RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	BCAR3	O75815	825 aa		18.71	■□□□□ 0.59
NCAPD3-213	ENST00000534532	STK38	Q15208	465 aa		18.71	■□□□□ 0.59
NCAPD3-213	ENST00000534532	AIDA	Q96BJ3	306 aa		18.7	■□□□□ 0.58
NCAPD3-213	ENST00000534532	TRMT112	Q9UI30	125 aa	Known RBP	18.7	■□□□□ 0.58
NCAPD3-213	ENST00000534532	KIN	O60870	393 aa	Known RBP	18.7	■□□□□ 0.58
NCAPD3-213	ENST00000534532	GPS2	Q13227	327 aa		18.7	■□□□□ 0.58
NCAPD3-213	ENST00000534532	MVP	Q14764	893 aa	Known RBP	18.7	■□□□□ 0.58
NCAPD3-213	ENST00000534532	IFNL2	Q8IZJ0	200 aa		18.7	■□□□□ 0.58
NCAPD3-213	ENST00000534532	ADGRF5	Q8IZF2	1346 aa		18.69	■□□□□ 0.58
NCAPD3-213	ENST00000534532	CDKL5	O76039	1030 aa		18.69	■□□□□ 0.58
NCAPD3-213	ENST00000534532	MIS18A	Q9NYP9	233 aa		18.69	■□□□□ 0.58
NCAPD3-213	ENST00000534532	NAIP	Q13075	1403 aa		18.69	■□□□□ 0.58
NCAPD3-213	ENST00000534532	PIP4K2A	P48426	406 aa	Predicted RBP	18.69	■□□□□ 0.58
NCAPD3-213	ENST00000534532	IFIT5	Q13325	482 aa	Known RBP	18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	PAF1	Q8N7H5	531 aa		18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	MYD88	Q99836	296 aa		18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	NOL7	Q9UMY1	257 aa	Known RBP	18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	ABCC5	O15440	1437 aa		18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	IFT57	Q9NWB7	429 aa		18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	ZNF592	Q92610	1267 aa		18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.68	■□□□□ 0.58
NCAPD3-213	ENST00000534532	TTC21B	Q7Z4L5	1316 aa		18.67	■□□□□ 0.58
NCAPD3-213	ENST00000534532	FAM135A	Q9P2D6	1515 aa		18.67	■□□□□ 0.58
NCAPD3-213	ENST00000534532	ZNF608	Q9ULD9	1512 aa	Predicted RBP	18.67	■□□□□ 0.58
NCAPD3-213	ENST00000534532	USP5	P45974	858 aa		18.67	■□□□□ 0.58
NCAPD3-213	ENST00000534532	ARID3A	Q99856	593 aa		18.67	■□□□□ 0.58
NCAPD3-213	ENST00000534532	KRT32	Q14532	448 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	NPHP3	Q7Z494	1330 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	SLF2	Q8IX21	1173 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	RDX	P35241	583 aa	Known RBP	18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	HYPK	Q9NX55	129 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	URB2	Q14146	1524 aa	Known RBP	18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	IL1RAPL2	Q9NP60	686 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	EMILIN1	Q9Y6C2	1016 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532		A0A087WZG4	1122 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	MAP4K4	O95819	1239 aa	Predicted RBP	18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	POLR3D	P05423	398 aa	Predicted RBP	18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	SYCP1	Q15431	976 aa		18.66	■□□□□ 0.58
NCAPD3-213	ENST00000534532	FILIP1L	Q4L180	1135 aa		18.65	■□□□□ 0.58
NCAPD3-213	ENST00000534532	BLOC1S2	Q6QNY1	142 aa		18.65	■□□□□ 0.58
NCAPD3-213	ENST00000534532	ZNF76	P36508	570 aa		18.65	■□□□□ 0.58
NCAPD3-213	ENST00000534532	DZIP1	Q86YF9	867 aa	Known RBP	18.65	■□□□□ 0.58
NCAPD3-213	ENST00000534532	CCDC173	Q0VFZ6	552 aa		18.65	■□□□□ 0.58
NCAPD3-213	ENST00000534532	DBF4	Q9UBU7	674 aa	Predicted RBP	18.65	■□□□□ 0.58
NCAPD3-213	ENST00000534532	BICRA	Q9NZM4	1560 aa		18.65	■□□□□ 0.58
NCAPD3-213	ENST00000534532	ABCC11	Q96J66	1382 aa		18.64	■□□□□ 0.57
NCAPD3-213	ENST00000534532	TTLL12	Q14166	644 aa	Predicted RBP	18.64	■□□□□ 0.57
NCAPD3-213	ENST00000534532	KIF1BP	Q96EK5	621 aa		18.64	■□□□□ 0.57
NCAPD3-213	ENST00000534532	C14orf93	Q9H972	538 aa	Known RBP	18.64	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ANKRD18B	A2A2Z9	1011 aa		18.64	■□□□□ 0.57
NCAPD3-213	ENST00000534532	SLC5A1	P13866	664 aa		18.64	■□□□□ 0.57
NCAPD3-213	ENST00000534532	IMMT	Q16891	758 aa	Known RBP	18.64	■□□□□ 0.57
NCAPD3-213	ENST00000534532	NOS1	P29475	1434 aa		18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	AEBP1	Q8IUX7	1158 aa		18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	THUMPD2	Q9BTF0	503 aa	Known RBP	18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ZHX3	Q9H4I2	956 aa		18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	NCOA1	Q15788	1441 aa		18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	RFC4	P35249	363 aa		18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ANKRD24	Q8TF21	1146 aa		18.63	■□□□□ 0.57
NCAPD3-213	ENST00000534532	C6orf229	H3BNL8	230 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	RAB11FIP3	O75154	756 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	STK3	Q13188	491 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	DCTN1	Q14203	1278 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	CHD1L	Q86WJ1	897 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	LETM1	O95202	739 aa	Predicted RBP	18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	STIM1	Q13586	685 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	PDILT	Q8N807	584 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	WASF1	Q92558	559 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	MKNK2	Q9HBH9	465 aa		18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.62	■□□□□ 0.57
NCAPD3-213	ENST00000534532	MAP3K12	Q12852	859 aa		18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	CHRNA2	Q15822	529 aa		18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	HSP90AB2P	Q58FF8	381 aa		18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ACE	P12821	1306 aa		18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	CDC5L	Q99459	802 aa	Known RBP	18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	MBD3	O95983	291 aa		18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	PPP1R42	Q7Z4L9	355 aa		18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	PDCL3	Q9H2J4	239 aa		18.61	■□□□□ 0.57
NCAPD3-213	ENST00000534532	PCF11	O94913	1555 aa	Known RBP	18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	DNAAF4	Q8WXU2	420 aa		18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	GSE1	Q14687	1217 aa		18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	CWC27	Q6UX04	472 aa	Known RBP	18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	DDX46	Q7L014	1031 aa	Known RBP	18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	UHRF1BP1L	A0JNW5	1464 aa		18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ASXL2	Q76L83	1435 aa		18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	FAM13B	Q9NYF5	915 aa		18.6	■□□□□ 0.57
NCAPD3-213	ENST00000534532	GLRX3	O76003	335 aa	Known RBP	18.59	■□□□□ 0.57
NCAPD3-213	ENST00000534532	CEBPZ	Q03701	1054 aa	Known RBP	18.59	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ALDH1L2	Q3SY69	923 aa		18.58	■□□□□ 0.57
NCAPD3-213	ENST00000534532	SMARCE1	Q969G3	411 aa		18.58	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.58	■□□□□ 0.57
NCAPD3-213	ENST00000534532	GPT	P24298	496 aa		18.58	■□□□□ 0.57
NCAPD3-213	ENST00000534532	TNIP1	Q15025	636 aa		18.58	■□□□□ 0.57
NCAPD3-213	ENST00000534532	ZBTB3	Q9H5J0	574 aa		18.58	■□□□□ 0.57
NCAPD3-213	ENST00000534532	PTPN23	Q9H3S7	1636 aa		18.58	■□□□□ 0.56
NCAPD3-213	ENST00000534532	NSD2	O96028	1365 aa		18.58	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms