RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 DOT1LQ8TEK3 1739 aa25.74■■□□□ 1.71
PACSIN3-208ENST00000531226 COL3A1P02461 1466 aaPredicted RBP25.73■■□□□ 1.71
PACSIN3-208ENST00000531226 ZCRB1Q8TBF4 217 aaKnown RBP25.73■■□□□ 1.71
PACSIN3-208ENST00000531226 RGPD3A6NKT7 1758 aaPredicted RBP25.73■■□□□ 1.71
PACSIN3-208ENST00000531226 RGPD4Q7Z3J3 1758 aa25.73■■□□□ 1.71
PACSIN3-208ENST00000531226 IL13P35225 146 aa25.71■■□□□ 1.71
PACSIN3-208ENST00000531226 BAG6P46379 1132 aa25.71■■□□□ 1.71
PACSIN3-208ENST00000531226 DEFB132Q7Z7B7 95 aa25.71■■□□□ 1.71
PACSIN3-208ENST00000531226 PARD3Q8TEW0 1356 aa25.7■■□□□ 1.71
PACSIN3-208ENST00000531226 BTAF1O14981 1849 aa25.7■■□□□ 1.71
PACSIN3-208ENST00000531226 PLEKHG2Q9H7P9 1386 aa25.69■■□□□ 1.7
PACSIN3-208ENST00000531226 RREB1Q92766 1687 aa25.69■■□□□ 1.7
PACSIN3-208ENST00000531226 DDX54Q8TDD1 881 aaKnown RBP25.69■■□□□ 1.7
PACSIN3-208ENST00000531226 PPP2R1AP30153 589 aa25.68■■□□□ 1.7
PACSIN3-208ENST00000531226 PCDH11XQ9BZA7 1347 aa25.67■■□□□ 1.7
PACSIN3-208ENST00000531226 PCDH11YQ9BZA8 1340 aa25.67■■□□□ 1.7
PACSIN3-208ENST00000531226 KDRP35968 1356 aa25.66■■□□□ 1.7
PACSIN3-208ENST00000531226 TOGARAM1Q9Y4F4 1720 aa25.66■■□□□ 1.7
PACSIN3-208ENST00000531226 ITGB4P16144 1822 aa25.65■■□□□ 1.7
PACSIN3-208ENST00000531226 DIAPH1O60610 1272 aaKnown RBP25.65■■□□□ 1.7
PACSIN3-208ENST00000531226 APBA3O96018 575 aa25.65■■□□□ 1.7
PACSIN3-208ENST00000531226 BCL11BQ9C0K0 894 aaPredicted RBP25.65■■□□□ 1.7
PACSIN3-208ENST00000531226 EN1Q05925 392 aaPredicted RBP25.64■■□□□ 1.7
PACSIN3-208ENST00000531226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.64■■□□□ 1.7
PACSIN3-208ENST00000531226 NUP188Q5SRE5 1749 aa25.63■■□□□ 1.69
PACSIN3-208ENST00000531226 ZNF316A6NFI3 1004 aaPredicted RBP25.63■■□□□ 1.69
PACSIN3-208ENST00000531226 PTF1AQ7RTS3 328 aa25.63■■□□□ 1.69
PACSIN3-208ENST00000531226 AEBP1Q8IUX7 1158 aa25.63■■□□□ 1.69
PACSIN3-208ENST00000531226 SPG7Q9UQ90 795 aa25.63■■□□□ 1.69
PACSIN3-208ENST00000531226 SULT6B1Q6IMI4 303 aa25.62■■□□□ 1.69
PACSIN3-208ENST00000531226 ACSBG1Q96GR2 724 aa25.62■■□□□ 1.69
PACSIN3-208ENST00000531226 CFAP53Q96M91 514 aa25.62■■□□□ 1.69
PACSIN3-208ENST00000531226 VIRMAQ69YN4 1812 aaKnown RBP25.62■■□□□ 1.69
PACSIN3-208ENST00000531226 CYP27B1O15528 508 aa25.61■■□□□ 1.69
PACSIN3-208ENST00000531226 KCNQ2O43526 872 aa25.6■■□□□ 1.69
PACSIN3-208ENST00000531226 CAMKK2Q96RR4 588 aa25.59■■□□□ 1.69
PACSIN3-208ENST00000531226 RALBP1Q15311 655 aa25.58■■□□□ 1.69
PACSIN3-208ENST00000531226 EZH2Q15910 746 aaKnown RBP25.58■■□□□ 1.69
PACSIN3-208ENST00000531226 PLSCR1O15162 318 aa25.56■■□□□ 1.68
PACSIN3-208ENST00000531226 LY75O60449 1722 aa25.55■■□□□ 1.68
PACSIN3-208ENST00000531226 HMOX1P09601 288 aa25.55■■□□□ 1.68
PACSIN3-208ENST00000531226 AMOTQ4VCS5 1084 aa25.55■■□□□ 1.68
PACSIN3-208ENST00000531226 PLEKHO1Q53GL0 409 aaPredicted RBP25.55■■□□□ 1.68
PACSIN3-208ENST00000531226 SCN11AQ9UI33 1791 aa25.54■■□□□ 1.68
PACSIN3-208ENST00000531226 U2SURPO15042 1029 aaKnown RBP25.54■■□□□ 1.68
PACSIN3-208ENST00000531226 NKX1-1Q15270 411 aaPredicted RBP25.54■■□□□ 1.68
PACSIN3-208ENST00000531226 IFNL2Q8IZJ0 200 aa25.54■■□□□ 1.68
PACSIN3-208ENST00000531226 PHKG2P15735 406 aa25.53■■□□□ 1.68
PACSIN3-208ENST00000531226 PRIM1P49642 420 aaKnown RBP25.52■■□□□ 1.68
PACSIN3-208ENST00000531226 SYTL4Q96C24 671 aaPredicted RBP25.52■■□□□ 1.68
PACSIN3-208ENST00000531226 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
PACSIN3-208ENST00000531226 ZNF530Q6P9A1 599 aaPredicted RBP25.5■■□□□ 1.67
PACSIN3-208ENST00000531226 MYBBP1AQ9BQG0 1328 aaKnown RBP25.49■■□□□ 1.67
PACSIN3-208ENST00000531226 PRKRIP1Q9H875 184 aaPredicted RBP25.47■■□□□ 1.67
PACSIN3-208ENST00000531226 HSP90AB1P08238 724 aaKnown RBP25.46■■□□□ 1.67
PACSIN3-208ENST00000531226 KDM6AO15550 1401 aaPredicted RBP25.46■■□□□ 1.67
PACSIN3-208ENST00000531226 ADAMTS7Q9UKP4 1686 aa25.45■■□□□ 1.67
PACSIN3-208ENST00000531226 C1orf141Q5JVX7 400 aa25.45■■□□□ 1.66
PACSIN3-208ENST00000531226 PAPPAQ13219 1627 aa25.45■■□□□ 1.66
PACSIN3-208ENST00000531226 U2AF1L5P0DN76 240 aaPredicted RBP25.44■■□□□ 1.66
PACSIN3-208ENST00000531226 U2AF1Q01081 240 aaKnown RBP eCLIP25.44■■□□□ 1.66
PACSIN3-208ENST00000531226 TXNRD1Q16881 649 aa25.44■■□□□ 1.66
PACSIN3-208ENST00000531226 PROM2Q8N271 834 aa25.44■■□□□ 1.66
PACSIN3-208ENST00000531226 RSPH6AQ9H0K4 717 aa25.44■■□□□ 1.66
PACSIN3-208ENST00000531226 DCAF5Q96JK2 942 aa25.43■■□□□ 1.66
PACSIN3-208ENST00000531226 TAF1LQ8IZX4 1826 aa25.42■■□□□ 1.66
PACSIN3-208ENST00000531226 MPRIPQ6WCQ1 1025 aa25.42■■□□□ 1.66
PACSIN3-208ENST00000531226 PRKAR2BP31323 418 aa25.41■■□□□ 1.66
PACSIN3-208ENST00000531226 MTHFSDQ2M296 383 aaKnown RBP25.41■■□□□ 1.66
PACSIN3-208ENST00000531226 AKAP4Q5JQC9 854 aa25.41■■□□□ 1.66
PACSIN3-208ENST00000531226 DLG5Q8TDM6 1919 aa25.41■■□□□ 1.66
PACSIN3-208ENST00000531226 ERVV-2B6SEH9 535 aa25.39■■□□□ 1.66
PACSIN3-208ENST00000531226 FCHSD2O94868 740 aa25.39■■□□□ 1.66
PACSIN3-208ENST00000531226 PIGBQ92521 554 aa25.39■■□□□ 1.66
PACSIN3-208ENST00000531226 TMOD3Q9NYL9 352 aa25.39■■□□□ 1.66
PACSIN3-208ENST00000531226 C5P01031 1676 aa25.39■■□□□ 1.65
PACSIN3-208ENST00000531226 NBPF14Q5TI25 921 aa25.38■■□□□ 1.65
PACSIN3-208ENST00000531226 MRC1P22897 1456 aa25.37■■□□□ 1.65
PACSIN3-208ENST00000531226 GAS2L2Q8NHY3 880 aa25.37■■□□□ 1.65
PACSIN3-208ENST00000531226 PALLDQ8WX93 1383 aa25.36■■□□□ 1.65
PACSIN3-208ENST00000531226 SLC27A3Q5K4L6 730 aa25.36■■□□□ 1.65
PACSIN3-208ENST00000531226 QSER1Q2KHR3 1735 aa25.36■■□□□ 1.65
PACSIN3-208ENST00000531226 SIPA1L3O60292 1781 aaPredicted RBP25.36■■□□□ 1.65
PACSIN3-208ENST00000531226 TUBGCP6Q96RT7 1819 aa25.35■■□□□ 1.65
PACSIN3-208ENST00000531226 PHACTR3Q96KR7 559 aa25.35■■□□□ 1.65
PACSIN3-208ENST00000531226 PSDA5PKW4 1024 aaPredicted RBP25.34■■□□□ 1.65
PACSIN3-208ENST00000531226 SMARCC1Q92922 1105 aaPredicted RBP25.34■■□□□ 1.65
PACSIN3-208ENST00000531226 ANO8Q9HCE9 1232 aaPredicted RBP25.34■■□□□ 1.65
PACSIN3-208ENST00000531226 LRRC4BQ9NT99 713 aa25.34■■□□□ 1.65
PACSIN3-208ENST00000531226 MAP3K5Q99683 1374 aa25.33■■□□□ 1.65
PACSIN3-208ENST00000531226 ZNF831Q5JPB2 1677 aa25.33■■□□□ 1.65
PACSIN3-208ENST00000531226 R3HDM1Q15032 1099 aaKnown RBP25.33■■□□□ 1.65
PACSIN3-208ENST00000531226 CASZ1Q86V15 1759 aa25.32■■□□□ 1.64
PACSIN3-208ENST00000531226 CABP4P57796 275 aa25.32■■□□□ 1.64
PACSIN3-208ENST00000531226 RNMTO43148 476 aaKnown RBP25.31■■□□□ 1.64
PACSIN3-208ENST00000531226 CCNL1Q9UK58 526 aaPredicted RBP25.31■■□□□ 1.64
PACSIN3-208ENST00000531226 LGR6Q9HBX8 967 aa25.3■■□□□ 1.64
PACSIN3-208ENST00000531226 ASAP1Q9ULH1 1129 aa25.3■■□□□ 1.64
PACSIN3-208ENST00000531226 GNAT3A8MTJ3 354 aa25.29■■□□□ 1.64
PACSIN3-208ENST00000531226 KCNQ4P56696 695 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms