RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 HMOX1P09601 288 aa18.73■□□□□ 0.59
CMTM1-218ENST00000533915 AMOTQ4VCS5 1084 aa18.73■□□□□ 0.59
CMTM1-218ENST00000533915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.73■□□□□ 0.59
CMTM1-218ENST00000533915 DISP2A7MBM2 1401 aa18.73■□□□□ 0.59
CMTM1-218ENST00000533915 PLEKHO1Q53GL0 409 aaPredicted RBP18.72■□□□□ 0.59
CMTM1-218ENST00000533915 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
CMTM1-218ENST00000533915 ZCRB1Q8TBF4 217 aaKnown RBP18.72■□□□□ 0.59
CMTM1-218ENST00000533915 OVOS2A0A0G2JMS6 1433 aa18.72■□□□□ 0.59
CMTM1-218ENST00000533915 THSD7AQ9UPZ6 1657 aa18.72■□□□□ 0.59
CMTM1-218ENST00000533915 RGS12O14924 1447 aa18.7■□□□□ 0.58
CMTM1-218ENST00000533915 MEGF6O75095 1541 aa18.69■□□□□ 0.58
CMTM1-218ENST00000533915 TNS2Q63HR2 1409 aa18.69■□□□□ 0.58
CMTM1-218ENST00000533915 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
CMTM1-218ENST00000533915 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
CMTM1-218ENST00000533915 PCDH11XQ9BZA7 1347 aa18.69■□□□□ 0.58
CMTM1-218ENST00000533915 PCDH11YQ9BZA8 1340 aa18.69■□□□□ 0.58
CMTM1-218ENST00000533915 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
CMTM1-218ENST00000533915 MIER1Q8N108 512 aa18.68■□□□□ 0.58
CMTM1-218ENST00000533915 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
CMTM1-218ENST00000533915 PNISRQ8TF01 805 aaKnown RBP18.67■□□□□ 0.58
CMTM1-218ENST00000533915 SOCS7O14512 581 aa18.66■□□□□ 0.58
CMTM1-218ENST00000533915 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
CMTM1-218ENST00000533915 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
CMTM1-218ENST00000533915 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
CMTM1-218ENST00000533915 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
CMTM1-218ENST00000533915 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
CMTM1-218ENST00000533915 LRRC37A3O60309 1634 aa18.66■□□□□ 0.58
CMTM1-218ENST00000533915 HSP90AB1P08238 724 aaKnown RBP18.65■□□□□ 0.58
CMTM1-218ENST00000533915 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
CMTM1-218ENST00000533915 PKD1L3Q7Z443 1732 aa18.64■□□□□ 0.57
CMTM1-218ENST00000533915 ZNF530Q6P9A1 599 aaPredicted RBP18.64■□□□□ 0.57
CMTM1-218ENST00000533915 BRWD3Q6RI45 1802 aa18.64■□□□□ 0.57
CMTM1-218ENST00000533915 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
CMTM1-218ENST00000533915 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
CMTM1-218ENST00000533915 KAT6BQ8WYB5 2073 aa18.62■□□□□ 0.57
CMTM1-218ENST00000533915 ILDR2Q71H61 639 aa18.62■□□□□ 0.57
CMTM1-218ENST00000533915 AKAP4Q5JQC9 854 aa18.61■□□□□ 0.57
CMTM1-218ENST00000533915 FAM9BQ8IZU0 186 aa18.61■□□□□ 0.57
CMTM1-218ENST00000533915 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
CMTM1-218ENST00000533915 PHKG2P15735 406 aa18.6■□□□□ 0.57
CMTM1-218ENST00000533915 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
CMTM1-218ENST00000533915 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
CMTM1-218ENST00000533915 CYP27B1O15528 508 aa18.59■□□□□ 0.57
CMTM1-218ENST00000533915 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
CMTM1-218ENST00000533915 BCL9O00512 1426 aa18.58■□□□□ 0.57
CMTM1-218ENST00000533915 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
CMTM1-218ENST00000533915 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.56
CMTM1-218ENST00000533915 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.56
CMTM1-218ENST00000533915 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
CMTM1-218ENST00000533915 DCAF5Q96JK2 942 aa18.58■□□□□ 0.56
CMTM1-218ENST00000533915 LMOD3Q0VAK6 560 aa18.57■□□□□ 0.56
CMTM1-218ENST00000533915 NFE2L2Q16236 605 aa18.57■□□□□ 0.56
CMTM1-218ENST00000533915 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
CMTM1-218ENST00000533915 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
CMTM1-218ENST00000533915 HTATSF1O43719 755 aaKnown RBP18.56■□□□□ 0.56
CMTM1-218ENST00000533915 FAM182BQ5T319 152 aa18.54■□□□□ 0.56
CMTM1-218ENST00000533915 ERVV-2B6SEH9 535 aa18.53■□□□□ 0.56
CMTM1-218ENST00000533915 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
CMTM1-218ENST00000533915 RIPK4P57078 832 aa18.53■□□□□ 0.56
CMTM1-218ENST00000533915 SF3B2Q13435 895 aaKnown RBP18.52■□□□□ 0.56
CMTM1-218ENST00000533915 MPRIPQ6WCQ1 1025 aa18.52■□□□□ 0.56
CMTM1-218ENST00000533915 CCDC125Q86Z20 511 aa18.52■□□□□ 0.56
CMTM1-218ENST00000533915 NGEFQ8N5V2 710 aa18.52■□□□□ 0.56
CMTM1-218ENST00000533915 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
CMTM1-218ENST00000533915 APAF1O14727 1248 aa18.51■□□□□ 0.55
CMTM1-218ENST00000533915 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
CMTM1-218ENST00000533915 EP400Q96L91 3159 aa18.51■□□□□ 0.55
CMTM1-218ENST00000533915 CABP4P57796 275 aa18.5■□□□□ 0.55
CMTM1-218ENST00000533915 TEFQ10587 303 aa18.5■□□□□ 0.55
CMTM1-218ENST00000533915 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
CMTM1-218ENST00000533915 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
CMTM1-218ENST00000533915 ACSBG1Q96GR2 724 aa18.5■□□□□ 0.55
CMTM1-218ENST00000533915 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
CMTM1-218ENST00000533915 RNMTO43148 476 aaKnown RBP18.49■□□□□ 0.55
CMTM1-218ENST00000533915 TRIM37O94972 964 aa18.49■□□□□ 0.55
CMTM1-218ENST00000533915 PRIM1P49642 420 aaKnown RBP18.49■□□□□ 0.55
CMTM1-218ENST00000533915 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
CMTM1-218ENST00000533915 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
CMTM1-218ENST00000533915 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
CMTM1-218ENST00000533915 DLG5Q8TDM6 1919 aa18.48■□□□□ 0.55
CMTM1-218ENST00000533915 DOT1LQ8TEK3 1739 aa18.47■□□□□ 0.55
CMTM1-218ENST00000533915 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
CMTM1-218ENST00000533915 KDM6AO15550 1401 aaPredicted RBP18.47■□□□□ 0.55
CMTM1-218ENST00000533915 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
CMTM1-218ENST00000533915 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
CMTM1-218ENST00000533915 NHSQ6T4R5 1651 aa18.46■□□□□ 0.55
CMTM1-218ENST00000533915 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
CMTM1-218ENST00000533915 MCM10Q7L590 875 aa18.45■□□□□ 0.54
CMTM1-218ENST00000533915 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
CMTM1-218ENST00000533915 ITGB4P16144 1822 aa18.44■□□□□ 0.54
CMTM1-218ENST00000533915 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
CMTM1-218ENST00000533915 KCNQ2O43526 872 aa18.44■□□□□ 0.54
CMTM1-218ENST00000533915 HMGB2P26583 209 aaKnown RBP18.44■□□□□ 0.54
CMTM1-218ENST00000533915 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
CMTM1-218ENST00000533915 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
CMTM1-218ENST00000533915 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
CMTM1-218ENST00000533915 APBA3O96018 575 aa18.43■□□□□ 0.54
CMTM1-218ENST00000533915 BAG6P46379 1132 aa18.43■□□□□ 0.54
CMTM1-218ENST00000533915 ADAMTS7Q9UKP4 1686 aa18.43■□□□□ 0.54
CMTM1-218ENST00000533915 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms