RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 FER1L4A9Z1Z3 1794 aa19.27■□□□□ 0.67
CACNA1E-208ENST00000533229 KDRP35968 1356 aa19.26■□□□□ 0.67
CACNA1E-208ENST00000533229 INTS3Q68E01 1043 aaKnown RBP19.26■□□□□ 0.67
CACNA1E-208ENST00000533229 ANTXR1Q9H6X2 564 aa19.26■□□□□ 0.67
CACNA1E-208ENST00000533229 IGSF1Q8N6C5 1336 aa19.25■□□□□ 0.67
CACNA1E-208ENST00000533229 RGPD8O14715 1765 aaPredicted RBP19.25■□□□□ 0.67
CACNA1E-208ENST00000533229 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
CACNA1E-208ENST00000533229 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
CACNA1E-208ENST00000533229 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
CACNA1E-208ENST00000533229 BMP2KLQ5H9B9 411 aa19.24■□□□□ 0.67
CACNA1E-208ENST00000533229 KIF24Q5T7B8 1368 aa19.23■□□□□ 0.67
CACNA1E-208ENST00000533229 ANKARQ7Z5J8 1434 aa19.22■□□□□ 0.67
CACNA1E-208ENST00000533229 RBM33Q96EV2 1170 aaKnown RBP19.22■□□□□ 0.67
CACNA1E-208ENST00000533229 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
CACNA1E-208ENST00000533229 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
CACNA1E-208ENST00000533229 RTF1Q92541 710 aaKnown RBP19.22■□□□□ 0.67
CACNA1E-208ENST00000533229 HOXC9P31274 260 aa19.21■□□□□ 0.67
CACNA1E-208ENST00000533229 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
CACNA1E-208ENST00000533229 RIMS1Q86UR5 1692 aaKnown RBP19.21■□□□□ 0.67
CACNA1E-208ENST00000533229 GSE1Q14687 1217 aa19.21■□□□□ 0.67
CACNA1E-208ENST00000533229 ABTB2Q8N961 1025 aa19.21■□□□□ 0.67
CACNA1E-208ENST00000533229 G2E3Q7L622 706 aa19.19■□□□□ 0.66
CACNA1E-208ENST00000533229 DCTPP1Q9H773 170 aa19.19■□□□□ 0.66
CACNA1E-208ENST00000533229 PTPRCP08575 1304 aa19.19■□□□□ 0.66
CACNA1E-208ENST00000533229 SPRYD3Q8NCJ5 442 aa19.19■□□□□ 0.66
CACNA1E-208ENST00000533229 ATP10DQ9P241 1426 aa19.19■□□□□ 0.66
CACNA1E-208ENST00000533229 MSH6P52701 1360 aa19.18■□□□□ 0.66
CACNA1E-208ENST00000533229 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
CACNA1E-208ENST00000533229 MEIS3Q99687 375 aa19.18■□□□□ 0.66
CACNA1E-208ENST00000533229 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
CACNA1E-208ENST00000533229 ANKRD44Q8N8A2 993 aa19.18■□□□□ 0.66
CACNA1E-208ENST00000533229 CEP85Q6P2H3 762 aa19.17■□□□□ 0.66
CACNA1E-208ENST00000533229 FMN2Q9NZ56 1722 aa19.17■□□□□ 0.66
CACNA1E-208ENST00000533229 LTV1Q96GA3 475 aaPredicted RBP19.16■□□□□ 0.66
CACNA1E-208ENST00000533229 RTL1A6NKG5 1358 aa19.16■□□□□ 0.66
CACNA1E-208ENST00000533229 F6X3S4 739 aa19.16■□□□□ 0.66
CACNA1E-208ENST00000533229 TBC1D9Q6ZT07 1266 aa19.16■□□□□ 0.66
CACNA1E-208ENST00000533229 C16orf71Q8IYS4 520 aaPredicted RBP19.16■□□□□ 0.66
CACNA1E-208ENST00000533229 GSPT1P15170 499 aaKnown RBP19.15■□□□□ 0.66
CACNA1E-208ENST00000533229 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
CACNA1E-208ENST00000533229 NWD1Q149M9 1564 aa19.15■□□□□ 0.66
CACNA1E-208ENST00000533229 C14orf37Q86TY3 774 aa19.15■□□□□ 0.66
CACNA1E-208ENST00000533229 RPAP2Q8IXW5 612 aaPredicted RBP19.15■□□□□ 0.66
CACNA1E-208ENST00000533229 PHF8Q9UPP1 1060 aa19.15■□□□□ 0.66
CACNA1E-208ENST00000533229 GNAT3A8MTJ3 354 aa19.14■□□□□ 0.65
CACNA1E-208ENST00000533229 ANKLE2Q86XL3 938 aa19.14■□□□□ 0.65
CACNA1E-208ENST00000533229 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
CACNA1E-208ENST00000533229 HTATSF1O43719 755 aaKnown RBP19.13■□□□□ 0.65
CACNA1E-208ENST00000533229 MARF1Q9Y4F3 1742 aaKnown RBP19.13■□□□□ 0.65
CACNA1E-208ENST00000533229 USHBP1Q8N6Y0 703 aa19.13■□□□□ 0.65
CACNA1E-208ENST00000533229 KIF2CQ99661 725 aa19.13■□□□□ 0.65
CACNA1E-208ENST00000533229 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
CACNA1E-208ENST00000533229 IL27Q8NEV9 243 aa19.12■□□□□ 0.65
CACNA1E-208ENST00000533229 OTUD7AQ8TE49 926 aaPredicted RBP19.12■□□□□ 0.65
CACNA1E-208ENST00000533229 SMARCA5O60264 1052 aaPredicted RBP19.1■□□□□ 0.65
CACNA1E-208ENST00000533229 NECTIN2Q92692 538 aa19.1■□□□□ 0.65
CACNA1E-208ENST00000533229 APBB1O00213 710 aa19.09■□□□□ 0.65
CACNA1E-208ENST00000533229 MAP3K5Q99683 1374 aa19.08■□□□□ 0.65
CACNA1E-208ENST00000533229 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.64
CACNA1E-208ENST00000533229 HSCBQ8IWL3 235 aa19.08■□□□□ 0.64
CACNA1E-208ENST00000533229 CDC45O75419 566 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 TTC22Q5TAA0 569 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 CCT4P50991 539 aaKnown RBP19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 FLIIQ13045 1269 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 NBPF6Q5VWK0 638 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 IP6K1Q92551 441 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 SNX21Q969T3 373 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 NBPF4Q96M43 638 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 STK31Q9BXU1 1019 aa19.07■□□□□ 0.64
CACNA1E-208ENST00000533229 TAF7Q15545 349 aaPredicted RBP19.06■□□□□ 0.64
CACNA1E-208ENST00000533229 USP54Q70EL1 1684 aa19.06■□□□□ 0.64
CACNA1E-208ENST00000533229 LRRC37A3O60309 1634 aa19.06■□□□□ 0.64
CACNA1E-208ENST00000533229 CD2BP2O95400 341 aaKnown RBP19.06■□□□□ 0.64
CACNA1E-208ENST00000533229 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
CACNA1E-208ENST00000533229 PSME1Q06323 249 aa19.05■□□□□ 0.64
CACNA1E-208ENST00000533229 RBM42Q9BTD8 480 aaKnown RBP19.05■□□□□ 0.64
CACNA1E-208ENST00000533229 FKBP5Q13451 457 aaPredicted RBP19.04■□□□□ 0.64
CACNA1E-208ENST00000533229 CHD2O14647 1828 aaKnown RBP19.04■□□□□ 0.64
CACNA1E-208ENST00000533229 CHMP5Q9NZZ3 219 aa19.04■□□□□ 0.64
CACNA1E-208ENST00000533229 DDIT3P35638 169 aa19.03■□□□□ 0.64
CACNA1E-208ENST00000533229 NCOA3Q9Y6Q9 1424 aa19.03■□□□□ 0.64
CACNA1E-208ENST00000533229 ORAI2Q96SN7 254 aa19.03■□□□□ 0.64
CACNA1E-208ENST00000533229 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
CACNA1E-208ENST00000533229 NFAT5O94916 1531 aa19.02■□□□□ 0.64
CACNA1E-208ENST00000533229 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
CACNA1E-208ENST00000533229 SDSP20132 328 aa19.02■□□□□ 0.64
CACNA1E-208ENST00000533229 LGR6Q9HBX8 967 aa19.02■□□□□ 0.64
CACNA1E-208ENST00000533229 GNAI2P04899 355 aa19.01■□□□□ 0.63
CACNA1E-208ENST00000533229 XPCQ01831 940 aaPredicted RBP19.01■□□□□ 0.63
CACNA1E-208ENST00000533229 BABAM1Q9NWV8 329 aa19.01■□□□□ 0.63
CACNA1E-208ENST00000533229 HMMRO75330 724 aa19.01■□□□□ 0.63
CACNA1E-208ENST00000533229 LRRC59Q96AG4 307 aaKnown RBP19.01■□□□□ 0.63
CACNA1E-208ENST00000533229 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
CACNA1E-208ENST00000533229 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
CACNA1E-208ENST00000533229 PLEKHG5O94827 1062 aa19■□□□□ 0.63
CACNA1E-208ENST00000533229 MCM4P33991 863 aa19■□□□□ 0.63
CACNA1E-208ENST00000533229 PHAXQ9H814 394 aaKnown RBP19■□□□□ 0.63
CACNA1E-208ENST00000533229 EXOC6BQ9Y2D4 811 aa19■□□□□ 0.63
CACNA1E-208ENST00000533229 PNMA6EA0A0J9YXQ4 647 aa18.99■□□□□ 0.63
CACNA1E-208ENST00000533229 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms