RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
PXN-209ENST00000540221 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
PXN-209ENST00000540221 RALBP1Q15311 655 aa12.22□□□□□ -0.45
PXN-209ENST00000540221 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
PXN-209ENST00000540221 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
PXN-209ENST00000540221 MEGF6O75095 1541 aa12.21□□□□□ -0.45
PXN-209ENST00000540221 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
PXN-209ENST00000540221 PLSCR1O15162 318 aa12.21□□□□□ -0.45
PXN-209ENST00000540221 APBA3O96018 575 aa12.21□□□□□ -0.45
PXN-209ENST00000540221 NUDCQ9Y266 331 aa12.21□□□□□ -0.45
PXN-209ENST00000540221 KDRP35968 1356 aa12.2□□□□□ -0.46
PXN-209ENST00000540221 HMGB2P26583 209 aaKnown RBP12.2□□□□□ -0.46
PXN-209ENST00000540221 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
PXN-209ENST00000540221 CNGB1Q14028 1251 aaPredicted RBP12.2□□□□□ -0.46
PXN-209ENST00000540221 PLEKHO1Q53GL0 409 aaPredicted RBP12.2□□□□□ -0.46
PXN-209ENST00000540221 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
PXN-209ENST00000540221 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
PXN-209ENST00000540221 HSP90AB1P08238 724 aaKnown RBP12.18□□□□□ -0.46
PXN-209ENST00000540221 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
PXN-209ENST00000540221 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
PXN-209ENST00000540221 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
PXN-209ENST00000540221 CAMKK2Q96RR4 588 aa12.17□□□□□ -0.46
PXN-209ENST00000540221 CYP27B1O15528 508 aa12.16□□□□□ -0.46
PXN-209ENST00000540221 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
PXN-209ENST00000540221 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
PXN-209ENST00000540221 PHKG2P15735 406 aa12.15□□□□□ -0.46
PXN-209ENST00000540221 C1orf141Q5JVX7 400 aa12.15□□□□□ -0.46
PXN-209ENST00000540221 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
PXN-209ENST00000540221 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
PXN-209ENST00000540221 KCNQ2O43526 872 aa12.14□□□□□ -0.47
PXN-209ENST00000540221 PRIM1P49642 420 aaKnown RBP12.14□□□□□ -0.47
PXN-209ENST00000540221 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
PXN-209ENST00000540221 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
PXN-209ENST00000540221 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
PXN-209ENST00000540221 ACSBG1Q96GR2 724 aa12.14□□□□□ -0.47
PXN-209ENST00000540221 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
PXN-209ENST00000540221 PNNQ9H307 717 aaKnown RBP12.14□□□□□ -0.47
PXN-209ENST00000540221 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
PXN-209ENST00000540221 FCHSD2O94868 740 aa12.13□□□□□ -0.47
PXN-209ENST00000540221 EZH2Q15910 746 aaKnown RBP12.13□□□□□ -0.47
PXN-209ENST00000540221 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
PXN-209ENST00000540221 TNS1Q9HBL0 1735 aaKnown RBP12.13□□□□□ -0.47
PXN-209ENST00000540221 PKD1L3Q7Z443 1732 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 ERVV-2B6SEH9 535 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 NEFMP07197 916 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 HMOX1P09601 288 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 AKAP4Q5JQC9 854 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 SMARCC1Q92922 1105 aaPredicted RBP12.12□□□□□ -0.47
PXN-209ENST00000540221 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
PXN-209ENST00000540221 U2AF1L5P0DN76 240 aaPredicted RBP12.11□□□□□ -0.47
PXN-209ENST00000540221 U2AF1Q01081 240 aaKnown RBP eCLIP12.11□□□□□ -0.47
PXN-209ENST00000540221 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
PXN-209ENST00000540221 TMOD3Q9NYL9 352 aa12.11□□□□□ -0.47
PXN-209ENST00000540221 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
PXN-209ENST00000540221 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
PXN-209ENST00000540221 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
PXN-209ENST00000540221 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
PXN-209ENST00000540221 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
PXN-209ENST00000540221 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
PXN-209ENST00000540221 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.47
PXN-209ENST00000540221 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
PXN-209ENST00000540221 ANP32CO43423 234 aa12.07□□□□□ -0.48
PXN-209ENST00000540221 PRKAR2BP31323 418 aa12.07□□□□□ -0.48
PXN-209ENST00000540221 CABP4P57796 275 aa12.07□□□□□ -0.48
PXN-209ENST00000540221 MTHFSDQ2M296 383 aaKnown RBP12.07□□□□□ -0.48
PXN-209ENST00000540221 PROM2Q8N271 834 aa12.07□□□□□ -0.48
PXN-209ENST00000540221 PIGBQ92521 554 aa12.07□□□□□ -0.48
PXN-209ENST00000540221 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
PXN-209ENST00000540221 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
PXN-209ENST00000540221 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
PXN-209ENST00000540221 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
PXN-209ENST00000540221 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
PXN-209ENST00000540221 DOT1LQ8TEK3 1739 aa12.05□□□□□ -0.48
PXN-209ENST00000540221 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
PXN-209ENST00000540221 RREB1Q92766 1687 aa12.04□□□□□ -0.48
PXN-209ENST00000540221 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
PXN-209ENST00000540221 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
PXN-209ENST00000540221 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
PXN-209ENST00000540221 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
PXN-209ENST00000540221 BTAF1O14981 1849 aa12.03□□□□□ -0.48
PXN-209ENST00000540221 RNMTO43148 476 aaKnown RBP12.03□□□□□ -0.48
PXN-209ENST00000540221 TEFQ10587 303 aa12.03□□□□□ -0.48
PXN-209ENST00000540221 R3HDM1Q15032 1099 aaKnown RBP12.03□□□□□ -0.48
PXN-209ENST00000540221 SLC15A2Q16348 729 aa12.03□□□□□ -0.48
PXN-209ENST00000540221 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
PXN-209ENST00000540221 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
PXN-209ENST00000540221 SIK1P57059 783 aa12.02□□□□□ -0.49
PXN-209ENST00000540221 NFATC2IPQ8NCF5 419 aa12.02□□□□□ -0.49
PXN-209ENST00000540221 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
PXN-209ENST00000540221 LRRC4BQ9NT99 713 aa12.02□□□□□ -0.49
PXN-209ENST00000540221 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
PXN-209ENST00000540221 ATG3Q9NT62 314 aa12.01□□□□□ -0.49
PXN-209ENST00000540221 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
PXN-209ENST00000540221 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
PXN-209ENST00000540221 PSDA5PKW4 1024 aaPredicted RBP12□□□□□ -0.49
PXN-209ENST00000540221 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
PXN-209ENST00000540221 NFE2L2Q16236 605 aa12□□□□□ -0.49
PXN-209ENST00000540221 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms