RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 K7ELQ4 463 aaPredicted RBP17.79■□□□□ 0.44
USP44-203ENST00000537435 CEP85Q6P2H3 762 aa17.79■□□□□ 0.44
USP44-203ENST00000537435 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
USP44-203ENST00000537435 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
USP44-203ENST00000537435 FAM43AQ8N2R8 423 aa17.79■□□□□ 0.44
USP44-203ENST00000537435 TNPO1Q92973 898 aaKnown RBP17.79■□□□□ 0.44
USP44-203ENST00000537435 MSH6P52701 1360 aa17.78■□□□□ 0.44
USP44-203ENST00000537435 USP31Q70CQ4 1352 aa17.78■□□□□ 0.44
USP44-203ENST00000537435 PTPRCP08575 1304 aa17.78■□□□□ 0.44
USP44-203ENST00000537435 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
USP44-203ENST00000537435 TTC22Q5TAA0 569 aa17.78■□□□□ 0.44
USP44-203ENST00000537435 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.44
USP44-203ENST00000537435 PEAK1Q9H792 1746 aa17.77■□□□□ 0.44
USP44-203ENST00000537435 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
USP44-203ENST00000537435 CRB1P82279 1406 aa17.77■□□□□ 0.44
USP44-203ENST00000537435 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.43
USP44-203ENST00000537435 RAB3GAP1Q15042 981 aa17.77■□□□□ 0.43
USP44-203ENST00000537435 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.43
USP44-203ENST00000537435 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.43
USP44-203ENST00000537435 RTL1A6NKG5 1358 aa17.77■□□□□ 0.43
USP44-203ENST00000537435 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
USP44-203ENST00000537435 MEIS3Q99687 375 aa17.76■□□□□ 0.43
USP44-203ENST00000537435 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
USP44-203ENST00000537435 MAP3K19Q56UN5 1328 aa17.76■□□□□ 0.43
USP44-203ENST00000537435 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
USP44-203ENST00000537435 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
USP44-203ENST00000537435 FOXO3O43524 673 aa17.75■□□□□ 0.43
USP44-203ENST00000537435 SSH2Q76I76 1423 aa17.75■□□□□ 0.43
USP44-203ENST00000537435 PTPRUQ92729 1446 aa17.75■□□□□ 0.43
USP44-203ENST00000537435 RGPD1P0DJD0 1748 aa17.74■□□□□ 0.43
USP44-203ENST00000537435 EIF5BO60841 1220 aaKnown RBP17.74■□□□□ 0.43
USP44-203ENST00000537435 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
USP44-203ENST00000537435 GBP4Q96PP9 640 aa17.74■□□□□ 0.43
USP44-203ENST00000537435 ARHGEF10O15013 1369 aa17.74■□□□□ 0.43
USP44-203ENST00000537435 APBB1O00213 710 aa17.74■□□□□ 0.43
USP44-203ENST00000537435 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
USP44-203ENST00000537435 NALCNQ8IZF0 1738 aa17.74■□□□□ 0.43
USP44-203ENST00000537435 GAS2L2Q8NHY3 880 aa17.73■□□□□ 0.43
USP44-203ENST00000537435 RTF1Q92541 710 aaKnown RBP17.73■□□□□ 0.43
USP44-203ENST00000537435 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
USP44-203ENST00000537435 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
USP44-203ENST00000537435 PANK2Q9BZ23 570 aa17.72■□□□□ 0.43
USP44-203ENST00000537435 G2E3Q7L622 706 aa17.71■□□□□ 0.43
USP44-203ENST00000537435 USP26Q9BXU7 913 aa17.71■□□□□ 0.43
USP44-203ENST00000537435 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
USP44-203ENST00000537435 FLT4P35916 1363 aa17.71■□□□□ 0.43
USP44-203ENST00000537435 SDSP20132 328 aa17.71■□□□□ 0.42
USP44-203ENST00000537435 RABEP1Q15276 862 aa17.71■□□□□ 0.42
USP44-203ENST00000537435 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.42
USP44-203ENST00000537435 SBNO1A3KN83 1393 aa17.7■□□□□ 0.42
USP44-203ENST00000537435 F6X3S4 739 aa17.7■□□□□ 0.42
USP44-203ENST00000537435 CEBPAP49715 358 aaPredicted RBP17.7■□□□□ 0.42
USP44-203ENST00000537435 EID1Q9Y6B2 187 aa17.7■□□□□ 0.42
USP44-203ENST00000537435 MRE11P49959 708 aa17.7■□□□□ 0.42
USP44-203ENST00000537435 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
USP44-203ENST00000537435 AMPHP49418 695 aa17.69■□□□□ 0.42
USP44-203ENST00000537435 EYA1Q99502 592 aa17.69■□□□□ 0.42
USP44-203ENST00000537435 KIF13AQ9H1H9 1805 aa17.69■□□□□ 0.42
USP44-203ENST00000537435 HMMRO75330 724 aa17.69■□□□□ 0.42
USP44-203ENST00000537435 KDRP35968 1356 aa17.68■□□□□ 0.42
USP44-203ENST00000537435 SSFA2P28290 1259 aa17.68■□□□□ 0.42
USP44-203ENST00000537435 CASC1Q6TDU7 716 aa17.68■□□□□ 0.42
USP44-203ENST00000537435 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
USP44-203ENST00000537435 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
USP44-203ENST00000537435 RRAGDQ9NQL2 400 aaPredicted RBP17.67■□□□□ 0.42
USP44-203ENST00000537435 IGSF1Q8N6C5 1336 aa17.67■□□□□ 0.42
USP44-203ENST00000537435 PTMSP20962 102 aa17.66■□□□□ 0.42
USP44-203ENST00000537435 SKOR2Q2VWA4 1001 aaPredicted RBP17.66■□□□□ 0.42
USP44-203ENST00000537435 GRPEL1Q9HAV7 217 aa17.66■□□□□ 0.42
USP44-203ENST00000537435 RIMS1Q86UR5 1692 aaKnown RBP17.66■□□□□ 0.42
USP44-203ENST00000537435 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
USP44-203ENST00000537435 ISY1Q9ULR0 285 aaKnown RBP17.65■□□□□ 0.42
USP44-203ENST00000537435 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
USP44-203ENST00000537435 TBX22Q9Y458 520 aa17.65■□□□□ 0.42
USP44-203ENST00000537435 GNAI2P04899 355 aa17.63■□□□□ 0.41
USP44-203ENST00000537435 FMN2Q9NZ56 1722 aa17.63■□□□□ 0.41
USP44-203ENST00000537435 NLRP6P59044 892 aa17.63■□□□□ 0.41
USP44-203ENST00000537435 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
USP44-203ENST00000537435 CLEC17AQ6ZS10 378 aa17.63■□□□□ 0.41
USP44-203ENST00000537435 OSBPL3Q9H4L5 887 aa17.63■□□□□ 0.41
USP44-203ENST00000537435 GOLGA6L22H0YM25 854 aa17.62■□□□□ 0.41
USP44-203ENST00000537435 REC8O95072 547 aa17.62■□□□□ 0.41
USP44-203ENST00000537435 PDE1AP54750 535 aa17.62■□□□□ 0.41
USP44-203ENST00000537435 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
USP44-203ENST00000537435 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
USP44-203ENST00000537435 FLIIQ13045 1269 aa17.62■□□□□ 0.41
USP44-203ENST00000537435 GAS2L3Q86XJ1 694 aa17.62■□□□□ 0.41
USP44-203ENST00000537435 EXOC6BQ9Y2D4 811 aa17.62■□□□□ 0.41
USP44-203ENST00000537435 ERC2O15083 957 aa17.61■□□□□ 0.41
USP44-203ENST00000537435 BAG4O95429 457 aaKnown RBP17.61■□□□□ 0.41
USP44-203ENST00000537435 FKBP5Q13451 457 aaPredicted RBP17.61■□□□□ 0.41
USP44-203ENST00000537435 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
USP44-203ENST00000537435 CCDC30Q5VVM6 783 aa17.61■□□□□ 0.41
USP44-203ENST00000537435 NECTIN2Q92692 538 aa17.61■□□□□ 0.41
USP44-203ENST00000537435 ST18O60284 1047 aa17.6■□□□□ 0.41
USP44-203ENST00000537435 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
USP44-203ENST00000537435 SLIT1O75093 1534 aa17.6■□□□□ 0.41
USP44-203ENST00000537435 HOXC9P31274 260 aa17.6■□□□□ 0.41
USP44-203ENST00000537435 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
USP44-203ENST00000537435 PIK3C2AO00443 1686 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms