RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 BRMS1Q9HCU9 246 aa9.83□□□□□ -0.84
CSDE1-214ENST00000530886 GLI2P10070 1586 aa9.82□□□□□ -0.84
CSDE1-214ENST00000530886 KDM4AO75164 1064 aa9.82□□□□□ -0.84
CSDE1-214ENST00000530886 BRPF1P55201 1214 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-214ENST00000530886 BCL2L13Q9BXK5 485 aa9.82□□□□□ -0.84
CSDE1-214ENST00000530886 HDAC5Q9UQL6 1122 aa9.82□□□□□ -0.84
CSDE1-214ENST00000530886 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
CSDE1-214ENST00000530886 C17orf53Q8N3J3 647 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-214ENST00000530886 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-214ENST00000530886 TMEM87AQ8NBN3 555 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 PTCH1Q13635 1447 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 CDC45O75419 566 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 BRD1O95696 1058 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 PYCARDQ9ULZ3 195 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 ABCC1P33527 1531 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 MRC2Q9UBG0 1479 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 PLCH2O75038 1416 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 ABCC11Q96J66 1382 aa9.81□□□□□ -0.84
CSDE1-214ENST00000530886 HNRNPH2P55795 449 aaKnown RBP9.8□□□□□ -0.84
CSDE1-214ENST00000530886 SIRT2Q8IXJ6 389 aa9.8□□□□□ -0.84
CSDE1-214ENST00000530886 GCC1Q96CN9 775 aa9.8□□□□□ -0.84
CSDE1-214ENST00000530886 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.8□□□□□ -0.84
CSDE1-214ENST00000530886 TRAPPC8Q9Y2L5 1435 aa9.8□□□□□ -0.84
CSDE1-214ENST00000530886 SETD1AO15047 1707 aaKnown RBP9.8□□□□□ -0.84
CSDE1-214ENST00000530886 GOLGA6L6A8MZA4 724 aa9.8□□□□□ -0.84
CSDE1-214ENST00000530886 SLC52A1Q9NWF4 448 aa9.8□□□□□ -0.84
CSDE1-214ENST00000530886 RASSF4Q9H2L5 321 aa9.8□□□□□ -0.84
CSDE1-214ENST00000530886 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
CSDE1-214ENST00000530886 ZFYVE16Q7Z3T8 1539 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 GSPT1P15170 499 aaKnown RBP9.79□□□□□ -0.84
CSDE1-214ENST00000530886 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 ATF7IPQ6VMQ6 1270 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 CERS3Q8IU89 383 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 SSH1Q8WYL5 1049 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 CLTCQ00610 1675 aaKnown RBP9.79□□□□□ -0.84
CSDE1-214ENST00000530886 CARMIL2Q6F5E8 1435 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 DHX16O60231 1041 aaKnown RBP9.79□□□□□ -0.84
CSDE1-214ENST00000530886 ST18O60284 1047 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 NCAPGQ9BPX3 1015 aa9.79□□□□□ -0.84
CSDE1-214ENST00000530886 ZCCHC11Q5TAX3 1644 aaKnown RBP9.79□□□□□ -0.84
CSDE1-214ENST00000530886 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-214ENST00000530886 ADGRB3O60242 1522 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 TULP4Q9NRJ4 1543 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 KMT5BQ4FZB7 885 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 CCDC183Q5T5S1 534 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 MYCBPQ99417 103 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-214ENST00000530886 FUCA2Q9BTY2 467 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 UGGT1Q9NYU2 1555 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 NSD3Q9BZ95 1437 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 TSPY4P0CV99 314 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 TSPY10P0CW01 314 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 RBM6P78332 1123 aaKnown RBP9.78□□□□□ -0.84
CSDE1-214ENST00000530886 ICE2Q659A1 982 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 TMEM57Q8N5G2 664 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
CSDE1-214ENST00000530886 KIF20BQ96Q89 1820 aa9.78□□□□□ -0.84
CSDE1-214ENST00000530886 IL17RAQ96F46 866 aa9.77□□□□□ -0.84
CSDE1-214ENST00000530886 NOL10Q9BSC4 688 aaKnown RBP9.77□□□□□ -0.84
CSDE1-214ENST00000530886 AEBP1Q8IUX7 1158 aa9.77□□□□□ -0.85
CSDE1-214ENST00000530886 TXLNBQ8N3L3 684 aa9.77□□□□□ -0.85
CSDE1-214ENST00000530886 CHAMP1Q96JM3 812 aa9.77□□□□□ -0.85
CSDE1-214ENST00000530886 ZBTB7BO15156 539 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-214ENST00000530886 ZGPATQ8N5A5 531 aaKnown RBP9.77□□□□□ -0.85
CSDE1-214ENST00000530886 CCDC112Q8NEF3 446 aa9.77□□□□□ -0.85
CSDE1-214ENST00000530886 SIRT1Q96EB6 747 aa9.77□□□□□ -0.85
CSDE1-214ENST00000530886 RSPH14Q9UHP6 348 aa9.77□□□□□ -0.85
CSDE1-214ENST00000530886 FANCAO15360 1455 aa9.77□□□□□ -0.85
CSDE1-214ENST00000530886 GUCY2CP25092 1073 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 CUL4AQ13619 759 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 INTS4Q96HW7 963 aaKnown RBP9.76□□□□□ -0.85
CSDE1-214ENST00000530886 SLC26A8Q96RN1 970 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 ERICH4A6NGS2 130 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 MX1P20591 662 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 LNPKQ9C0E8 428 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 ATG3Q9NT62 314 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 IL16Q14005 1332 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 CASQ1P31415 396 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 MCM2P49736 904 aa9.76□□□□□ -0.85
CSDE1-214ENST00000530886 BMS1Q14692 1282 aaKnown RBP9.76□□□□□ -0.85
CSDE1-214ENST00000530886 GTF2A1P52655 376 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-214ENST00000530886 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-214ENST00000530886 SMC4Q9NTJ3 1288 aa9.75□□□□□ -0.85
CSDE1-214ENST00000530886 LRRC7Q96NW7 1537 aa9.75□□□□□ -0.85
CSDE1-214ENST00000530886 ARHGEF40Q8TER5 1519 aa9.75□□□□□ -0.85
CSDE1-214ENST00000530886 TNNT3P45378 269 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-214ENST00000530886 CEP120Q8N960 986 aa9.75□□□□□ -0.85
CSDE1-214ENST00000530886 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
CSDE1-214ENST00000530886 ERO1AQ96HE7 468 aa9.75□□□□□ -0.85
CSDE1-214ENST00000530886 ZNF446Q9NWS9 450 aa9.75□□□□□ -0.85
CSDE1-214ENST00000530886 NOB1Q9ULX3 412 aaKnown RBP9.75□□□□□ -0.85
CSDE1-214ENST00000530886 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-214ENST00000530886 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 H2AFXP16104 143 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-214ENST00000530886 KCND1Q9NSA2 647 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 PTPRCP08575 1304 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 ITPRIPQ8IWB1 547 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms