RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 TRMT112Q9UI30 125 aaKnown RBP14.17□□□□□ -0.14
CSRP1-215ENST00000532313 MBD5Q9P267 1494 aa14.17□□□□□ -0.14
CSRP1-215ENST00000532313 IFIT1P09914 478 aaKnown RBP14.17□□□□□ -0.14
CSRP1-215ENST00000532313 SART3Q15020 963 aaKnown RBP14.17□□□□□ -0.14
CSRP1-215ENST00000532313 REC8O95072 547 aa14.17□□□□□ -0.14
CSRP1-215ENST00000532313 TMPOP42166 694 aaKnown RBP14.17□□□□□ -0.14
CSRP1-215ENST00000532313 NBPF6Q5VWK0 638 aa14.17□□□□□ -0.14
CSRP1-215ENST00000532313 NBPF5PQ86XG9 351 aaPredicted RBP14.17□□□□□ -0.14
CSRP1-215ENST00000532313 RASSF8Q8NHQ8 419 aa14.17□□□□□ -0.14
CSRP1-215ENST00000532313 NBPF4Q96M43 638 aa14.17□□□□□ -0.14
CSRP1-215ENST00000532313 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
CSRP1-215ENST00000532313 ARHGAP31Q2M1Z3 1444 aa14.16□□□□□ -0.14
CSRP1-215ENST00000532313 EXOSC9Q06265 439 aaKnown RBP14.16□□□□□ -0.14
CSRP1-215ENST00000532313 ZFYVE9O95405 1425 aa14.16□□□□□ -0.14
CSRP1-215ENST00000532313 PHF14O94880 888 aa14.16□□□□□ -0.14
CSRP1-215ENST00000532313 PLEKHG3A1L390 1219 aa14.16□□□□□ -0.14
CSRP1-215ENST00000532313 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
CSRP1-215ENST00000532313 RALYLQ86SE5 291 aaKnown RBP14.16□□□□□ -0.14
CSRP1-215ENST00000532313 ANKIB1Q9P2G1 1089 aa14.16□□□□□ -0.14
CSRP1-215ENST00000532313 ZNF622Q969S3 477 aaKnown RBP eCLIP14.15□□□□□ -0.14
CSRP1-215ENST00000532313 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
CSRP1-215ENST00000532313 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
CSRP1-215ENST00000532313 CSPP1Q1MSJ5 1256 aa14.15□□□□□ -0.14
CSRP1-215ENST00000532313 ST18O60284 1047 aa14.15□□□□□ -0.14
CSRP1-215ENST00000532313 CENPQQ7L2Z9 268 aaPredicted RBP14.15□□□□□ -0.14
CSRP1-215ENST00000532313 FAM196AQ6ZSG2 479 aa14.15□□□□□ -0.14
CSRP1-215ENST00000532313 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
CSRP1-215ENST00000532313 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
CSRP1-215ENST00000532313 TRIM29Q14134 588 aa14.14□□□□□ -0.15
CSRP1-215ENST00000532313 ZNF287Q9HBT7 754 aa14.14□□□□□ -0.15
CSRP1-215ENST00000532313 EDC4Q6P2E9 1401 aaKnown RBP14.14□□□□□ -0.15
CSRP1-215ENST00000532313 APBA3O96018 575 aa14.14□□□□□ -0.15
CSRP1-215ENST00000532313 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
CSRP1-215ENST00000532313 TRAPPC3LQ5T215 181 aa14.14□□□□□ -0.15
CSRP1-215ENST00000532313 DUSP27Q5VZP5 1158 aa14.14□□□□□ -0.15
CSRP1-215ENST00000532313 ADCY10Q96PN6 1610 aa14.13□□□□□ -0.15
CSRP1-215ENST00000532313 CCNL1Q9UK58 526 aaPredicted RBP14.13□□□□□ -0.15
CSRP1-215ENST00000532313 GLI2P10070 1586 aa14.13□□□□□ -0.15
CSRP1-215ENST00000532313 TPTE2Q6XPS3 522 aa14.13□□□□□ -0.15
CSRP1-215ENST00000532313 COG6Q9Y2V7 657 aa14.13□□□□□ -0.15
CSRP1-215ENST00000532313 NKTRP30414 1462 aaKnown RBP14.13□□□□□ -0.15
CSRP1-215ENST00000532313 COL17A1Q9UMD9 1497 aaPredicted RBP14.13□□□□□ -0.15
CSRP1-215ENST00000532313 IKQ13123 557 aaPredicted RBP14.13□□□□□ -0.15
CSRP1-215ENST00000532313 ABCA9Q8IUA7 1624 aa14.13□□□□□ -0.15
CSRP1-215ENST00000532313 IFIT5Q13325 482 aaKnown RBP14.12□□□□□ -0.15
CSRP1-215ENST00000532313 ANKRD18BA2A2Z9 1011 aa14.12□□□□□ -0.15
CSRP1-215ENST00000532313 CNTROBQ8N137 903 aa14.12□□□□□ -0.15
CSRP1-215ENST00000532313 MYO1BO43795 1136 aa14.12□□□□□ -0.15
CSRP1-215ENST00000532313 FYB1O15117 783 aa14.12□□□□□ -0.15
CSRP1-215ENST00000532313 PAXIP1Q6ZW49 1069 aaPredicted RBP14.12□□□□□ -0.15
CSRP1-215ENST00000532313 PTMSP20962 102 aa14.11□□□□□ -0.15
CSRP1-215ENST00000532313 ATF7IPQ6VMQ6 1270 aa14.11□□□□□ -0.15
CSRP1-215ENST00000532313 HDAC9Q9UKV0 1011 aa14.11□□□□□ -0.15
CSRP1-215ENST00000532313 NLRP3Q96P20 1036 aa14.11□□□□□ -0.15
CSRP1-215ENST00000532313 CPLX1O14810 134 aa14.11□□□□□ -0.15
CSRP1-215ENST00000532313 NFXL1Q6ZNB6 911 aa14.11□□□□□ -0.15
CSRP1-215ENST00000532313 JDP2Q8WYK2 163 aa14.11□□□□□ -0.15
CSRP1-215ENST00000532313 ZSCAN29Q8IWY8 852 aaPredicted RBP14.1□□□□□ -0.15
CSRP1-215ENST00000532313 RRP1P56182 461 aaKnown RBP14.1□□□□□ -0.15
CSRP1-215ENST00000532313 CCDC43Q96MW1 224 aaKnown RBP14.1□□□□□ -0.15
CSRP1-215ENST00000532313 C6orf229H3BNL8 230 aa14.1□□□□□ -0.15
CSRP1-215ENST00000532313 CCDC152Q4G0S7 254 aa14.1□□□□□ -0.15
CSRP1-215ENST00000532313 SBNO1A3KN83 1393 aa14.1□□□□□ -0.15
CSRP1-215ENST00000532313 METTL24Q5JXM2 366 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 MCM10Q7L590 875 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 CCDC87Q9NVE4 849 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 LDHCP07864 332 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 SLC5A1P13866 664 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 NF2P35240 595 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 XBP1P17861 261 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 HOXC9P31274 260 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 TTLL12Q14166 644 aaPredicted RBP14.09□□□□□ -0.15
CSRP1-215ENST00000532313 FAM184AQ8NB25 1140 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 EYA3Q99504 573 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 FSD1Q9BTV5 496 aa14.09□□□□□ -0.15
CSRP1-215ENST00000532313 CWC25Q9NXE8 425 aaPredicted RBP14.09□□□□□ -0.15
CSRP1-215ENST00000532313 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.15
CSRP1-215ENST00000532313 HSP90AB2PQ58FF8 381 aa14.08□□□□□ -0.16
CSRP1-215ENST00000532313 LMOD1P29536 600 aaPredicted RBP14.08□□□□□ -0.16
CSRP1-215ENST00000532313 JCADQ9P266 1359 aa14.07□□□□□ -0.16
CSRP1-215ENST00000532313 SPTY2D1Q68D10 685 aaPredicted RBP14.07□□□□□ -0.16
CSRP1-215ENST00000532313 MYD88Q99836 296 aa14.07□□□□□ -0.16
CSRP1-215ENST00000532313 THRAP3Q9Y2W1 955 aaKnown RBP14.07□□□□□ -0.16
CSRP1-215ENST00000532313 PDE3AQ14432 1141 aa14.07□□□□□ -0.16
CSRP1-215ENST00000532313 ALDH1L2Q3SY69 923 aa14.07□□□□□ -0.16
CSRP1-215ENST00000532313 BRMS1Q9HCU9 246 aa14.07□□□□□ -0.16
CSRP1-215ENST00000532313 CHAF1AQ13111 956 aaPredicted RBP14.07□□□□□ -0.16
CSRP1-215ENST00000532313 ABCC3O15438 1527 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 SPATA31A6Q5VVP1 1343 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 KRT27Q7Z3Y8 459 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 GCC1Q96CN9 775 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 RAI14Q9P0K7 980 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 INTS3Q68E01 1043 aaKnown RBP14.06□□□□□ -0.16
CSRP1-215ENST00000532313 LRP2BPQ9P2M1 347 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 FAM135BQ49AJ0 1406 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 UNC5CLQ8IV45 518 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 DNAAF4Q8WXU2 420 aa14.06□□□□□ -0.16
CSRP1-215ENST00000532313 IL16Q14005 1332 aa14.05□□□□□ -0.16
CSRP1-215ENST00000532313 SAFBQ15424 915 aaKnown RBP eCLIP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms