540266 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
SSPN-207ENST00000540266 A0A0G2JLW4 131 aa14.97□□□□□ -0.01
SSPN-207ENST00000540266 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
SSPN-207ENST00000540266 RRAGCQ9HB90 399 aa14.97□□□□□ -0.01
SSPN-207ENST00000540266 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
SSPN-207ENST00000540266 SSFA2P28290 1259 aa14.96□□□□□ -0.01
SSPN-207ENST00000540266 AK7Q96M32 723 aa14.96□□□□□ -0.01
SSPN-207ENST00000540266 KIAA1210Q9ULL0 1709 aa14.96□□□□□ -0.01
SSPN-207ENST00000540266 PALLDQ8WX93 1383 aa14.96□□□□□ -0.02
SSPN-207ENST00000540266 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
SSPN-207ENST00000540266 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
SSPN-207ENST00000540266 PHF14O94880 888 aa14.95□□□□□ -0.02
SSPN-207ENST00000540266 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
SSPN-207ENST00000540266 PLEKHG2Q9H7P9 1386 aa14.95□□□□□ -0.02
SSPN-207ENST00000540266 USP54Q70EL1 1684 aa14.94□□□□□ -0.02
SSPN-207ENST00000540266 MMP10P09238 476 aa14.94□□□□□ -0.02
SSPN-207ENST00000540266 KCNA3P22001 575 aa14.94□□□□□ -0.02
SSPN-207ENST00000540266 MEGF6O75095 1541 aa14.93□□□□□ -0.02
SSPN-207ENST00000540266 DPEP1P16444 411 aa14.93□□□□□ -0.02
SSPN-207ENST00000540266 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
SSPN-207ENST00000540266 DOT1LQ8TEK3 1739 aa14.92□□□□□ -0.02
SSPN-207ENST00000540266 FCHSD2O94868 740 aa14.92□□□□□ -0.02
SSPN-207ENST00000540266 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
SSPN-207ENST00000540266 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
SSPN-207ENST00000540266 C5P01031 1676 aa14.91□□□□□ -0.02
SSPN-207ENST00000540266 SMARCC1Q92922 1105 aaPredicted RBP14.91□□□□□ -0.02
SSPN-207ENST00000540266 TOGARAM1Q9Y4F4 1720 aa14.91□□□□□ -0.02
SSPN-207ENST00000540266 CD163L1Q9NR16 1453 aa14.9□□□□□ -0.02
SSPN-207ENST00000540266 MPRIPQ6WCQ1 1025 aa14.9□□□□□ -0.02
SSPN-207ENST00000540266 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
SSPN-207ENST00000540266 C4BP0C0L5 1744 aa14.89□□□□□ -0.03
SSPN-207ENST00000540266 HOXC9P31274 260 aa14.89□□□□□ -0.03
SSPN-207ENST00000540266 NBPF6Q5VWK0 638 aa14.89□□□□□ -0.03
SSPN-207ENST00000540266 DCAF5Q96JK2 942 aa14.89□□□□□ -0.03
SSPN-207ENST00000540266 NBPF4Q96M43 638 aa14.89□□□□□ -0.03
SSPN-207ENST00000540266 PRDM10Q9NQV6 1147 aa14.89□□□□□ -0.03
SSPN-207ENST00000540266 KIAA1551Q9HCM1 1747 aa14.88□□□□□ -0.03
SSPN-207ENST00000540266 NLGN1Q8N2Q7 840 aa14.87□□□□□ -0.03
SSPN-207ENST00000540266 PIGBQ92521 554 aa14.87□□□□□ -0.03
SSPN-207ENST00000540266 RNF181Q9P0P0 153 aa14.87□□□□□ -0.03
SSPN-207ENST00000540266 MAP3K19Q56UN5 1328 aa14.87□□□□□ -0.03
SSPN-207ENST00000540266 FAM208AQ9UK61 1670 aaKnown RBP14.87□□□□□ -0.03
SSPN-207ENST00000540266 LOC102724428A0A0B4J2F2 783 aa14.86□□□□□ -0.03
SSPN-207ENST00000540266 FOXN1O15353 648 aa14.86□□□□□ -0.03
SSPN-207ENST00000540266 CYP27B1O15528 508 aa14.86□□□□□ -0.03
SSPN-207ENST00000540266 SIK1P57059 783 aa14.86□□□□□ -0.03
SSPN-207ENST00000540266 ITPK1Q13572 414 aa14.86□□□□□ -0.03
SSPN-207ENST00000540266 GNPATO15228 680 aa14.85□□□□□ -0.03
SSPN-207ENST00000540266 VEGFAP15692 232 aaPredicted RBP14.85□□□□□ -0.03
SSPN-207ENST00000540266 FBLN1P23142 703 aa14.85□□□□□ -0.03
SSPN-207ENST00000540266 TMF1P82094 1093 aa14.85□□□□□ -0.03
SSPN-207ENST00000540266 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms