RNA–Protein interactions for RNA: ENST00000536586.5

CD9-206, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 739 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-206ENST00000536586 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
CD9-206ENST00000536586 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
CD9-206ENST00000536586 COL3A1P02461 1466 aaPredicted RBP18.71■□□□□ 0.59
CD9-206ENST00000536586 PARD3Q8TEW0 1356 aa18.7■□□□□ 0.58
CD9-206ENST00000536586 BAG6P46379 1132 aa18.7■□□□□ 0.58
CD9-206ENST00000536586 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
CD9-206ENST00000536586 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
CD9-206ENST00000536586 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
CD9-206ENST00000536586 VIRMAQ69YN4 1812 aaKnown RBP18.7■□□□□ 0.58
CD9-206ENST00000536586 PLSCR1O15162 318 aa18.69■□□□□ 0.58
CD9-206ENST00000536586 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
CD9-206ENST00000536586 IL13P35225 146 aa18.69■□□□□ 0.58
CD9-206ENST00000536586 SF3B2Q13435 895 aaKnown RBP18.69■□□□□ 0.58
CD9-206ENST00000536586 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
CD9-206ENST00000536586 KDRP35968 1356 aa18.68■□□□□ 0.58
CD9-206ENST00000536586 MTHFSP49914 203 aa18.68■□□□□ 0.58
CD9-206ENST00000536586 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
CD9-206ENST00000536586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
CD9-206ENST00000536586 LY75O60449 1722 aa18.68■□□□□ 0.58
CD9-206ENST00000536586 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
CD9-206ENST00000536586 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
CD9-206ENST00000536586 APBA3O96018 575 aa18.65■□□□□ 0.58
CD9-206ENST00000536586 TATP17735 454 aaPredicted RBP18.65■□□□□ 0.58
CD9-206ENST00000536586 CYP27B1O15528 508 aa18.64■□□□□ 0.57
CD9-206ENST00000536586 KCNQ2O43526 872 aa18.64■□□□□ 0.57
CD9-206ENST00000536586 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
CD9-206ENST00000536586 EZH2Q15910 746 aaKnown RBP18.64■□□□□ 0.57
CD9-206ENST00000536586 PROM2Q8N271 834 aa18.63■□□□□ 0.57
CD9-206ENST00000536586 SCN11AQ9UI33 1791 aa18.61■□□□□ 0.57
CD9-206ENST00000536586 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
CD9-206ENST00000536586 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
CD9-206ENST00000536586 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
CD9-206ENST00000536586 DDX54Q8TDD1 881 aaKnown RBP18.61■□□□□ 0.57
CD9-206ENST00000536586 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
CD9-206ENST00000536586 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
CD9-206ENST00000536586 PPP2R1AP30153 589 aa18.58■□□□□ 0.56
CD9-206ENST00000536586 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.56
CD9-206ENST00000536586 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
CD9-206ENST00000536586 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
CD9-206ENST00000536586 SPG7Q9UQ90 795 aa18.57■□□□□ 0.56
CD9-206ENST00000536586 DIAPH1O60610 1272 aaKnown RBP18.56■□□□□ 0.56
CD9-206ENST00000536586 PHKG2P15735 406 aa18.55■□□□□ 0.56
CD9-206ENST00000536586 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
CD9-206ENST00000536586 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
CD9-206ENST00000536586 ZNF831Q5JPB2 1677 aa18.54■□□□□ 0.56
CD9-206ENST00000536586 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
CD9-206ENST00000536586 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
CD9-206ENST00000536586 CASZ1Q86V15 1759 aa18.54■□□□□ 0.56
CD9-206ENST00000536586 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
CD9-206ENST00000536586 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
CD9-206ENST00000536586 SRCAPQ6ZRS2 3230 aa18.53■□□□□ 0.56
CD9-206ENST00000536586 IFNL2Q8IZJ0 200 aa18.53■□□□□ 0.56
CD9-206ENST00000536586 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
CD9-206ENST00000536586 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
CD9-206ENST00000536586 LRP5O75197 1615 aa18.51■□□□□ 0.55
CD9-206ENST00000536586 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
CD9-206ENST00000536586 COL24A1Q17RW2 1714 aa18.5■□□□□ 0.55
CD9-206ENST00000536586 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
CD9-206ENST00000536586 DLG5Q8TDM6 1919 aa18.49■□□□□ 0.55
CD9-206ENST00000536586 C5P01031 1676 aa18.49■□□□□ 0.55
CD9-206ENST00000536586 RALBP1Q15311 655 aa18.48■□□□□ 0.55
CD9-206ENST00000536586 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
CD9-206ENST00000536586 HMOX1P09601 288 aa18.47■□□□□ 0.55
CD9-206ENST00000536586 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
CD9-206ENST00000536586 PIGBQ92521 554 aa18.47■□□□□ 0.55
CD9-206ENST00000536586 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
CD9-206ENST00000536586 CICQ96RK0 1608 aaPredicted RBP18.47■□□□□ 0.55
CD9-206ENST00000536586 MRC1P22897 1456 aa18.46■□□□□ 0.55
CD9-206ENST00000536586 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
CD9-206ENST00000536586 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
CD9-206ENST00000536586 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
CD9-206ENST00000536586 R3HDM1Q15032 1099 aaKnown RBP18.45■□□□□ 0.54
CD9-206ENST00000536586 ZNF530Q6P9A1 599 aaPredicted RBP18.45■□□□□ 0.54
CD9-206ENST00000536586 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
CD9-206ENST00000536586 RSPH6AQ9H0K4 717 aa18.45■□□□□ 0.54
CD9-206ENST00000536586 UBR3Q6ZT12 1888 aa18.45■□□□□ 0.54
CD9-206ENST00000536586 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
CD9-206ENST00000536586 MTHFSDQ2M296 383 aaKnown RBP18.44■□□□□ 0.54
CD9-206ENST00000536586 UBR2Q8IWV8 1755 aa18.43■□□□□ 0.54
CD9-206ENST00000536586 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
CD9-206ENST00000536586 PSDA5PKW4 1024 aaPredicted RBP18.43■□□□□ 0.54
CD9-206ENST00000536586 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
CD9-206ENST00000536586 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
CD9-206ENST00000536586 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
CD9-206ENST00000536586 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
CD9-206ENST00000536586 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
CD9-206ENST00000536586 FCHSD2O94868 740 aa18.42■□□□□ 0.54
CD9-206ENST00000536586 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
CD9-206ENST00000536586 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
CD9-206ENST00000536586 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
CD9-206ENST00000536586 PALLDQ8WX93 1383 aa18.41■□□□□ 0.54
CD9-206ENST00000536586 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
CD9-206ENST00000536586 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
CD9-206ENST00000536586 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
CD9-206ENST00000536586 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
CD9-206ENST00000536586 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
CD9-206ENST00000536586 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
CD9-206ENST00000536586 TMOD3Q9NYL9 352 aa18.39■□□□□ 0.53
CD9-206ENST00000536586 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
CD9-206ENST00000536586 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms