RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
BNIP3-202ENST00000540159 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
BNIP3-202ENST00000540159 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
BNIP3-202ENST00000540159 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
BNIP3-202ENST00000540159 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
BNIP3-202ENST00000540159 SDSP20132 328 aa16.93■□□□□ 0.3
BNIP3-202ENST00000540159 K7ELQ4 463 aaPredicted RBP16.92■□□□□ 0.3
BNIP3-202ENST00000540159 CHL1O00533 1208 aa16.92■□□□□ 0.3
BNIP3-202ENST00000540159 BRPF1P55201 1214 aaPredicted RBP16.92■□□□□ 0.3
BNIP3-202ENST00000540159 NLRP6P59044 892 aa16.92■□□□□ 0.3
BNIP3-202ENST00000540159 DCTPP1Q9H773 170 aa16.92■□□□□ 0.3
BNIP3-202ENST00000540159 TNRQ92752 1358 aa16.92■□□□□ 0.3
BNIP3-202ENST00000540159 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
BNIP3-202ENST00000540159 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
BNIP3-202ENST00000540159 CHMP4BQ9H444 224 aaKnown RBP16.91■□□□□ 0.3
BNIP3-202ENST00000540159 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
BNIP3-202ENST00000540159 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
BNIP3-202ENST00000540159 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
BNIP3-202ENST00000540159 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
BNIP3-202ENST00000540159 EYA1Q99502 592 aa16.9■□□□□ 0.3
BNIP3-202ENST00000540159 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
BNIP3-202ENST00000540159 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
BNIP3-202ENST00000540159 ANKRD44Q8N8A2 993 aa16.9■□□□□ 0.3
BNIP3-202ENST00000540159 NRXN3Q9Y4C0 1643 aa16.89■□□□□ 0.3
BNIP3-202ENST00000540159 GAS2L3Q86XJ1 694 aa16.89■□□□□ 0.29
BNIP3-202ENST00000540159 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.29
BNIP3-202ENST00000540159 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
BNIP3-202ENST00000540159 CDC42BPGQ6DT37 1551 aa16.88■□□□□ 0.29
BNIP3-202ENST00000540159 DTNBO60941 627 aa16.88■□□□□ 0.29
BNIP3-202ENST00000540159 ZGPATQ8N5A5 531 aaKnown RBP16.88■□□□□ 0.29
BNIP3-202ENST00000540159 DLC1Q96QB1 1528 aa16.88■□□□□ 0.29
BNIP3-202ENST00000540159 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
BNIP3-202ENST00000540159 KNDC1Q76NI1 1749 aa16.88■□□□□ 0.29
BNIP3-202ENST00000540159 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
BNIP3-202ENST00000540159 MAP4K4O95819 1239 aaPredicted RBP16.88■□□□□ 0.29
BNIP3-202ENST00000540159 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
BNIP3-202ENST00000540159 SNX21Q969T3 373 aa16.88■□□□□ 0.29
BNIP3-202ENST00000540159 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
BNIP3-202ENST00000540159 RTL1A6NKG5 1358 aa16.87■□□□□ 0.29
BNIP3-202ENST00000540159 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
BNIP3-202ENST00000540159 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
BNIP3-202ENST00000540159 DDX11L8A8MPP1 907 aa16.87■□□□□ 0.29
BNIP3-202ENST00000540159 ANXA1P04083 346 aa16.86■□□□□ 0.29
BNIP3-202ENST00000540159 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
BNIP3-202ENST00000540159 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
BNIP3-202ENST00000540159 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
BNIP3-202ENST00000540159 MCTP1Q6DN14 999 aa16.86■□□□□ 0.29
BNIP3-202ENST00000540159 PNMA6EA0A0J9YXQ4 647 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 ATP10DQ9P241 1426 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 DDIT3P35638 169 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 RGS12O14924 1447 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 GRPEL1Q9HAV7 217 aa16.85■□□□□ 0.29
BNIP3-202ENST00000540159 ABTB2Q8N961 1025 aa16.84■□□□□ 0.29
BNIP3-202ENST00000540159 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
BNIP3-202ENST00000540159 USP6P35125 1406 aa16.84■□□□□ 0.29
BNIP3-202ENST00000540159 XPCQ01831 940 aaPredicted RBP16.84■□□□□ 0.29
BNIP3-202ENST00000540159 DDX49Q9Y6V7 483 aaKnown RBP16.84■□□□□ 0.29
BNIP3-202ENST00000540159 ADAMTS13Q76LX8 1427 aa16.84■□□□□ 0.29
BNIP3-202ENST00000540159 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.29
BNIP3-202ENST00000540159 FSD2A1L4K1 749 aa16.83■□□□□ 0.28
BNIP3-202ENST00000540159 LMOD2Q6P5Q4 547 aa16.83■□□□□ 0.28
BNIP3-202ENST00000540159 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
BNIP3-202ENST00000540159 PHAXQ9H814 394 aaKnown RBP16.83■□□□□ 0.28
BNIP3-202ENST00000540159 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
BNIP3-202ENST00000540159 FLIIQ13045 1269 aa16.82■□□□□ 0.28
BNIP3-202ENST00000540159 LRRFIP2Q9Y608 721 aaKnown RBP16.82■□□□□ 0.28
BNIP3-202ENST00000540159 LARP6Q9BRS8 491 aaKnown RBP16.81■□□□□ 0.28
BNIP3-202ENST00000540159 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
BNIP3-202ENST00000540159 KCNA6P17658 529 aa16.81■□□□□ 0.28
BNIP3-202ENST00000540159 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
BNIP3-202ENST00000540159 PDE1AP54750 535 aa16.81■□□□□ 0.28
BNIP3-202ENST00000540159 CASC1Q6TDU7 716 aa16.8■□□□□ 0.28
BNIP3-202ENST00000540159 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
BNIP3-202ENST00000540159 ANO2Q9NQ90 1003 aa16.8■□□□□ 0.28
BNIP3-202ENST00000540159 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
BNIP3-202ENST00000540159 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
BNIP3-202ENST00000540159 NCOA3Q9Y6Q9 1424 aa16.8■□□□□ 0.28
BNIP3-202ENST00000540159 NEK4P51957 841 aa16.8■□□□□ 0.28
BNIP3-202ENST00000540159 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
BNIP3-202ENST00000540159 CRB1P82279 1406 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 BAG4O95429 457 aaKnown RBP16.79■□□□□ 0.28
BNIP3-202ENST00000540159 GNAI2P04899 355 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
BNIP3-202ENST00000540159 UNC5CLQ8IV45 518 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 PEAK1Q9H792 1746 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 PTPRCP08575 1304 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 HMMRO75330 724 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
BNIP3-202ENST00000540159 C3P01024 1663 aa16.78■□□□□ 0.28
BNIP3-202ENST00000540159 RABEP1Q15276 862 aa16.78■□□□□ 0.28
BNIP3-202ENST00000540159 CEP170BQ9Y4F5 1589 aaPredicted RBP16.78■□□□□ 0.28
BNIP3-202ENST00000540159 AGLP35573 1532 aa16.78■□□□□ 0.28
BNIP3-202ENST00000540159 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
BNIP3-202ENST00000540159 PALD1Q9ULE6 856 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms