RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
UBE3B-210ENST00000539599 CHL1O00533 1208 aa17.54■□□□□ 0.4
UBE3B-210ENST00000539599 LTV1Q96GA3 475 aaPredicted RBP17.53■□□□□ 0.4
UBE3B-210ENST00000539599 AMOTL2Q9Y2J4 779 aa17.53■□□□□ 0.4
UBE3B-210ENST00000539599 TECPR2O15040 1411 aa17.53■□□□□ 0.4
UBE3B-210ENST00000539599 TRAK2O60296 914 aa17.52■□□□□ 0.4
UBE3B-210ENST00000539599 OVOS2A0A0J9YW53 1432 aa17.52■□□□□ 0.4
UBE3B-210ENST00000539599 USP6P35125 1406 aa17.52■□□□□ 0.4
UBE3B-210ENST00000539599 OVOS2Q6IE36 1432 aa17.52■□□□□ 0.4
UBE3B-210ENST00000539599 CEP85Q6P2H3 762 aa17.52■□□□□ 0.4
UBE3B-210ENST00000539599 TNPO1Q92973 898 aaKnown RBP17.51■□□□□ 0.39
UBE3B-210ENST00000539599 ATP10DQ9P241 1426 aa17.51■□□□□ 0.39
UBE3B-210ENST00000539599 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
UBE3B-210ENST00000539599 NGDNQ8NEJ9 315 aaKnown RBP17.51■□□□□ 0.39
UBE3B-210ENST00000539599 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
UBE3B-210ENST00000539599 DCTPP1Q9H773 170 aa17.51■□□□□ 0.39
UBE3B-210ENST00000539599 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
UBE3B-210ENST00000539599 UBR1Q8IWV7 1749 aa17.5■□□□□ 0.39
UBE3B-210ENST00000539599 XRCC6P12956 609 aaKnown RBP eCLIP17.5■□□□□ 0.39
UBE3B-210ENST00000539599 HDGFP51858 240 aaKnown RBP17.5■□□□□ 0.39
UBE3B-210ENST00000539599 INTS3Q68E01 1043 aaKnown RBP17.5■□□□□ 0.39
UBE3B-210ENST00000539599 USHBP1Q8N6Y0 703 aa17.5■□□□□ 0.39
UBE3B-210ENST00000539599 EYA1Q99502 592 aa17.5■□□□□ 0.39
UBE3B-210ENST00000539599 DDIT3P35638 169 aa17.49■□□□□ 0.39
UBE3B-210ENST00000539599 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 CDC45O75419 566 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 AMPHP49418 695 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 ANKRD44Q8N8A2 993 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 PLEKHG3A1L390 1219 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 TTC22Q5TAA0 569 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 CRB1P82279 1406 aa17.48■□□□□ 0.39
UBE3B-210ENST00000539599 AK9Q5TCS8 1911 aa17.47■□□□□ 0.39
UBE3B-210ENST00000539599 CEP170BQ9Y4F5 1589 aaPredicted RBP17.47■□□□□ 0.39
UBE3B-210ENST00000539599 SSFA2P28290 1259 aa17.47■□□□□ 0.39
UBE3B-210ENST00000539599 C14orf37Q86TY3 774 aa17.47■□□□□ 0.39
UBE3B-210ENST00000539599 EXOC6BQ9Y2D4 811 aa17.47■□□□□ 0.39
UBE3B-210ENST00000539599 NCOA3Q9Y6Q9 1424 aa17.47■□□□□ 0.39
UBE3B-210ENST00000539599 NRKQ7Z2Y5 1582 aa17.47■□□□□ 0.39
UBE3B-210ENST00000539599 RGPD8O14715 1765 aaPredicted RBP17.47■□□□□ 0.39
UBE3B-210ENST00000539599 SDSP20132 328 aa17.46■□□□□ 0.39
UBE3B-210ENST00000539599 SIRT1Q96EB6 747 aa17.46■□□□□ 0.39
UBE3B-210ENST00000539599 SNX21Q969T3 373 aa17.46■□□□□ 0.39
UBE3B-210ENST00000539599 NLRP6P59044 892 aa17.45■□□□□ 0.38
UBE3B-210ENST00000539599 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
UBE3B-210ENST00000539599 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
UBE3B-210ENST00000539599 CHAMP1Q96JM3 812 aa17.45■□□□□ 0.38
UBE3B-210ENST00000539599 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
UBE3B-210ENST00000539599 GOLGA6L3A6NEY3 463 aa17.45■□□□□ 0.38
UBE3B-210ENST00000539599 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-210ENST00000539599 RRAGDQ9NQL2 400 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-210ENST00000539599 PKP1Q13835 747 aa17.44■□□□□ 0.38
UBE3B-210ENST00000539599 PLEKHG1Q9ULL1 1385 aa17.43■□□□□ 0.38
UBE3B-210ENST00000539599 GAS2L3Q86XJ1 694 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 EID1Q9Y6B2 187 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 TOPAZ1Q8N9V7 1692 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 USP31Q70CQ4 1352 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 PNMA6EA0A0J9YXQ4 647 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 KCNA6P17658 529 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 RAB3GAP1Q15042 981 aa17.41■□□□□ 0.38
UBE3B-210ENST00000539599 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
UBE3B-210ENST00000539599 FKBP5Q13451 457 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-210ENST00000539599 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
UBE3B-210ENST00000539599 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
UBE3B-210ENST00000539599 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-210ENST00000539599 FLT4P35916 1363 aa17.39■□□□□ 0.37
UBE3B-210ENST00000539599 KIAA0232Q92628 1395 aa17.39■□□□□ 0.37
UBE3B-210ENST00000539599 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
UBE3B-210ENST00000539599 FOXD4L5Q5VV16 416 aaPredicted RBP17.39■□□□□ 0.37
UBE3B-210ENST00000539599 IL17REQ8NFR9 667 aa17.39■□□□□ 0.37
UBE3B-210ENST00000539599 FOXD4L4Q8WXT5 416 aaPredicted RBP17.39■□□□□ 0.37
UBE3B-210ENST00000539599 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
UBE3B-210ENST00000539599 PTPRCP08575 1304 aa17.38■□□□□ 0.37
UBE3B-210ENST00000539599 NOL8Q76FK4 1167 aaKnown RBP17.38■□□□□ 0.37
UBE3B-210ENST00000539599 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
UBE3B-210ENST00000539599 ABTB2Q8N961 1025 aa17.38■□□□□ 0.37
UBE3B-210ENST00000539599 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
UBE3B-210ENST00000539599 FLIIQ13045 1269 aa17.37■□□□□ 0.37
UBE3B-210ENST00000539599 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
UBE3B-210ENST00000539599 NALCNQ8IZF0 1738 aa17.37■□□□□ 0.37
UBE3B-210ENST00000539599 ARHGEF10O15013 1369 aa17.37■□□□□ 0.37
UBE3B-210ENST00000539599 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
UBE3B-210ENST00000539599 HOXC9P31274 260 aa17.37■□□□□ 0.37
UBE3B-210ENST00000539599 IGSF1Q8N6C5 1336 aa17.37■□□□□ 0.37
UBE3B-210ENST00000539599 ANXA1P04083 346 aa17.36■□□□□ 0.37
UBE3B-210ENST00000539599 PIK3C2AO00443 1686 aa17.35■□□□□ 0.37
UBE3B-210ENST00000539599 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-210ENST00000539599 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
UBE3B-210ENST00000539599 PDE1AP54750 535 aa17.35■□□□□ 0.37
UBE3B-210ENST00000539599 STK31Q9BXU1 1019 aa17.35■□□□□ 0.37
UBE3B-210ENST00000539599 IL1RAPL2Q9NP60 686 aa17.35■□□□□ 0.37
UBE3B-210ENST00000539599 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
UBE3B-210ENST00000539599 KIF24Q5T7B8 1368 aa17.35■□□□□ 0.37
UBE3B-210ENST00000539599 DIP2AQ14689 1571 aa17.35■□□□□ 0.37
UBE3B-210ENST00000539599 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
UBE3B-210ENST00000539599 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
UBE3B-210ENST00000539599 FMN2Q9NZ56 1722 aa17.34■□□□□ 0.37
UBE3B-210ENST00000539599 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
UBE3B-210ENST00000539599 FAM43AQ8N2R8 423 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms