RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 FRAT1Q92837 279 aaPredicted RBP11.85□□□□□ -0.51
DDB1-211ENST00000538280 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
DDB1-211ENST00000538280 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
DDB1-211ENST00000538280 PEAK1Q9H792 1746 aa11.85□□□□□ -0.51
DDB1-211ENST00000538280 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 SEPT12Q8IYM1 358 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 ZNF428Q96B54 188 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 USP6P35125 1406 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 THSD7AQ9UPZ6 1657 aa11.84□□□□□ -0.51
DDB1-211ENST00000538280 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
DDB1-211ENST00000538280 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
DDB1-211ENST00000538280 DZIP1LQ8IYY4 767 aaKnown RBP11.83□□□□□ -0.52
DDB1-211ENST00000538280 SSH1Q8WYL5 1049 aa11.83□□□□□ -0.52
DDB1-211ENST00000538280 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
DDB1-211ENST00000538280 EMILIN1Q9Y6C2 1016 aa11.83□□□□□ -0.52
DDB1-211ENST00000538280 COL14A1Q05707 1796 aaKnown RBP11.82□□□□□ -0.52
DDB1-211ENST00000538280 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
DDB1-211ENST00000538280 ZNF853P0CG23 659 aa11.82□□□□□ -0.52
DDB1-211ENST00000538280 NPM2Q86SE8 214 aaKnown RBP11.82□□□□□ -0.52
DDB1-211ENST00000538280 COG3Q96JB2 828 aa11.82□□□□□ -0.52
DDB1-211ENST00000538280 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
DDB1-211ENST00000538280 KIF16BQ96L93 1317 aa11.82□□□□□ -0.52
DDB1-211ENST00000538280 PHRF1Q9P1Y6 1649 aaKnown RBP11.82□□□□□ -0.52
DDB1-211ENST00000538280 TRIM27P14373 513 aa11.81□□□□□ -0.52
DDB1-211ENST00000538280 FBLN1P23142 703 aa11.81□□□□□ -0.52
DDB1-211ENST00000538280 RGS3P49796 1198 aa11.81□□□□□ -0.52
DDB1-211ENST00000538280 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
DDB1-211ENST00000538280 VPS72Q15906 364 aa11.81□□□□□ -0.52
DDB1-211ENST00000538280 SMC4Q9NTJ3 1288 aa11.81□□□□□ -0.52
DDB1-211ENST00000538280 HDAC1Q13547 482 aaPredicted RBP11.8□□□□□ -0.52
DDB1-211ENST00000538280 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
DDB1-211ENST00000538280 PHACTR3Q96KR7 559 aa11.8□□□□□ -0.52
DDB1-211ENST00000538280 RWDD1Q9H446 243 aaPredicted RBP11.8□□□□□ -0.52
DDB1-211ENST00000538280 IFT57Q9NWB7 429 aa11.8□□□□□ -0.52
DDB1-211ENST00000538280 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
DDB1-211ENST00000538280 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
DDB1-211ENST00000538280 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 FAM83GA6ND36 823 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 NEFMP07197 916 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 LMOD3Q0VAK6 560 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 FAM182BQ5T319 152 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 USP19O94966 1318 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 ACEP12821 1306 aa11.79□□□□□ -0.52
DDB1-211ENST00000538280 ANKARQ7Z5J8 1434 aa11.78□□□□□ -0.52
DDB1-211ENST00000538280 GNAI1P63096 354 aa11.78□□□□□ -0.52
DDB1-211ENST00000538280 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
DDB1-211ENST00000538280 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
DDB1-211ENST00000538280 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
DDB1-211ENST00000538280 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
DDB1-211ENST00000538280 RREB1Q92766 1687 aa11.78□□□□□ -0.52
DDB1-211ENST00000538280 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
DDB1-211ENST00000538280 IPO8O15397 1037 aaKnown RBP11.77□□□□□ -0.53
DDB1-211ENST00000538280 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
DDB1-211ENST00000538280 HMOX1P09601 288 aa11.77□□□□□ -0.53
DDB1-211ENST00000538280 HAP1P54257 671 aaPredicted RBP11.77□□□□□ -0.53
DDB1-211ENST00000538280 FAM98CQ17RN3 349 aaKnown RBP11.77□□□□□ -0.53
DDB1-211ENST00000538280 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.53
DDB1-211ENST00000538280 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
DDB1-211ENST00000538280 ARHGAP45Q92619 1136 aa11.77□□□□□ -0.53
DDB1-211ENST00000538280 NOB1Q9ULX3 412 aaKnown RBP11.77□□□□□ -0.53
DDB1-211ENST00000538280 ARHGEF10O15013 1369 aa11.77□□□□□ -0.53
DDB1-211ENST00000538280 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
DDB1-211ENST00000538280 VAMP4O75379 141 aa11.76□□□□□ -0.53
DDB1-211ENST00000538280 SMC5Q8IY18 1101 aa11.76□□□□□ -0.53
DDB1-211ENST00000538280 TMEM57Q8N5G2 664 aa11.76□□□□□ -0.53
DDB1-211ENST00000538280 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
DDB1-211ENST00000538280 ZBTB40Q9NUA8 1239 aa11.76□□□□□ -0.53
DDB1-211ENST00000538280 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
DDB1-211ENST00000538280 A0A0G2JS52 829 aa11.75□□□□□ -0.53
DDB1-211ENST00000538280 EIF4A2Q14240 407 aaKnown RBP11.75□□□□□ -0.53
DDB1-211ENST00000538280 RRS1Q15050 365 aaKnown RBP11.75□□□□□ -0.53
DDB1-211ENST00000538280 CFAP44Q96MT7 982 aa11.75□□□□□ -0.53
DDB1-211ENST00000538280 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
DDB1-211ENST00000538280 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
DDB1-211ENST00000538280 MBIPQ9NS73 344 aa11.74□□□□□ -0.53
DDB1-211ENST00000538280 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
DDB1-211ENST00000538280 ABCC4O15439 1325 aa11.74□□□□□ -0.53
DDB1-211ENST00000538280 KIF24Q5T7B8 1368 aa11.74□□□□□ -0.53
DDB1-211ENST00000538280 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
DDB1-211ENST00000538280 KDRP35968 1356 aa11.72□□□□□ -0.53
DDB1-211ENST00000538280 KIAA0232Q92628 1395 aa11.72□□□□□ -0.53
DDB1-211ENST00000538280 PSME1Q06323 249 aa11.72□□□□□ -0.53
DDB1-211ENST00000538280 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
DDB1-211ENST00000538280 THUMPD2Q9BTF0 503 aaKnown RBP11.72□□□□□ -0.53
DDB1-211ENST00000538280 USP35Q9P2H5 1018 aa11.72□□□□□ -0.53
DDB1-211ENST00000538280 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.53
DDB1-211ENST00000538280 CRB1P82279 1406 aa11.71□□□□□ -0.53
DDB1-211ENST00000538280 SPATA31A5Q5VU36 1347 aa11.71□□□□□ -0.53
DDB1-211ENST00000538280 SPATA31A7Q8IWB4 1347 aa11.71□□□□□ -0.53
DDB1-211ENST00000538280 BAG6P46379 1132 aa11.71□□□□□ -0.53
DDB1-211ENST00000538280 R3HDM1Q15032 1099 aaKnown RBP11.71□□□□□ -0.53
DDB1-211ENST00000538280 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
DDB1-211ENST00000538280 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.53
DDB1-211ENST00000538280 FLT4P35916 1363 aa11.7□□□□□ -0.54
DDB1-211ENST00000538280 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
DDB1-211ENST00000538280 SEC24BO95487 1268 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms