RNA–Protein interactions for RNA: ENST00000531484.5

RELA-217, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 2,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-217ENST00000531484 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
RELA-217ENST00000531484 ZC3H6P61129 1189 aaKnown RBP13.12□□□□□ -0.31
RELA-217ENST00000531484 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
RELA-217ENST00000531484 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
RELA-217ENST00000531484 HMOX1P09601 288 aa13.11□□□□□ -0.31
RELA-217ENST00000531484 TRIM27P14373 513 aa13.11□□□□□ -0.31
RELA-217ENST00000531484 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
RELA-217ENST00000531484 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
RELA-217ENST00000531484 HSP90AB2PQ58FF8 381 aa13.11□□□□□ -0.31
RELA-217ENST00000531484 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
RELA-217ENST00000531484 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
RELA-217ENST00000531484 SEC24BO95487 1268 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 IL13P35225 146 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
RELA-217ENST00000531484 SLKQ9H2G2 1235 aaPredicted RBP13.1□□□□□ -0.31
RELA-217ENST00000531484 GCP02774 474 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 ITPRIPQ8IWB1 547 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 ANTXR1Q9H6X2 564 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 DDX19BQ9UMR2 479 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 ALS2Q96Q42 1657 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
RELA-217ENST00000531484 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
RELA-217ENST00000531484 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
RELA-217ENST00000531484 NOB1Q9ULX3 412 aaKnown RBP13.09□□□□□ -0.31
RELA-217ENST00000531484 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
RELA-217ENST00000531484 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
RELA-217ENST00000531484 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
RELA-217ENST00000531484 GLIPR1L2Q4G1C9 344 aa13.09□□□□□ -0.31
RELA-217ENST00000531484 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
RELA-217ENST00000531484 IPO8O15397 1037 aaKnown RBP13.08□□□□□ -0.32
RELA-217ENST00000531484 LTV1Q96GA3 475 aaPredicted RBP13.08□□□□□ -0.32
RELA-217ENST00000531484 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
RELA-217ENST00000531484 XRCC6P12956 609 aaKnown RBP eCLIP13.08□□□□□ -0.32
RELA-217ENST00000531484 BECN1Q14457 450 aa13.08□□□□□ -0.32
RELA-217ENST00000531484 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
RELA-217ENST00000531484 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
RELA-217ENST00000531484 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
RELA-217ENST00000531484 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
RELA-217ENST00000531484 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
RELA-217ENST00000531484 FSD2A1L4K1 749 aa13.06□□□□□ -0.32
RELA-217ENST00000531484 HSPA1LP34931 641 aa13.06□□□□□ -0.32
RELA-217ENST00000531484 CLCN1P35523 988 aa13.06□□□□□ -0.32
RELA-217ENST00000531484 GNAI1P63096 354 aa13.06□□□□□ -0.32
RELA-217ENST00000531484 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
RELA-217ENST00000531484 NFAT5O94916 1531 aa13.05□□□□□ -0.32
RELA-217ENST00000531484 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
RELA-217ENST00000531484 TMEM57Q8N5G2 664 aa13.05□□□□□ -0.32
RELA-217ENST00000531484 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
RELA-217ENST00000531484 ZMYND15Q9H091 742 aa13.05□□□□□ -0.32
RELA-217ENST00000531484 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
RELA-217ENST00000531484 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
RELA-217ENST00000531484 AMPHP49418 695 aa13.05□□□□□ -0.32
RELA-217ENST00000531484 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
RELA-217ENST00000531484 ARXQ96QS3 562 aa13.05□□□□□ -0.32
RELA-217ENST00000531484 PANK2Q9BZ23 570 aa13.05□□□□□ -0.32
RELA-217ENST00000531484 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
RELA-217ENST00000531484 PHLPP1O60346 1717 aa13.04□□□□□ -0.32
RELA-217ENST00000531484 RGPD1P0DJD0 1748 aa13.04□□□□□ -0.32
RELA-217ENST00000531484 HOXC9P31274 260 aa13.04□□□□□ -0.32
RELA-217ENST00000531484 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
RELA-217ENST00000531484 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
RELA-217ENST00000531484 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
RELA-217ENST00000531484 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
RELA-217ENST00000531484 GOLGA6L3A6NEY3 463 aa13.03□□□□□ -0.32
RELA-217ENST00000531484 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
RELA-217ENST00000531484 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
RELA-217ENST00000531484 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
RELA-217ENST00000531484 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.32
RELA-217ENST00000531484 ADAMTS2O95450 1211 aa13.02□□□□□ -0.32
RELA-217ENST00000531484 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.32
RELA-217ENST00000531484 MBIPQ9NS73 344 aa13.02□□□□□ -0.32
RELA-217ENST00000531484 SLIT3O75094 1523 aa13.02□□□□□ -0.32
RELA-217ENST00000531484 LTN1O94822 1766 aa13.02□□□□□ -0.33
RELA-217ENST00000531484 RRP9O43818 475 aaKnown RBP13.02□□□□□ -0.33
RELA-217ENST00000531484 HSP90AA2PQ14568 343 aaPredicted RBP13.02□□□□□ -0.33
RELA-217ENST00000531484 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
RELA-217ENST00000531484 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
RELA-217ENST00000531484 ZBTB40Q9NUA8 1239 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
RELA-217ENST00000531484 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 VAMP4O75379 141 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
RELA-217ENST00000531484 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 TBC1D2Q9BYX2 928 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
RELA-217ENST00000531484 USP54Q70EL1 1684 aa13□□□□□ -0.33
RELA-217ENST00000531484 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
RELA-217ENST00000531484 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
RELA-217ENST00000531484 TSPYL6Q8N831 410 aa13□□□□□ -0.33
RELA-217ENST00000531484 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
RELA-217ENST00000531484 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
RELA-217ENST00000531484 SULT6B1Q6IMI4 303 aa12.99□□□□□ -0.33
RELA-217ENST00000531484 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
RELA-217ENST00000531484 ARHGAP45Q92619 1136 aa12.99□□□□□ -0.33
RELA-217ENST00000531484 TBC1D32Q96NH3 1257 aa12.99□□□□□ -0.33
RELA-217ENST00000531484 CHMP4BQ9H444 224 aaKnown RBP12.99□□□□□ -0.33
RELA-217ENST00000531484 MCM4P33991 863 aa12.99□□□□□ -0.33
RELA-217ENST00000531484 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms