RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 HAP1P54257 671 aaPredicted RBP17.7■□□□□ 0.42
LIMK1-208ENST00000538333 ADGRL3Q9HAR2 1447 aa17.69■□□□□ 0.42
LIMK1-208ENST00000538333 LTN1O94822 1766 aa17.69■□□□□ 0.42
LIMK1-208ENST00000538333 ABTB2Q8N961 1025 aa17.69■□□□□ 0.42
LIMK1-208ENST00000538333 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
LIMK1-208ENST00000538333 NUTM2GQ5VZR2 741 aa17.68■□□□□ 0.42
LIMK1-208ENST00000538333 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
LIMK1-208ENST00000538333 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
LIMK1-208ENST00000538333 TBC1D32Q96NH3 1257 aa17.67■□□□□ 0.42
LIMK1-208ENST00000538333 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
LIMK1-208ENST00000538333 INTS3Q68E01 1043 aaKnown RBP17.66■□□□□ 0.42
LIMK1-208ENST00000538333 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
LIMK1-208ENST00000538333 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
LIMK1-208ENST00000538333 NFAT5O94916 1531 aa17.66■□□□□ 0.42
LIMK1-208ENST00000538333 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
LIMK1-208ENST00000538333 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
LIMK1-208ENST00000538333 RTF1Q92541 710 aaKnown RBP17.65■□□□□ 0.42
LIMK1-208ENST00000538333 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
LIMK1-208ENST00000538333 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.42
LIMK1-208ENST00000538333 LNPKQ9C0E8 428 aa17.64■□□□□ 0.42
LIMK1-208ENST00000538333 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.42
LIMK1-208ENST00000538333 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
LIMK1-208ENST00000538333 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
LIMK1-208ENST00000538333 USP35Q9P2H5 1018 aa17.64■□□□□ 0.41
LIMK1-208ENST00000538333 PTPRCP08575 1304 aa17.63■□□□□ 0.41
LIMK1-208ENST00000538333 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
LIMK1-208ENST00000538333 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
LIMK1-208ENST00000538333 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
LIMK1-208ENST00000538333 ATP10DQ9P241 1426 aa17.61■□□□□ 0.41
LIMK1-208ENST00000538333 MSH6P52701 1360 aa17.6■□□□□ 0.41
LIMK1-208ENST00000538333 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
LIMK1-208ENST00000538333 ANKRD45Q5TZF3 282 aa17.6■□□□□ 0.41
LIMK1-208ENST00000538333 FAM208AQ9UK61 1670 aaKnown RBP17.59■□□□□ 0.41
LIMK1-208ENST00000538333 DEKP35659 375 aaKnown RBP17.59■□□□□ 0.41
LIMK1-208ENST00000538333 IP6K1Q92551 441 aa17.59■□□□□ 0.41
LIMK1-208ENST00000538333 MAP3K5Q99683 1374 aa17.59■□□□□ 0.41
LIMK1-208ENST00000538333 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
LIMK1-208ENST00000538333 ESCO1Q5FWF5 840 aa17.59■□□□□ 0.41
LIMK1-208ENST00000538333 C14orf37Q86TY3 774 aa17.59■□□□□ 0.41
LIMK1-208ENST00000538333 CACNA1FO60840 1977 aa17.58■□□□□ 0.4
LIMK1-208ENST00000538333 BMP2KLQ5H9B9 411 aa17.57■□□□□ 0.4
LIMK1-208ENST00000538333 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
LIMK1-208ENST00000538333 PSME1Q06323 249 aa17.57■□□□□ 0.4
LIMK1-208ENST00000538333 BECN1Q14457 450 aa17.57■□□□□ 0.4
LIMK1-208ENST00000538333 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
LIMK1-208ENST00000538333 RGPD2P0DJD1 1756 aa17.57■□□□□ 0.4
LIMK1-208ENST00000538333 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
LIMK1-208ENST00000538333 DCTPP1Q9H773 170 aa17.56■□□□□ 0.4
LIMK1-208ENST00000538333 NFKBIBQ15653 356 aa17.56■□□□□ 0.4
LIMK1-208ENST00000538333 G2E3Q7L622 706 aa17.56■□□□□ 0.4
LIMK1-208ENST00000538333 MFAP1P55081 439 aaKnown RBP17.55■□□□□ 0.4
LIMK1-208ENST00000538333 C22orf23Q9BZE7 217 aa17.55■□□□□ 0.4
LIMK1-208ENST00000538333 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
LIMK1-208ENST00000538333 SLIT3O75094 1523 aa17.55■□□□□ 0.4
LIMK1-208ENST00000538333 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
LIMK1-208ENST00000538333 USHBP1Q8N6Y0 703 aa17.55■□□□□ 0.4
LIMK1-208ENST00000538333 KCNH5Q8NCM2 988 aa17.55■□□□□ 0.4
LIMK1-208ENST00000538333 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
LIMK1-208ENST00000538333 CEP85Q6P2H3 762 aa17.54■□□□□ 0.4
LIMK1-208ENST00000538333 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
LIMK1-208ENST00000538333 MEIS3Q99687 375 aa17.54■□□□□ 0.4
LIMK1-208ENST00000538333 ORAI2Q96SN7 254 aa17.53■□□□□ 0.4
LIMK1-208ENST00000538333 SOS1Q07889 1333 aaPredicted RBP17.53■□□□□ 0.4
LIMK1-208ENST00000538333 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
LIMK1-208ENST00000538333 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
LIMK1-208ENST00000538333 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
LIMK1-208ENST00000538333 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
LIMK1-208ENST00000538333 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
LIMK1-208ENST00000538333 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
LIMK1-208ENST00000538333 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
LIMK1-208ENST00000538333 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
LIMK1-208ENST00000538333 F6X3S4 739 aa17.5■□□□□ 0.39
LIMK1-208ENST00000538333 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
LIMK1-208ENST00000538333 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
LIMK1-208ENST00000538333 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
LIMK1-208ENST00000538333 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
LIMK1-208ENST00000538333 KDM3BQ7LBC6 1761 aa17.5■□□□□ 0.39
LIMK1-208ENST00000538333 GCP02774 474 aa17.49■□□□□ 0.39
LIMK1-208ENST00000538333 RBM25P49756 843 aaKnown RBP17.49■□□□□ 0.39
LIMK1-208ENST00000538333 ARHGEF25Q86VW2 580 aa17.49■□□□□ 0.39
LIMK1-208ENST00000538333 PLEKHM2Q8IWE5 1019 aa17.49■□□□□ 0.39
LIMK1-208ENST00000538333 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
LIMK1-208ENST00000538333 CAMTA1Q9Y6Y1 1673 aa17.49■□□□□ 0.39
LIMK1-208ENST00000538333 FLIIQ13045 1269 aa17.49■□□□□ 0.39
LIMK1-208ENST00000538333 C1orf167Q5SNV9 1468 aa17.48■□□□□ 0.39
LIMK1-208ENST00000538333 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
LIMK1-208ENST00000538333 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
LIMK1-208ENST00000538333 MST1RQ04912 1400 aa17.47■□□□□ 0.39
LIMK1-208ENST00000538333 GSPT1P15170 499 aaKnown RBP17.47■□□□□ 0.39
LIMK1-208ENST00000538333 TBC1D9Q6ZT07 1266 aa17.46■□□□□ 0.39
LIMK1-208ENST00000538333 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
LIMK1-208ENST00000538333 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.39
LIMK1-208ENST00000538333 ALS2Q96Q42 1657 aa17.46■□□□□ 0.39
LIMK1-208ENST00000538333 PXDNLA1KZ92 1463 aa17.46■□□□□ 0.39
LIMK1-208ENST00000538333 FRAT2O75474 233 aaPredicted RBP17.45■□□□□ 0.38
LIMK1-208ENST00000538333 FKBP5Q13451 457 aaPredicted RBP17.45■□□□□ 0.38
LIMK1-208ENST00000538333 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
LIMK1-208ENST00000538333 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
LIMK1-208ENST00000538333 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
LIMK1-208ENST00000538333 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms