RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 WASF1Q92558 559 aa10.03□□□□□ -0.8
CTNND1-227ENST00000530748 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
CTNND1-227ENST00000530748 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTNND1-227ENST00000530748 DCTN1Q14203 1278 aa10.03□□□□□ -0.8
CTNND1-227ENST00000530748 KRT32Q14532 448 aa10.03□□□□□ -0.8
CTNND1-227ENST00000530748 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
CTNND1-227ENST00000530748 RAB11FIP3O75154 756 aa10.02□□□□□ -0.81
CTNND1-227ENST00000530748 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
CTNND1-227ENST00000530748 IGHMBP2P38935 993 aaKnown RBP10.02□□□□□ -0.81
CTNND1-227ENST00000530748 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTNND1-227ENST00000530748 KRT85P78386 507 aa10.02□□□□□ -0.81
CTNND1-227ENST00000530748 PPFIBP1Q86W92 1011 aa10.02□□□□□ -0.81
CTNND1-227ENST00000530748 RPAP2Q8IXW5 612 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-227ENST00000530748 SLFN5Q08AF3 891 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 CWC15Q9P013 229 aaKnown RBP10.01□□□□□ -0.81
CTNND1-227ENST00000530748 ADGRL1O94910 1474 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 ME1P48163 572 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 TDO2P48775 406 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 LARP1BQ659C4 914 aaKnown RBP10.01□□□□□ -0.81
CTNND1-227ENST00000530748 BLOC1S2Q6QNY1 142 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 RAPGEF3O95398 923 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 CWC27Q6UX04 472 aaKnown RBP10.01□□□□□ -0.81
CTNND1-227ENST00000530748 JAKMIP1Q96N16 626 aaKnown RBP10.01□□□□□ -0.81
CTNND1-227ENST00000530748 TMPOP42166 694 aaKnown RBP10.01□□□□□ -0.81
CTNND1-227ENST00000530748 LUC7LQ9NQ29 371 aaKnown RBP10.01□□□□□ -0.81
CTNND1-227ENST00000530748 RAI14Q9P0K7 980 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 NAIPQ13075 1403 aa10.01□□□□□ -0.81
CTNND1-227ENST00000530748 ERLIN2O94905 339 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 SPATA32Q96LK8 384 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 FBXO3Q9UK99 471 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 STARD3NLO95772 234 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 IMMTQ16891 758 aaKnown RBP10□□□□□ -0.81
CTNND1-227ENST00000530748 SPC24Q8NBT2 197 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 UBAC1Q9BSL1 405 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
CTNND1-227ENST00000530748 ALDH1L2Q3SY69 923 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 BACH2Q9BYV9 841 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 PPP6R1Q9UPN7 881 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 ABCC11Q96J66 1382 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 CD109Q6YHK3 1445 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 NKTRP30414 1462 aaKnown RBP10□□□□□ -0.81
CTNND1-227ENST00000530748 MAP3K1Q13233 1512 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 PDIA4P13667 645 aaKnown RBP10□□□□□ -0.81
CTNND1-227ENST00000530748 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 CFAP45Q9UL16 551 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 AKAP2Q9Y2D5 859 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 MAP7D2Q96T17 732 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 PRDM11Q9NQV5 511 aa10□□□□□ -0.81
CTNND1-227ENST00000530748 DEF6Q9H4E7 631 aa9.99□□□□□ -0.81
CTNND1-227ENST00000530748 CEP126Q9P2H0 1117 aa9.99□□□□□ -0.81
CTNND1-227ENST00000530748 CEP57L1Q8IYX8 460 aa9.99□□□□□ -0.81
CTNND1-227ENST00000530748 TMEM57Q8N5G2 664 aa9.99□□□□□ -0.81
CTNND1-227ENST00000530748 ABCC5O15440 1437 aa9.99□□□□□ -0.81
CTNND1-227ENST00000530748 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
CTNND1-227ENST00000530748 SLC26A8Q96RN1 970 aa9.99□□□□□ -0.81
CTNND1-227ENST00000530748 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 ZNF652Q9Y2D9 606 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-227ENST00000530748 AIDAQ96BJ3 306 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 SMTNL1A8MU46 457 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 LRP2BPQ9P2M1 347 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 GRIN2AQ12879 1464 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 CASTP20810 708 aaKnown RBP9.98□□□□□ -0.81
CTNND1-227ENST00000530748 AMOTQ4VCS5 1084 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 ZHX3Q9H4I2 956 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
CTNND1-227ENST00000530748 CCDC181Q5TID7 509 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-227ENST00000530748 PPP1R1BQ9UD71 204 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-227ENST00000530748 PLEKHH1Q9ULM0 1364 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 XPCQ01831 940 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-227ENST00000530748 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 NSD2O96028 1365 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 HMGN5P82970 282 aaKnown RBP9.97□□□□□ -0.81
CTNND1-227ENST00000530748 NUP62CLQ9H1M0 184 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 IL1RAPL2Q9NP60 686 aa9.97□□□□□ -0.81
CTNND1-227ENST00000530748 MX1P20591 662 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 ZNF76P36508 570 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 SKIDA1Q1XH10 827 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 IQCEQ6IPM2 695 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 MYD88Q99836 296 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 GRPEL1Q9HAV7 217 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-227ENST00000530748 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 ZNF287Q9HBT7 754 aa9.96□□□□□ -0.81
CTNND1-227ENST00000530748 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.81
CTNND1-227ENST00000530748 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
CTNND1-227ENST00000530748 PIP4K2BP78356 416 aa9.96□□□□□ -0.82
CTNND1-227ENST00000530748 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
CTNND1-227ENST00000530748 MCM10Q7L590 875 aa9.96□□□□□ -0.82
CTNND1-227ENST00000530748 GOLGA6L10A6NI86 522 aa9.96□□□□□ -0.82
CTNND1-227ENST00000530748 ZSCAN29Q8IWY8 852 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
CTNND1-227ENST00000530748 TAF7Q15545 349 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms