RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 DOT1LQ8TEK3 1739 aa15.3■□□□□ 0.04
TNFRSF1A-208ENST00000536194 RAPGEF4Q8WZA2 1011 aa15.3■□□□□ 0.04
TNFRSF1A-208ENST00000536194 KDRP35968 1356 aa15.29■□□□□ 0.04
TNFRSF1A-208ENST00000536194 TATP17735 454 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-208ENST00000536194 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-208ENST00000536194 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
TNFRSF1A-208ENST00000536194 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-208ENST00000536194 TRIM37O94972 964 aa15.28■□□□□ 0.04
TNFRSF1A-208ENST00000536194 PTF1AQ7RTS3 328 aa15.27■□□□□ 0.04
TNFRSF1A-208ENST00000536194 DDX54Q8TDD1 881 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-208ENST00000536194 RALBP1Q15311 655 aa15.26■□□□□ 0.03
TNFRSF1A-208ENST00000536194 SULT6B1Q6IMI4 303 aa15.26■□□□□ 0.03
TNFRSF1A-208ENST00000536194 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
TNFRSF1A-208ENST00000536194 BTAF1O14981 1849 aa15.26■□□□□ 0.03
TNFRSF1A-208ENST00000536194 KAT6BQ8WYB5 2073 aa15.25■□□□□ 0.03
TNFRSF1A-208ENST00000536194 CYP27B1O15528 508 aa15.25■□□□□ 0.03
TNFRSF1A-208ENST00000536194 DEFB132Q7Z7B7 95 aa15.25■□□□□ 0.03
TNFRSF1A-208ENST00000536194 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 ITGB4P16144 1822 aa15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 HMOX1P09601 288 aa15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 PRKRIP1Q9H875 184 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 RGPD4Q7Z3J3 1758 aa15.24■□□□□ 0.03
TNFRSF1A-208ENST00000536194 RREB1Q92766 1687 aa15.23■□□□□ 0.03
TNFRSF1A-208ENST00000536194 VIRMAQ69YN4 1812 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-208ENST00000536194 KCNQ2O43526 872 aa15.23■□□□□ 0.03
TNFRSF1A-208ENST00000536194 ACSBG1Q96GR2 724 aa15.23■□□□□ 0.03
TNFRSF1A-208ENST00000536194 CFAP53Q96M91 514 aa15.23■□□□□ 0.03
TNFRSF1A-208ENST00000536194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.23■□□□□ 0.03
TNFRSF1A-208ENST00000536194 MYBBP1AQ9BQG0 1328 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-208ENST00000536194 U2SURPO15042 1029 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-208ENST00000536194 SF3B2Q13435 895 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-208ENST00000536194 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-208ENST00000536194 SPG7Q9UQ90 795 aa15.21■□□□□ 0.03
TNFRSF1A-208ENST00000536194 APBA3O96018 575 aa15.2■□□□□ 0.02
TNFRSF1A-208ENST00000536194 PHKG2P15735 406 aa15.2■□□□□ 0.02
TNFRSF1A-208ENST00000536194 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-208ENST00000536194 NUP188Q5SRE5 1749 aa15.2■□□□□ 0.02
TNFRSF1A-208ENST00000536194 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
TNFRSF1A-208ENST00000536194 BAG6P46379 1132 aa15.19■□□□□ 0.02
TNFRSF1A-208ENST00000536194 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-208ENST00000536194 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-208ENST00000536194 CAMKK2Q96RR4 588 aa15.18■□□□□ 0.02
TNFRSF1A-208ENST00000536194 RSPH6AQ9H0K4 717 aa15.18■□□□□ 0.02
TNFRSF1A-208ENST00000536194 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 PRIM1P49642 420 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 EZH2Q15910 746 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 AMOTQ4VCS5 1084 aa15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 ZNF530Q6P9A1 599 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 IFNL2Q8IZJ0 200 aa15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 LY75O60449 1722 aa15.17■□□□□ 0.02
TNFRSF1A-208ENST00000536194 U2AF1L5P0DN76 240 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1A-208ENST00000536194 U2AF1Q01081 240 aaKnown RBP eCLIP15.16■□□□□ 0.02
TNFRSF1A-208ENST00000536194 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
TNFRSF1A-208ENST00000536194 MTHFSDQ2M296 383 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1A-208ENST00000536194 SYTL4Q96C24 671 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1A-208ENST00000536194 DLG5Q8TDM6 1919 aa15.14■□□□□ 0.01
TNFRSF1A-208ENST00000536194 PLSCR1O15162 318 aa15.14■□□□□ 0.01
TNFRSF1A-208ENST00000536194 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
TNFRSF1A-208ENST00000536194 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
TNFRSF1A-208ENST00000536194 PROM2Q8N271 834 aa15.13■□□□□ 0.01
TNFRSF1A-208ENST00000536194 FCHSD2O94868 740 aa15.12■□□□□ 0.01
TNFRSF1A-208ENST00000536194 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
TNFRSF1A-208ENST00000536194 PAPPAQ13219 1627 aa15.12■□□□□ 0.01
TNFRSF1A-208ENST00000536194 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
TNFRSF1A-208ENST00000536194 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
TNFRSF1A-208ENST00000536194 PIGBQ92521 554 aa15.11■□□□□ 0.01
TNFRSF1A-208ENST00000536194 DCAF5Q96JK2 942 aa15.11■□□□□ 0.01
TNFRSF1A-208ENST00000536194 PLEKHF1Q96S99 279 aa15.11■□□□□ 0.01
TNFRSF1A-208ENST00000536194 MRC1P22897 1456 aa15.11■□□□□ 0.01
TNFRSF1A-208ENST00000536194 SIPA1L3O60292 1781 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-208ENST00000536194 ANP32CO43423 234 aa15.1■□□□□ 0.01
TNFRSF1A-208ENST00000536194 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-208ENST00000536194 LGR6Q9HBX8 967 aa15.1■□□□□ 0.01
TNFRSF1A-208ENST00000536194 TAF1LQ8IZX4 1826 aa15.09■□□□□ 0.01
TNFRSF1A-208ENST00000536194 TXNRD1Q16881 649 aa15.09■□□□□ 0.01
TNFRSF1A-208ENST00000536194 MAP3K5Q99683 1374 aa15.09■□□□□ 0.01
TNFRSF1A-208ENST00000536194 ERVV-2B6SEH9 535 aa15.08■□□□□ 0
TNFRSF1A-208ENST00000536194 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-208ENST00000536194 GAS2L2Q8NHY3 880 aa15.08■□□□□ 0
TNFRSF1A-208ENST00000536194 TMOD3Q9NYL9 352 aa15.08■□□□□ 0
TNFRSF1A-208ENST00000536194 C5P01031 1676 aa15.07■□□□□ 0
TNFRSF1A-208ENST00000536194 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
TNFRSF1A-208ENST00000536194 PALLDQ8WX93 1383 aa15.07■□□□□ 0
TNFRSF1A-208ENST00000536194 TUBGCP6Q96RT7 1819 aa15.06■□□□□ 0
TNFRSF1A-208ENST00000536194 KCNQ4P56696 695 aa15.06■□□□□ 0
TNFRSF1A-208ENST00000536194 ANO8Q9HCE9 1232 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-208ENST00000536194 ASAP1Q9ULH1 1129 aa15.06■□□□□ 0
TNFRSF1A-208ENST00000536194 GNAT3A8MTJ3 354 aa15.05■□□□□ -0
TNFRSF1A-208ENST00000536194 CABP4P57796 275 aa15.05■□□□□ -0
TNFRSF1A-208ENST00000536194 NFATC2IPQ8NCF5 419 aa15.05■□□□□ -0
TNFRSF1A-208ENST00000536194 IL17REQ8NFR9 667 aa15.05■□□□□ -0
TNFRSF1A-208ENST00000536194 ATG3Q9NT62 314 aa15.05■□□□□ -0
TNFRSF1A-208ENST00000536194 ADAMTS8Q9UP79 889 aa15.05■□□□□ -0
TNFRSF1A-208ENST00000536194 UBR2Q8IWV8 1755 aa15.04■□□□□ -0
TNFRSF1A-208ENST00000536194 ZNF831Q5JPB2 1677 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms