RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ATF7IPQ6VMQ6 1270 aa18.45■□□□□ 0.54
CDCA3-207ENST00000538862 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
CDCA3-207ENST00000538862 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
CDCA3-207ENST00000538862 BCL9LQ86UU0 1499 aa18.44■□□□□ 0.54
CDCA3-207ENST00000538862 GSE1Q14687 1217 aa18.43■□□□□ 0.54
CDCA3-207ENST00000538862 USP6P35125 1406 aa18.43■□□□□ 0.54
CDCA3-207ENST00000538862 PLCH1Q4KWH8 1693 aa18.43■□□□□ 0.54
CDCA3-207ENST00000538862 AKAP12Q02952 1782 aa18.43■□□□□ 0.54
CDCA3-207ENST00000538862 ABTB2Q8N961 1025 aa18.43■□□□□ 0.54
CDCA3-207ENST00000538862 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
CDCA3-207ENST00000538862 ALDH1L2Q3SY69 923 aa18.42■□□□□ 0.54
CDCA3-207ENST00000538862 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
CDCA3-207ENST00000538862 PHRF1Q9P1Y6 1649 aaKnown RBP18.42■□□□□ 0.54
CDCA3-207ENST00000538862 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
CDCA3-207ENST00000538862 ZNF428Q96B54 188 aa18.41■□□□□ 0.54
CDCA3-207ENST00000538862 SLIT2O94813 1529 aa18.41■□□□□ 0.54
CDCA3-207ENST00000538862 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
CDCA3-207ENST00000538862 TBC1D32Q96NH3 1257 aa18.4■□□□□ 0.54
CDCA3-207ENST00000538862 TRPC5Q9UL62 973 aaPredicted RBP18.4■□□□□ 0.54
CDCA3-207ENST00000538862 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
CDCA3-207ENST00000538862 ATRNO75882 1429 aa18.39■□□□□ 0.54
CDCA3-207ENST00000538862 RBM6P78332 1123 aaKnown RBP18.39■□□□□ 0.53
CDCA3-207ENST00000538862 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
CDCA3-207ENST00000538862 RSPH6AQ9H0K4 717 aa18.39■□□□□ 0.53
CDCA3-207ENST00000538862 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.38■□□□□ 0.53
CDCA3-207ENST00000538862 UNC5CLQ8IV45 518 aa18.38■□□□□ 0.53
CDCA3-207ENST00000538862 ITPRIPQ8IWB1 547 aa18.38■□□□□ 0.53
CDCA3-207ENST00000538862 MAP2P11137 1827 aaKnown RBP18.38■□□□□ 0.53
CDCA3-207ENST00000538862 PIK3C2AO00443 1686 aa18.38■□□□□ 0.53
CDCA3-207ENST00000538862 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
CDCA3-207ENST00000538862 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
CDCA3-207ENST00000538862 RGS12O14924 1447 aa18.37■□□□□ 0.53
CDCA3-207ENST00000538862 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
CDCA3-207ENST00000538862 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
CDCA3-207ENST00000538862 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
CDCA3-207ENST00000538862 NRKQ7Z2Y5 1582 aa18.36■□□□□ 0.53
CDCA3-207ENST00000538862 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
CDCA3-207ENST00000538862 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
CDCA3-207ENST00000538862 NWD2Q9ULI1 1742 aa18.36■□□□□ 0.53
CDCA3-207ENST00000538862 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
CDCA3-207ENST00000538862 CHRNA2Q15822 529 aa18.36■□□□□ 0.53
CDCA3-207ENST00000538862 EDC4Q6P2E9 1401 aaKnown RBP18.36■□□□□ 0.53
CDCA3-207ENST00000538862 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
CDCA3-207ENST00000538862 COL14A1Q05707 1796 aaKnown RBP18.36■□□□□ 0.53
CDCA3-207ENST00000538862 FRAT2O75474 233 aaPredicted RBP18.35■□□□□ 0.53
CDCA3-207ENST00000538862 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
CDCA3-207ENST00000538862 NLRP6P59044 892 aa18.35■□□□□ 0.53
CDCA3-207ENST00000538862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDCA3-207ENST00000538862 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
CDCA3-207ENST00000538862 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
CDCA3-207ENST00000538862 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
CDCA3-207ENST00000538862 BTG4Q9NY30 223 aa18.35■□□□□ 0.53
CDCA3-207ENST00000538862 NRAPQ86VF7 1730 aa18.34■□□□□ 0.53
CDCA3-207ENST00000538862 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
CDCA3-207ENST00000538862 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.53
CDCA3-207ENST00000538862 AATKQ6ZMQ8 1374 aa18.33■□□□□ 0.53
CDCA3-207ENST00000538862 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.53
CDCA3-207ENST00000538862 GLI3P10071 1580 aa18.33■□□□□ 0.53
CDCA3-207ENST00000538862 CHMP4BQ9H444 224 aaKnown RBP18.33■□□□□ 0.52
CDCA3-207ENST00000538862 CCDC9Q9Y3X0 531 aaKnown RBP18.33■□□□□ 0.52
CDCA3-207ENST00000538862 GCP02774 474 aa18.32■□□□□ 0.52
CDCA3-207ENST00000538862 ZBTB7CA1YPR0 619 aa18.31■□□□□ 0.52
CDCA3-207ENST00000538862 ARHGAP45Q92619 1136 aa18.31■□□□□ 0.52
CDCA3-207ENST00000538862 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
CDCA3-207ENST00000538862 SOX12O15370 315 aa18.31■□□□□ 0.52
CDCA3-207ENST00000538862 IL13P35225 146 aa18.31■□□□□ 0.52
CDCA3-207ENST00000538862 GNAI1P63096 354 aa18.3■□□□□ 0.52
CDCA3-207ENST00000538862 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
CDCA3-207ENST00000538862 IFT57Q9NWB7 429 aa18.3■□□□□ 0.52
CDCA3-207ENST00000538862 VPS72Q15906 364 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 VAMP4O75379 141 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 FBLN1P23142 703 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 NME9Q86XW9 330 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 TTC21AQ8NDW8 1320 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 SLIT3O75094 1523 aa18.29■□□□□ 0.52
CDCA3-207ENST00000538862 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
CDCA3-207ENST00000538862 NUCB1Q02818 461 aa18.28■□□□□ 0.52
CDCA3-207ENST00000538862 STRN4Q9NRL3 753 aa18.28■□□□□ 0.52
CDCA3-207ENST00000538862 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
CDCA3-207ENST00000538862 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
CDCA3-207ENST00000538862 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.52
CDCA3-207ENST00000538862 EP400Q96L91 3159 aa18.27■□□□□ 0.51
CDCA3-207ENST00000538862 HMOX1P09601 288 aa18.27■□□□□ 0.51
CDCA3-207ENST00000538862 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.51
CDCA3-207ENST00000538862 CAMTA1Q9Y6Y1 1673 aa18.26■□□□□ 0.51
CDCA3-207ENST00000538862 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
CDCA3-207ENST00000538862 CPDO75976 1380 aa18.26■□□□□ 0.51
CDCA3-207ENST00000538862 BRWD3Q6RI45 1802 aa18.25■□□□□ 0.51
CDCA3-207ENST00000538862 ZBTB7BO15156 539 aaPredicted RBP18.25■□□□□ 0.51
CDCA3-207ENST00000538862 COG3Q96JB2 828 aa18.25■□□□□ 0.51
CDCA3-207ENST00000538862 LMO7Q8WWI1 1683 aa18.25■□□□□ 0.51
CDCA3-207ENST00000538862 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
CDCA3-207ENST00000538862 CHD1LQ86WJ1 897 aa18.23■□□□□ 0.51
CDCA3-207ENST00000538862 GCC1Q96CN9 775 aa18.23■□□□□ 0.51
CDCA3-207ENST00000538862 CFAP44Q96MT7 982 aa18.23■□□□□ 0.51
CDCA3-207ENST00000538862 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
CDCA3-207ENST00000538862 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
CDCA3-207ENST00000538862 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms