RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 CEP85Q6P2H3 762 aa17.51■□□□□ 0.39
LRRK1-209ENST00000532145 HDGFP51858 240 aaKnown RBP17.5■□□□□ 0.39
LRRK1-209ENST00000532145 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
LRRK1-209ENST00000532145 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
LRRK1-209ENST00000532145 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
LRRK1-209ENST00000532145 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
LRRK1-209ENST00000532145 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
LRRK1-209ENST00000532145 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-209ENST00000532145 USP26Q9BXU7 913 aa17.49■□□□□ 0.39
LRRK1-209ENST00000532145 TTC21BQ7Z4L5 1316 aa17.49■□□□□ 0.39
LRRK1-209ENST00000532145 CLCN1P35523 988 aa17.48■□□□□ 0.39
LRRK1-209ENST00000532145 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
LRRK1-209ENST00000532145 MLECQ14165 292 aa17.48■□□□□ 0.39
LRRK1-209ENST00000532145 MSH6P52701 1360 aa17.47■□□□□ 0.39
LRRK1-209ENST00000532145 SSFA2P28290 1259 aa17.47■□□□□ 0.39
LRRK1-209ENST00000532145 MCM10Q7L590 875 aa17.47■□□□□ 0.39
LRRK1-209ENST00000532145 GAS2L3Q86XJ1 694 aa17.47■□□□□ 0.39
LRRK1-209ENST00000532145 ROBO2Q9HCK4 1378 aa17.46■□□□□ 0.39
LRRK1-209ENST00000532145 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-209ENST00000532145 CRB1P82279 1406 aa17.46■□□□□ 0.39
LRRK1-209ENST00000532145 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.39
LRRK1-209ENST00000532145 PLEKHG3A1L390 1219 aa17.45■□□□□ 0.38
LRRK1-209ENST00000532145 USP31Q70CQ4 1352 aa17.45■□□□□ 0.38
LRRK1-209ENST00000532145 GOLGA6L22H0YM25 854 aa17.45■□□□□ 0.38
LRRK1-209ENST00000532145 SDSP20132 328 aa17.45■□□□□ 0.38
LRRK1-209ENST00000532145 MEIS3Q99687 375 aa17.45■□□□□ 0.38
LRRK1-209ENST00000532145 ACEP12821 1306 aa17.44■□□□□ 0.38
LRRK1-209ENST00000532145 IBTKQ9P2D0 1353 aaPredicted RBP17.44■□□□□ 0.38
LRRK1-209ENST00000532145 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
LRRK1-209ENST00000532145 BAG4O95429 457 aaKnown RBP17.44■□□□□ 0.38
LRRK1-209ENST00000532145 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
LRRK1-209ENST00000532145 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
LRRK1-209ENST00000532145 USP6P35125 1406 aa17.43■□□□□ 0.38
LRRK1-209ENST00000532145 TOPAZ1Q8N9V7 1692 aa17.43■□□□□ 0.38
LRRK1-209ENST00000532145 TMEM2Q9UHN6 1383 aa17.43■□□□□ 0.38
LRRK1-209ENST00000532145 KLHL40Q2TBA0 621 aa17.43■□□□□ 0.38
LRRK1-209ENST00000532145 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
LRRK1-209ENST00000532145 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
LRRK1-209ENST00000532145 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
LRRK1-209ENST00000532145 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
LRRK1-209ENST00000532145 NUCB2P80303 420 aa17.42■□□□□ 0.38
LRRK1-209ENST00000532145 ADAMTS13Q76LX8 1427 aa17.42■□□□□ 0.38
LRRK1-209ENST00000532145 OSBPL3Q9H4L5 887 aa17.41■□□□□ 0.38
LRRK1-209ENST00000532145 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
LRRK1-209ENST00000532145 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-209ENST00000532145 HMMRO75330 724 aa17.41■□□□□ 0.38
LRRK1-209ENST00000532145 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-209ENST00000532145 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
LRRK1-209ENST00000532145 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
LRRK1-209ENST00000532145 TNRQ92752 1358 aa17.4■□□□□ 0.38
LRRK1-209ENST00000532145 REC8O95072 547 aa17.4■□□□□ 0.38
LRRK1-209ENST00000532145 ESF1Q9H501 851 aaKnown RBP17.4■□□□□ 0.38
LRRK1-209ENST00000532145 ESPNB1AK53 854 aa17.39■□□□□ 0.37
LRRK1-209ENST00000532145 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
LRRK1-209ENST00000532145 ST18O60284 1047 aa17.39■□□□□ 0.37
LRRK1-209ENST00000532145 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
LRRK1-209ENST00000532145 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
LRRK1-209ENST00000532145 KDRP35968 1356 aa17.38■□□□□ 0.37
LRRK1-209ENST00000532145 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
LRRK1-209ENST00000532145 ERC2O15083 957 aa17.37■□□□□ 0.37
LRRK1-209ENST00000532145 APBB1O00213 710 aa17.37■□□□□ 0.37
LRRK1-209ENST00000532145 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
LRRK1-209ENST00000532145 PDE1AP54750 535 aa17.36■□□□□ 0.37
LRRK1-209ENST00000532145 G2E3Q7L622 706 aa17.36■□□□□ 0.37
LRRK1-209ENST00000532145 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
LRRK1-209ENST00000532145 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
LRRK1-209ENST00000532145 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
LRRK1-209ENST00000532145 RTF1Q92541 710 aaKnown RBP17.36■□□□□ 0.37
LRRK1-209ENST00000532145 TRIM44Q96DX7 344 aaPredicted RBP17.36■□□□□ 0.37
LRRK1-209ENST00000532145 FOXO3O43524 673 aa17.35■□□□□ 0.37
LRRK1-209ENST00000532145 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
LRRK1-209ENST00000532145 PLEKHG1Q9ULL1 1385 aa17.35■□□□□ 0.37
LRRK1-209ENST00000532145 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
LRRK1-209ENST00000532145 ZNF445P59923 1031 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 PKP1Q13835 747 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 PPP1R9BQ96SB3 815 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 LMBRD1Q9NUN5 540 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 FLT4P35916 1363 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 F6X3S4 739 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 MCTP1Q6DN14 999 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 SALL3Q9BXA9 1300 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 GNAI2P04899 355 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 CCDC173Q0VFZ6 552 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
LRRK1-209ENST00000532145 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
LRRK1-209ENST00000532145 NASPP49321 788 aaPredicted RBP17.33■□□□□ 0.36
LRRK1-209ENST00000532145 IGSF1Q8N6C5 1336 aa17.33■□□□□ 0.36
LRRK1-209ENST00000532145 ZGPATQ8N5A5 531 aaKnown RBP17.33■□□□□ 0.36
LRRK1-209ENST00000532145 AK9Q5TCS8 1911 aa17.32■□□□□ 0.36
LRRK1-209ENST00000532145 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
LRRK1-209ENST00000532145 LTKP29376 864 aa17.32■□□□□ 0.36
LRRK1-209ENST00000532145 FMN2Q9NZ56 1722 aa17.32■□□□□ 0.36
LRRK1-209ENST00000532145 ZDHHC9Q9Y397 364 aa17.31■□□□□ 0.36
LRRK1-209ENST00000532145 SOX12O15370 315 aa17.31■□□□□ 0.36
LRRK1-209ENST00000532145 EYA1Q99502 592 aa17.31■□□□□ 0.36
LRRK1-209ENST00000532145 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
LRRK1-209ENST00000532145 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
LRRK1-209ENST00000532145 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
LRRK1-209ENST00000532145 CEP170BQ9Y4F5 1589 aaPredicted RBP17.3■□□□□ 0.36
LRRK1-209ENST00000532145 GNAI3P08754 354 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms