RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
ACTN1-205ENST00000538545 CHRNA2Q15822 529 aa18.05■□□□□ 0.48
ACTN1-205ENST00000538545 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
ACTN1-205ENST00000538545 CRB1P82279 1406 aa18.05■□□□□ 0.48
ACTN1-205ENST00000538545 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
ACTN1-205ENST00000538545 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
ACTN1-205ENST00000538545 TRPM3Q9HCF6 1732 aaPredicted RBP18.04■□□□□ 0.48
ACTN1-205ENST00000538545 PDE4AP27815 886 aa18.04■□□□□ 0.48
ACTN1-205ENST00000538545 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
ACTN1-205ENST00000538545 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
ACTN1-205ENST00000538545 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
ACTN1-205ENST00000538545 RGPD5Q99666 1765 aa18.03■□□□□ 0.48
ACTN1-205ENST00000538545 CADPS2Q86UW7 1296 aa18.03■□□□□ 0.48
ACTN1-205ENST00000538545 ANKRD24Q8TF21 1146 aa18.03■□□□□ 0.48
ACTN1-205ENST00000538545 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
ACTN1-205ENST00000538545 XIRP1Q702N8 1843 aaKnown RBP18.03■□□□□ 0.48
ACTN1-205ENST00000538545 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
ACTN1-205ENST00000538545 MSH6P52701 1360 aa18.03■□□□□ 0.48
ACTN1-205ENST00000538545 KIF16BQ96L93 1317 aa18.02■□□□□ 0.48
ACTN1-205ENST00000538545 GNAT3A8MTJ3 354 aa18.02■□□□□ 0.48
ACTN1-205ENST00000538545 MSH5O43196 834 aa18.02■□□□□ 0.48
ACTN1-205ENST00000538545 BRINP3Q76B58 766 aa18■□□□□ 0.47
ACTN1-205ENST00000538545 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
ACTN1-205ENST00000538545 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
ACTN1-205ENST00000538545 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
ACTN1-205ENST00000538545 USP19O94966 1318 aa17.99■□□□□ 0.47
ACTN1-205ENST00000538545 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
ACTN1-205ENST00000538545 KIF24Q5T7B8 1368 aa17.99■□□□□ 0.47
ACTN1-205ENST00000538545 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
ACTN1-205ENST00000538545 G2E3Q7L622 706 aa17.98■□□□□ 0.47
ACTN1-205ENST00000538545 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
ACTN1-205ENST00000538545 BACH2Q9BYV9 841 aa17.97■□□□□ 0.47
ACTN1-205ENST00000538545 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
ACTN1-205ENST00000538545 KCNQ3O43525 872 aa17.97■□□□□ 0.47
ACTN1-205ENST00000538545 NPHP3Q7Z494 1330 aa17.97■□□□□ 0.47
ACTN1-205ENST00000538545 SLIT3O75094 1523 aa17.97■□□□□ 0.47
ACTN1-205ENST00000538545 SLC4A2P04920 1241 aa17.96■□□□□ 0.47
ACTN1-205ENST00000538545 ZNF530Q6P9A1 599 aaPredicted RBP17.96■□□□□ 0.47
ACTN1-205ENST00000538545 ZBTB40Q9NUA8 1239 aa17.96■□□□□ 0.47
ACTN1-205ENST00000538545 NLRP2Q9NX02 1062 aa17.96■□□□□ 0.47
ACTN1-205ENST00000538545 PDZRN3Q9UPQ7 1066 aa17.96■□□□□ 0.47
ACTN1-205ENST00000538545 KIF1AQ12756 1690 aa17.96■□□□□ 0.47
ACTN1-205ENST00000538545 ALS2Q96Q42 1657 aa17.95■□□□□ 0.46
ACTN1-205ENST00000538545 PXDNQ92626 1479 aa17.95■□□□□ 0.46
ACTN1-205ENST00000538545 F6X3S4 739 aa17.95■□□□□ 0.46
ACTN1-205ENST00000538545 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
ACTN1-205ENST00000538545 ERBB3P21860 1342 aa17.94■□□□□ 0.46
ACTN1-205ENST00000538545 MS4A1P11836 297 aa17.94■□□□□ 0.46
ACTN1-205ENST00000538545 ZNF428Q96B54 188 aa17.94■□□□□ 0.46
ACTN1-205ENST00000538545 ZBTB7BO15156 539 aaPredicted RBP17.93■□□□□ 0.46
ACTN1-205ENST00000538545 CSB-PGBD3P0DP91 1061 aa17.93■□□□□ 0.46
ACTN1-205ENST00000538545 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
ACTN1-205ENST00000538545 SPATA31A3Q5VYP0 1347 aa17.92■□□□□ 0.46
ACTN1-205ENST00000538545 DCCP43146 1447 aa17.92■□□□□ 0.46
ACTN1-205ENST00000538545 KIAA0232Q92628 1395 aa17.92■□□□□ 0.46
ACTN1-205ENST00000538545 RWDD1Q9H446 243 aaPredicted RBP17.92■□□□□ 0.46
ACTN1-205ENST00000538545 TAF7Q15545 349 aaPredicted RBP17.91■□□□□ 0.46
ACTN1-205ENST00000538545 SLC4A10Q6U841 1118 aa17.91■□□□□ 0.46
ACTN1-205ENST00000538545 ABCC4O15439 1325 aa17.91■□□□□ 0.46
ACTN1-205ENST00000538545 TNS3Q68CZ2 1445 aa17.91■□□□□ 0.46
ACTN1-205ENST00000538545 C8orf34Q49A92 452 aa17.9■□□□□ 0.46
ACTN1-205ENST00000538545 EIF2S2P20042 333 aaKnown RBP17.9■□□□□ 0.46
ACTN1-205ENST00000538545 ANXA1P04083 346 aa17.9■□□□□ 0.46
ACTN1-205ENST00000538545 ARHGAP45Q92619 1136 aa17.89■□□□□ 0.45
ACTN1-205ENST00000538545 RGS12O14924 1447 aa17.89■□□□□ 0.45
ACTN1-205ENST00000538545 PLEKHO1Q53GL0 409 aaPredicted RBP17.89■□□□□ 0.45
ACTN1-205ENST00000538545 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
ACTN1-205ENST00000538545 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
ACTN1-205ENST00000538545 NCOA3Q9Y6Q9 1424 aa17.87■□□□□ 0.45
ACTN1-205ENST00000538545 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
ACTN1-205ENST00000538545 API5Q9BZZ5 524 aaKnown RBP17.87■□□□□ 0.45
ACTN1-205ENST00000538545 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
ACTN1-205ENST00000538545 TEFQ10587 303 aa17.87■□□□□ 0.45
ACTN1-205ENST00000538545 HAP1P54257 671 aaPredicted RBP17.86■□□□□ 0.45
ACTN1-205ENST00000538545 C1orf141Q5JVX7 400 aa17.86■□□□□ 0.45
ACTN1-205ENST00000538545 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
ACTN1-205ENST00000538545 PHAXQ9H814 394 aaKnown RBP17.86■□□□□ 0.45
ACTN1-205ENST00000538545 LRRC37A3O60309 1634 aa17.86■□□□□ 0.45
ACTN1-205ENST00000538545 SEC24BO95487 1268 aa17.85■□□□□ 0.45
ACTN1-205ENST00000538545 MEIS3Q99687 375 aa17.85■□□□□ 0.45
ACTN1-205ENST00000538545 LNPKQ9C0E8 428 aa17.85■□□□□ 0.45
ACTN1-205ENST00000538545 CEMIPQ8WUJ3 1361 aa17.85■□□□□ 0.45
ACTN1-205ENST00000538545 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
ACTN1-205ENST00000538545 RNMTO43148 476 aaKnown RBP17.85■□□□□ 0.45
ACTN1-205ENST00000538545 SLC39A6Q13433 755 aa17.85■□□□□ 0.45
ACTN1-205ENST00000538545 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
ACTN1-205ENST00000538545 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
ACTN1-205ENST00000538545 RAPGEF4Q8WZA2 1011 aa17.84■□□□□ 0.45
ACTN1-205ENST00000538545 FKBP5Q13451 457 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-205ENST00000538545 HDAC1Q13547 482 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-205ENST00000538545 AAMPQ13685 434 aa17.84■□□□□ 0.45
ACTN1-205ENST00000538545 MEGF6O75095 1541 aa17.83■□□□□ 0.45
ACTN1-205ENST00000538545 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.45
ACTN1-205ENST00000538545 STK31Q9BXU1 1019 aa17.83■□□□□ 0.45
ACTN1-205ENST00000538545 EIF4A1P60842 406 aaKnown RBP17.83■□□□□ 0.44
ACTN1-205ENST00000538545 FLIIQ13045 1269 aa17.83■□□□□ 0.44
ACTN1-205ENST00000538545 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
ACTN1-205ENST00000538545 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
ACTN1-205ENST00000538545 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
ACTN1-205ENST00000538545 ANP32AP39687 249 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms