RNA–Protein interactions for RNA: ENST00000536034.1

LINC02449-203, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-203ENST00000536034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.37■□□□□ 0.85
LINC02449-203ENST00000536034 PARD3Q8TEW0 1356 aa20.36■□□□□ 0.85
LINC02449-203ENST00000536034 DIAPH1O60610 1272 aaKnown RBP20.36■□□□□ 0.85
LINC02449-203ENST00000536034 PPP2R1AP30153 589 aa20.36■□□□□ 0.85
LINC02449-203ENST00000536034 BCL11BQ9C0K0 894 aaPredicted RBP20.36■□□□□ 0.85
LINC02449-203ENST00000536034 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
LINC02449-203ENST00000536034 PCDH11YQ9BZA8 1340 aa20.35■□□□□ 0.85
LINC02449-203ENST00000536034 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
LINC02449-203ENST00000536034 SPG7Q9UQ90 795 aa20.35■□□□□ 0.85
LINC02449-203ENST00000536034 KDRP35968 1356 aa20.34■□□□□ 0.85
LINC02449-203ENST00000536034 PKD1L3Q7Z443 1732 aa20.34■□□□□ 0.85
LINC02449-203ENST00000536034 SHANK3Q9BYB0 1731 aa20.34■□□□□ 0.85
LINC02449-203ENST00000536034 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
LINC02449-203ENST00000536034 APBA3O96018 575 aa20.34■□□□□ 0.85
LINC02449-203ENST00000536034 DEFB132Q7Z7B7 95 aa20.34■□□□□ 0.85
LINC02449-203ENST00000536034 COL3A1P02461 1466 aaPredicted RBP20.34■□□□□ 0.85
LINC02449-203ENST00000536034 SBF2Q86WG5 1849 aa20.34■□□□□ 0.85
LINC02449-203ENST00000536034 RALBP1Q15311 655 aa20.32■□□□□ 0.84
LINC02449-203ENST00000536034 NHSQ6T4R5 1651 aa20.32■□□□□ 0.84
LINC02449-203ENST00000536034 SULT6B1Q6IMI4 303 aa20.31■□□□□ 0.84
LINC02449-203ENST00000536034 EN1Q05925 392 aaPredicted RBP20.3■□□□□ 0.84
LINC02449-203ENST00000536034 CAMKK2Q96RR4 588 aa20.3■□□□□ 0.84
LINC02449-203ENST00000536034 PLSCR1O15162 318 aa20.29■□□□□ 0.84
LINC02449-203ENST00000536034 CYP27B1O15528 508 aa20.29■□□□□ 0.84
LINC02449-203ENST00000536034 AMOTQ4VCS5 1084 aa20.29■□□□□ 0.84
LINC02449-203ENST00000536034 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
LINC02449-203ENST00000536034 KCNQ2O43526 872 aa20.28■□□□□ 0.84
LINC02449-203ENST00000536034 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
LINC02449-203ENST00000536034 ACSBG1Q96GR2 724 aa20.28■□□□□ 0.84
LINC02449-203ENST00000536034 RGPD3A6NKT7 1758 aaPredicted RBP20.27■□□□□ 0.84
LINC02449-203ENST00000536034 RGPD4Q7Z3J3 1758 aa20.27■□□□□ 0.84
LINC02449-203ENST00000536034 NKX1-1Q15270 411 aaPredicted RBP20.27■□□□□ 0.84
LINC02449-203ENST00000536034 PTF1AQ7RTS3 328 aa20.27■□□□□ 0.84
LINC02449-203ENST00000536034 NUDCQ9Y266 331 aa20.27■□□□□ 0.84
LINC02449-203ENST00000536034 EZH2Q15910 746 aaKnown RBP20.26■□□□□ 0.83
LINC02449-203ENST00000536034 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
LINC02449-203ENST00000536034 U2SURPO15042 1029 aaKnown RBP20.25■□□□□ 0.83
LINC02449-203ENST00000536034 PHKG2P15735 406 aa20.25■□□□□ 0.83
LINC02449-203ENST00000536034 HMOX1P09601 288 aa20.24■□□□□ 0.83
LINC02449-203ENST00000536034 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
LINC02449-203ENST00000536034 DOT1LQ8TEK3 1739 aa20.24■□□□□ 0.83
LINC02449-203ENST00000536034 HSP90AB1P08238 724 aaKnown RBP20.22■□□□□ 0.83
LINC02449-203ENST00000536034 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
LINC02449-203ENST00000536034 SYTL4Q96C24 671 aaPredicted RBP20.22■□□□□ 0.83
LINC02449-203ENST00000536034 RREB1Q92766 1687 aa20.22■□□□□ 0.83
LINC02449-203ENST00000536034 MYBBP1AQ9BQG0 1328 aaKnown RBP20.22■□□□□ 0.83
LINC02449-203ENST00000536034 BTAF1O14981 1849 aa20.2■□□□□ 0.82
LINC02449-203ENST00000536034 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
LINC02449-203ENST00000536034 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
LINC02449-203ENST00000536034 DCAF5Q96JK2 942 aa20.19■□□□□ 0.82
LINC02449-203ENST00000536034 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
LINC02449-203ENST00000536034 FCHSD2O94868 740 aa20.17■□□□□ 0.82
LINC02449-203ENST00000536034 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
LINC02449-203ENST00000536034 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.82
LINC02449-203ENST00000536034 TXNRD1Q16881 649 aa20.17■□□□□ 0.82
LINC02449-203ENST00000536034 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
LINC02449-203ENST00000536034 ERVV-2B6SEH9 535 aa20.16■□□□□ 0.82
LINC02449-203ENST00000536034 AKAP4Q5JQC9 854 aa20.16■□□□□ 0.82
LINC02449-203ENST00000536034 PROM2Q8N271 834 aa20.16■□□□□ 0.82
LINC02449-203ENST00000536034 NUP188Q5SRE5 1749 aa20.16■□□□□ 0.82
LINC02449-203ENST00000536034 NBPF14Q5TI25 921 aa20.15■□□□□ 0.82
LINC02449-203ENST00000536034 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
LINC02449-203ENST00000536034 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
LINC02449-203ENST00000536034 SLC27A3Q5K4L6 730 aa20.14■□□□□ 0.81
LINC02449-203ENST00000536034 TMOD3Q9NYL9 352 aa20.14■□□□□ 0.81
LINC02449-203ENST00000536034 KAT6BQ8WYB5 2073 aa20.14■□□□□ 0.81
LINC02449-203ENST00000536034 KDM6AO15550 1401 aaPredicted RBP20.13■□□□□ 0.81
LINC02449-203ENST00000536034 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
LINC02449-203ENST00000536034 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
LINC02449-203ENST00000536034 PIGBQ92521 554 aa20.13■□□□□ 0.81
LINC02449-203ENST00000536034 SMARCC1Q92922 1105 aaPredicted RBP20.13■□□□□ 0.81
LINC02449-203ENST00000536034 ITGB4P16144 1822 aa20.11■□□□□ 0.81
LINC02449-203ENST00000536034 HMGB2P26583 209 aaKnown RBP20.11■□□□□ 0.81
LINC02449-203ENST00000536034 PNNQ9H307 717 aaKnown RBP20.1■□□□□ 0.81
LINC02449-203ENST00000536034 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
LINC02449-203ENST00000536034 CABP4P57796 275 aa20.09■□□□□ 0.81
LINC02449-203ENST00000536034 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
LINC02449-203ENST00000536034 LY75O60449 1722 aa20.09■□□□□ 0.81
LINC02449-203ENST00000536034 MAP3K5Q99683 1374 aa20.08■□□□□ 0.81
LINC02449-203ENST00000536034 NEFMP07197 916 aa20.08■□□□□ 0.81
LINC02449-203ENST00000536034 LRRC4BQ9NT99 713 aa20.08■□□□□ 0.81
LINC02449-203ENST00000536034 ADAMTS7Q9UKP4 1686 aa20.07■□□□□ 0.8
LINC02449-203ENST00000536034 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
LINC02449-203ENST00000536034 RNMTO43148 476 aaKnown RBP20.07■□□□□ 0.8
LINC02449-203ENST00000536034 R3HDM1Q15032 1099 aaKnown RBP20.07■□□□□ 0.8
LINC02449-203ENST00000536034 SCN11AQ9UI33 1791 aa20.06■□□□□ 0.8
LINC02449-203ENST00000536034 ANP32CO43423 234 aa20.06■□□□□ 0.8
LINC02449-203ENST00000536034 STK32BQ9NY57 414 aa20.06■□□□□ 0.8
LINC02449-203ENST00000536034 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
LINC02449-203ENST00000536034 PAPPAQ13219 1627 aa20.05■□□□□ 0.8
LINC02449-203ENST00000536034 MRC1P22897 1456 aa20.05■□□□□ 0.8
LINC02449-203ENST00000536034 PSDA5PKW4 1024 aaPredicted RBP20.05■□□□□ 0.8
LINC02449-203ENST00000536034 SLC52A2Q9HAB3 445 aa20.05■□□□□ 0.8
LINC02449-203ENST00000536034 LGR6Q9HBX8 967 aa20.05■□□□□ 0.8
LINC02449-203ENST00000536034 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
LINC02449-203ENST00000536034 ASAP1Q9ULH1 1129 aa20.05■□□□□ 0.8
LINC02449-203ENST00000536034 SLC15A2Q16348 729 aa20.04■□□□□ 0.8
LINC02449-203ENST00000536034 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
LINC02449-203ENST00000536034 PLEKHF1Q96S99 279 aa20.04■□□□□ 0.8
LINC02449-203ENST00000536034 ATG3Q9NT62 314 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms