RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CPSF1Q10570 1443 aaKnown RBP12.61□□□□□ -0.39
CHKA-207ENST00000533728 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
CHKA-207ENST00000533728 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
CHKA-207ENST00000533728 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
CHKA-207ENST00000533728 KIF1AQ12756 1690 aa12.6□□□□□ -0.39
CHKA-207ENST00000533728 USP19O94966 1318 aa12.6□□□□□ -0.39
CHKA-207ENST00000533728 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
CHKA-207ENST00000533728 PLSCR1O15162 318 aa12.59□□□□□ -0.39
CHKA-207ENST00000533728 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
CHKA-207ENST00000533728 SLC15A2Q16348 729 aa12.58□□□□□ -0.4
CHKA-207ENST00000533728 WAPLQ7Z5K2 1190 aa12.58□□□□□ -0.4
CHKA-207ENST00000533728 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
CHKA-207ENST00000533728 EXOC6Q8TAG9 804 aa12.58□□□□□ -0.4
CHKA-207ENST00000533728 ANKARQ7Z5J8 1434 aa12.57□□□□□ -0.4
CHKA-207ENST00000533728 FYB1O15117 783 aa12.57□□□□□ -0.4
CHKA-207ENST00000533728 AAMPQ13685 434 aa12.57□□□□□ -0.4
CHKA-207ENST00000533728 WWC1Q8IX03 1113 aa12.57□□□□□ -0.4
CHKA-207ENST00000533728 CCDC146Q8IYE0 955 aa12.57□□□□□ -0.4
CHKA-207ENST00000533728 WASLO00401 505 aaPredicted RBP12.56□□□□□ -0.4
CHKA-207ENST00000533728 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
CHKA-207ENST00000533728 SBF2Q86WG5 1849 aa12.55□□□□□ -0.4
CHKA-207ENST00000533728 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
CHKA-207ENST00000533728 TCERG1O14776 1098 aaKnown RBP12.55□□□□□ -0.4
CHKA-207ENST00000533728 MS4A1P11836 297 aa12.55□□□□□ -0.4
CHKA-207ENST00000533728 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHKA-207ENST00000533728 SPATA31A1Q5TZJ5 1347 aa12.55□□□□□ -0.4
CHKA-207ENST00000533728 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
CHKA-207ENST00000533728 VIRMAQ69YN4 1812 aaKnown RBP12.54□□□□□ -0.4
CHKA-207ENST00000533728 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
CHKA-207ENST00000533728 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
CHKA-207ENST00000533728 IL16Q14005 1332 aa12.54□□□□□ -0.4
CHKA-207ENST00000533728 PROM2Q8N271 834 aa12.53□□□□□ -0.4
CHKA-207ENST00000533728 CRBNQ96SW2 442 aa12.53□□□□□ -0.4
CHKA-207ENST00000533728 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
CHKA-207ENST00000533728 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
CHKA-207ENST00000533728 USP54Q70EL1 1684 aa12.53□□□□□ -0.4
CHKA-207ENST00000533728 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
CHKA-207ENST00000533728 RGS19P49795 217 aa12.52□□□□□ -0.41
CHKA-207ENST00000533728 KRT28Q7Z3Y7 464 aa12.52□□□□□ -0.41
CHKA-207ENST00000533728 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
CHKA-207ENST00000533728 CUL9Q8IWT3 2517 aa12.52□□□□□ -0.41
CHKA-207ENST00000533728 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
CHKA-207ENST00000533728 POLD1P28340 1107 aa12.51□□□□□ -0.41
CHKA-207ENST00000533728 RBM46Q8TBY0 533 aaKnown RBP12.51□□□□□ -0.41
CHKA-207ENST00000533728 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
CHKA-207ENST00000533728 GGNBP2Q9H3C7 697 aa12.51□□□□□ -0.41
CHKA-207ENST00000533728 MYH16Q9H6N6 1097 aa12.51□□□□□ -0.41
CHKA-207ENST00000533728 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
CHKA-207ENST00000533728 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
CHKA-207ENST00000533728 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
CHKA-207ENST00000533728 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHKA-207ENST00000533728 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
CHKA-207ENST00000533728 ABHD8Q96I13 439 aa12.5□□□□□ -0.41
CHKA-207ENST00000533728 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
CHKA-207ENST00000533728 KDM2BQ8NHM5 1336 aa12.49□□□□□ -0.41
CHKA-207ENST00000533728 FCHSD2O94868 740 aa12.49□□□□□ -0.41
CHKA-207ENST00000533728 CENPQQ7L2Z9 268 aaPredicted RBP12.49□□□□□ -0.41
CHKA-207ENST00000533728 NUDT16Q96DE0 195 aaKnown RBP12.49□□□□□ -0.41
CHKA-207ENST00000533728 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
CHKA-207ENST00000533728 ARHGEF10O15013 1369 aa12.48□□□□□ -0.41
CHKA-207ENST00000533728 PRR36Q9H6K5 1346 aa12.48□□□□□ -0.41
CHKA-207ENST00000533728 PLIN1O60240 522 aa12.48□□□□□ -0.41
CHKA-207ENST00000533728 PRDM10Q9NQV6 1147 aa12.48□□□□□ -0.41
CHKA-207ENST00000533728 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
CHKA-207ENST00000533728 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
CHKA-207ENST00000533728 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
CHKA-207ENST00000533728 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
CHKA-207ENST00000533728 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
CHKA-207ENST00000533728 FSTL1Q12841 308 aa12.47□□□□□ -0.41
CHKA-207ENST00000533728 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
CHKA-207ENST00000533728 TXNRD1Q16881 649 aa12.46□□□□□ -0.41
CHKA-207ENST00000533728 USP35Q9P2H5 1018 aa12.46□□□□□ -0.41
CHKA-207ENST00000533728 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
CHKA-207ENST00000533728 RARSP54136 660 aaKnown RBP12.45□□□□□ -0.42
CHKA-207ENST00000533728 PSME1Q06323 249 aa12.45□□□□□ -0.42
CHKA-207ENST00000533728 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
CHKA-207ENST00000533728 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
CHKA-207ENST00000533728 OVOS2A0A0G2JMS6 1433 aa12.45□□□□□ -0.42
CHKA-207ENST00000533728 OVOS2A0A0J9YW53 1432 aa12.45□□□□□ -0.42
CHKA-207ENST00000533728 OVOS2Q6IE36 1432 aa12.45□□□□□ -0.42
CHKA-207ENST00000533728 NEFMP07197 916 aa12.44□□□□□ -0.42
CHKA-207ENST00000533728 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
CHKA-207ENST00000533728 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
CHKA-207ENST00000533728 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
CHKA-207ENST00000533728 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
CHKA-207ENST00000533728 CALD1Q05682 793 aaKnown RBP12.43□□□□□ -0.42
CHKA-207ENST00000533728 COG3Q96JB2 828 aa12.43□□□□□ -0.42
CHKA-207ENST00000533728 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
CHKA-207ENST00000533728 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
CHKA-207ENST00000533728 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
CHKA-207ENST00000533728 USP6P35125 1406 aa12.43□□□□□ -0.42
CHKA-207ENST00000533728 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
CHKA-207ENST00000533728 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
CHKA-207ENST00000533728 PARP4Q9UKK3 1724 aaKnown RBP12.42□□□□□ -0.42
CHKA-207ENST00000533728 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
CHKA-207ENST00000533728 CCDC85CA6NKD9 419 aa12.42□□□□□ -0.42
CHKA-207ENST00000533728 U2SURPO15042 1029 aaKnown RBP12.42□□□□□ -0.42
CHKA-207ENST00000533728 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
CHKA-207ENST00000533728 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
CHKA-207ENST00000533728 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms