RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
CCDC60-202ENST00000535685 HOXC9P31274 260 aa15.03■□□□□ -0
CCDC60-202ENST00000535685 KIF24Q5T7B8 1368 aa15.02■□□□□ -0
CCDC60-202ENST00000535685 RGPD2P0DJD1 1756 aa15.02□□□□□ -0.01
CCDC60-202ENST00000535685 NHSQ6T4R5 1651 aa15.01□□□□□ -0.01
CCDC60-202ENST00000535685 PSDA5PKW4 1024 aaPredicted RBP15.01□□□□□ -0.01
CCDC60-202ENST00000535685 CARD14Q9BXL6 1004 aa15.01□□□□□ -0.01
CCDC60-202ENST00000535685 AMPHP49418 695 aa15□□□□□ -0.01
CCDC60-202ENST00000535685 R3HDM1Q15032 1099 aaKnown RBP15□□□□□ -0.01
CCDC60-202ENST00000535685 NBPF14Q5TI25 921 aa15□□□□□ -0.01
CCDC60-202ENST00000535685 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
CCDC60-202ENST00000535685 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
CCDC60-202ENST00000535685 GGNBP2Q9H3C7 697 aa15□□□□□ -0.01
CCDC60-202ENST00000535685 MAP2P11137 1827 aaKnown RBP14.99□□□□□ -0.01
CCDC60-202ENST00000535685 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCDC60-202ENST00000535685 FBLN1P23142 703 aa14.98□□□□□ -0.01
CCDC60-202ENST00000535685 PTF1AQ7RTS3 328 aa14.98□□□□□ -0.01
CCDC60-202ENST00000535685 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
CCDC60-202ENST00000535685 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
CCDC60-202ENST00000535685 INSRP06213 1382 aa14.97□□□□□ -0.01
CCDC60-202ENST00000535685 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
CCDC60-202ENST00000535685 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
CCDC60-202ENST00000535685 RRS1Q15050 365 aaKnown RBP14.96□□□□□ -0.01
CCDC60-202ENST00000535685 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
CCDC60-202ENST00000535685 SHANK3Q9BYB0 1731 aa14.96□□□□□ -0.01
CCDC60-202ENST00000535685 BTAF1O14981 1849 aa14.96□□□□□ -0.01
CCDC60-202ENST00000535685 FLT4P35916 1363 aa14.96□□□□□ -0.02
CCDC60-202ENST00000535685 CGNL1Q0VF96 1302 aa14.95□□□□□ -0.02
CCDC60-202ENST00000535685 HSPA5P11021 654 aaKnown RBP14.95□□□□□ -0.02
CCDC60-202ENST00000535685 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
CCDC60-202ENST00000535685 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
CCDC60-202ENST00000535685 KCNQ2O43526 872 aa14.93□□□□□ -0.02
CCDC60-202ENST00000535685 NBPF6Q5VWK0 638 aa14.93□□□□□ -0.02
CCDC60-202ENST00000535685 NBPF4Q96M43 638 aa14.93□□□□□ -0.02
CCDC60-202ENST00000535685 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
CCDC60-202ENST00000535685 TXNRD1Q16881 649 aa14.92□□□□□ -0.02
CCDC60-202ENST00000535685 HSP90AB2PQ58FF8 381 aa14.92□□□□□ -0.02
CCDC60-202ENST00000535685 CASZ1Q86V15 1759 aa14.92□□□□□ -0.02
CCDC60-202ENST00000535685 MEGF6O75095 1541 aa14.92□□□□□ -0.02
CCDC60-202ENST00000535685 ZCRB1Q8TBF4 217 aaKnown RBP14.91□□□□□ -0.02
CCDC60-202ENST00000535685 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
CCDC60-202ENST00000535685 ANO8Q9HCE9 1232 aaPredicted RBP14.9□□□□□ -0.02
CCDC60-202ENST00000535685 WASHC2AQ641Q2 1341 aa14.9□□□□□ -0.02
CCDC60-202ENST00000535685 PAPPAQ13219 1627 aa14.89□□□□□ -0.03
CCDC60-202ENST00000535685 ACSBG1Q96GR2 724 aa14.89□□□□□ -0.03
CCDC60-202ENST00000535685 DOT1LQ8TEK3 1739 aa14.89□□□□□ -0.03
CCDC60-202ENST00000535685 NSD2O96028 1365 aa14.88□□□□□ -0.03
CCDC60-202ENST00000535685 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
CCDC60-202ENST00000535685 RAPGEF4Q8WZA2 1011 aa14.88□□□□□ -0.03
CCDC60-202ENST00000535685 EMILIN1Q9Y6C2 1016 aa14.88□□□□□ -0.03
CCDC60-202ENST00000535685 LY75O60449 1722 aa14.88□□□□□ -0.03
CCDC60-202ENST00000535685 PKD1L3Q7Z443 1732 aa14.88□□□□□ -0.03
CCDC60-202ENST00000535685 QSER1Q2KHR3 1735 aa14.87□□□□□ -0.03
CCDC60-202ENST00000535685 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
CCDC60-202ENST00000535685 PANK3Q9H999 370 aa14.87□□□□□ -0.03
CCDC60-202ENST00000535685 SPON1Q9HCB6 807 aa14.87□□□□□ -0.03
CCDC60-202ENST00000535685 POLKQ9UBT6 870 aa14.87□□□□□ -0.03
CCDC60-202ENST00000535685 PLEKHG2Q9H7P9 1386 aa14.86□□□□□ -0.03
CCDC60-202ENST00000535685 TATP17735 454 aaPredicted RBP14.86□□□□□ -0.03
CCDC60-202ENST00000535685 SLC15A2Q16348 729 aa14.86□□□□□ -0.03
CCDC60-202ENST00000535685 SLC27A3Q5K4L6 730 aa14.86□□□□□ -0.03
CCDC60-202ENST00000535685 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
CCDC60-202ENST00000535685 PRIM1P49642 420 aaKnown RBP14.84□□□□□ -0.03
CCDC60-202ENST00000535685 USHBP1Q8N6Y0 703 aa14.84□□□□□ -0.03
CCDC60-202ENST00000535685 POLR3GLQ9BT43 218 aa14.84□□□□□ -0.03
CCDC60-202ENST00000535685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCDC60-202ENST00000535685 PCDH11XQ9BZA7 1347 aa14.84□□□□□ -0.03
CCDC60-202ENST00000535685 PCDH11YQ9BZA8 1340 aa14.84□□□□□ -0.03
CCDC60-202ENST00000535685 ITGB4P16144 1822 aa14.83□□□□□ -0.04
CCDC60-202ENST00000535685 NKX1-1Q15270 411 aaPredicted RBP14.82□□□□□ -0.04
CCDC60-202ENST00000535685 EYA1Q99502 592 aa14.82□□□□□ -0.04
CCDC60-202ENST00000535685 LRRC4BQ9NT99 713 aa14.82□□□□□ -0.04
CCDC60-202ENST00000535685 CYP27B1O15528 508 aa14.81□□□□□ -0.04
CCDC60-202ENST00000535685 COL24A1Q17RW2 1714 aa14.8□□□□□ -0.04
CCDC60-202ENST00000535685 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
CCDC60-202ENST00000535685 HMGB2P26583 209 aaKnown RBP14.8□□□□□ -0.04
CCDC60-202ENST00000535685 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
CCDC60-202ENST00000535685 PDGFDQ9GZP0 370 aaPredicted RBP14.8□□□□□ -0.04
CCDC60-202ENST00000535685 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
CCDC60-202ENST00000535685 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
CCDC60-202ENST00000535685 TAF1LQ8IZX4 1826 aa14.79□□□□□ -0.04
CCDC60-202ENST00000535685 TUBGCP6Q96RT7 1819 aa14.79□□□□□ -0.04
CCDC60-202ENST00000535685 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
CCDC60-202ENST00000535685 KNSTRNQ9Y448 316 aa14.79□□□□□ -0.04
CCDC60-202ENST00000535685 TOGARAM1Q9Y4F4 1720 aa14.79□□□□□ -0.04
CCDC60-202ENST00000535685 IGSF1Q8N6C5 1336 aa14.78□□□□□ -0.04
CCDC60-202ENST00000535685 PTGER2P43116 358 aa14.78□□□□□ -0.04
CCDC60-202ENST00000535685 ZNF827Q17R98 1081 aa14.78□□□□□ -0.04
CCDC60-202ENST00000535685 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
CCDC60-202ENST00000535685 SYTL4Q96C24 671 aaPredicted RBP14.78□□□□□ -0.04
CCDC60-202ENST00000535685 SGIP1Q9BQI5 828 aa14.78□□□□□ -0.04
CCDC60-202ENST00000535685 MTFR1LQ9H019 292 aa14.78□□□□□ -0.04
CCDC60-202ENST00000535685 MORC1Q86VD1 984 aa14.77□□□□□ -0.05
CCDC60-202ENST00000535685 SLC16A10Q8TF71 515 aa14.77□□□□□ -0.05
CCDC60-202ENST00000535685 PPP1R1BQ9UD71 204 aaPredicted RBP14.77□□□□□ -0.05
CCDC60-202ENST00000535685 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
CCDC60-202ENST00000535685 ZBTB7AO95365 584 aa14.76□□□□□ -0.05
CCDC60-202ENST00000535685 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
CCDC60-202ENST00000535685 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
CCDC60-202ENST00000535685 SMARCC1Q92922 1105 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms