RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 RRAGDQ9NQL2 400 aaPredicted RBP24.15■■□□□ 1.46
PCF11-203ENST00000530304 HSP90AB2PQ58FF8 381 aa24.14■■□□□ 1.46
PCF11-203ENST00000530304 RPAP2Q8IXW5 612 aaPredicted RBP24.14■■□□□ 1.46
PCF11-203ENST00000530304 MRE11P49959 708 aa24.14■■□□□ 1.45
PCF11-203ENST00000530304 KIAA0232Q92628 1395 aa24.14■■□□□ 1.45
PCF11-203ENST00000530304 CEP85Q6P2H3 762 aa24.14■■□□□ 1.45
PCF11-203ENST00000530304 NUTM2FA1L443 756 aa24.13■■□□□ 1.45
PCF11-203ENST00000530304 OVOS2A0A0J9YW53 1432 aa24.12■■□□□ 1.45
PCF11-203ENST00000530304 OVOS2Q6IE36 1432 aa24.12■■□□□ 1.45
PCF11-203ENST00000530304 EIF5BO60841 1220 aaKnown RBP24.12■■□□□ 1.45
PCF11-203ENST00000530304 GAS2L2Q8NHY3 880 aa24.12■■□□□ 1.45
PCF11-203ENST00000530304 PTPRCP08575 1304 aa24.12■■□□□ 1.45
PCF11-203ENST00000530304 TMEM2Q9UHN6 1383 aa24.11■■□□□ 1.45
PCF11-203ENST00000530304 MSH6P52701 1360 aa24.11■■□□□ 1.45
PCF11-203ENST00000530304 OTUD7AQ8TE49 926 aaPredicted RBP24.11■■□□□ 1.45
PCF11-203ENST00000530304 RTL1A6NKG5 1358 aa24.1■■□□□ 1.45
PCF11-203ENST00000530304 TNRQ92752 1358 aa24.1■■□□□ 1.45
PCF11-203ENST00000530304 PLEKHG3A1L390 1219 aa24.1■■□□□ 1.45
PCF11-203ENST00000530304 GRPEL1Q9HAV7 217 aa24.1■■□□□ 1.45
PCF11-203ENST00000530304 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.09■■□□□ 1.45
PCF11-203ENST00000530304 MEIS3Q99687 375 aa24.09■■□□□ 1.45
PCF11-203ENST00000530304 PEAK1Q9H792 1746 aa24.09■■□□□ 1.45
PCF11-203ENST00000530304 SLC4A2P04920 1241 aa24.08■■□□□ 1.45
PCF11-203ENST00000530304 USP26Q9BXU7 913 aa24.08■■□□□ 1.45
PCF11-203ENST00000530304 ISY1Q9ULR0 285 aaKnown RBP24.08■■□□□ 1.45
PCF11-203ENST00000530304 USP6P35125 1406 aa24.08■■□□□ 1.45
PCF11-203ENST00000530304 ADAMTS13Q76LX8 1427 aa24.08■■□□□ 1.45
PCF11-203ENST00000530304 RABEP1Q15276 862 aa24.08■■□□□ 1.44
PCF11-203ENST00000530304 SKOR2Q2VWA4 1001 aaPredicted RBP24.08■■□□□ 1.44
PCF11-203ENST00000530304 CRB1P82279 1406 aa24.08■■□□□ 1.44
PCF11-203ENST00000530304 SOX12O15370 315 aa24.07■■□□□ 1.44
PCF11-203ENST00000530304 SMARCA5O60264 1052 aaPredicted RBP24.07■■□□□ 1.44
PCF11-203ENST00000530304 MIS18AQ9NYP9 233 aa24.07■■□□□ 1.44
PCF11-203ENST00000530304 RGPD1P0DJD0 1748 aa24.07■■□□□ 1.44
PCF11-203ENST00000530304 APBB1O00213 710 aa24.07■■□□□ 1.44
PCF11-203ENST00000530304 PTMSP20962 102 aa24.06■■□□□ 1.44
PCF11-203ENST00000530304 SSFA2P28290 1259 aa24.06■■□□□ 1.44
PCF11-203ENST00000530304 TOPAZ1Q8N9V7 1692 aa24.06■■□□□ 1.44
PCF11-203ENST00000530304 SDSP20132 328 aa24.06■■□□□ 1.44
PCF11-203ENST00000530304 USP31Q70CQ4 1352 aa24.06■■□□□ 1.44
PCF11-203ENST00000530304 UBR1Q8IWV7 1749 aa24.05■■□□□ 1.44
PCF11-203ENST00000530304 NALCNQ8IZF0 1738 aa24.05■■□□□ 1.44
PCF11-203ENST00000530304 FOXO3O43524 673 aa24.03■■□□□ 1.44
PCF11-203ENST00000530304 MAP3K19Q56UN5 1328 aa24.03■■□□□ 1.44
PCF11-203ENST00000530304 MTHFSDQ2M296 383 aaKnown RBP24.02■■□□□ 1.44
PCF11-203ENST00000530304 CASC1Q6TDU7 716 aa24.02■■□□□ 1.44
PCF11-203ENST00000530304 CLEC17AQ6ZS10 378 aa24.02■■□□□ 1.44
PCF11-203ENST00000530304 GAS2L3Q86XJ1 694 aa24.02■■□□□ 1.44
PCF11-203ENST00000530304 LTKP29376 864 aa24.02■■□□□ 1.44
PCF11-203ENST00000530304 ARHGEF10O15013 1369 aa24.01■■□□□ 1.43
PCF11-203ENST00000530304 G2E3Q7L622 706 aa24.01■■□□□ 1.43
PCF11-203ENST00000530304 RTF1Q92541 710 aaKnown RBP24.01■■□□□ 1.43
PCF11-203ENST00000530304 TSPYL4Q9UJ04 414 aa24.01■■□□□ 1.43
PCF11-203ENST00000530304 SLC4A10Q6U841 1118 aa24■■□□□ 1.43
PCF11-203ENST00000530304 SSH2Q76I76 1423 aa24■■□□□ 1.43
PCF11-203ENST00000530304 F6X3S4 739 aa23.99■■□□□ 1.43
PCF11-203ENST00000530304 GOLGA6L22H0YM25 854 aa23.99■■□□□ 1.43
PCF11-203ENST00000530304 HMMRO75330 724 aa23.99■■□□□ 1.43
PCF11-203ENST00000530304 BAG4O95429 457 aaKnown RBP23.98■■□□□ 1.43
PCF11-203ENST00000530304 PLEKHG1Q9ULL1 1385 aa23.98■■□□□ 1.43
PCF11-203ENST00000530304 CCT4P50991 539 aaKnown RBP23.97■■□□□ 1.43
PCF11-203ENST00000530304 SLC26A8Q96RN1 970 aa23.97■■□□□ 1.43
PCF11-203ENST00000530304 AK9Q5TCS8 1911 aa23.97■■□□□ 1.43
PCF11-203ENST00000530304 RIMS1Q86UR5 1692 aaKnown RBP23.96■■□□□ 1.43
PCF11-203ENST00000530304 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
PCF11-203ENST00000530304 REC8O95072 547 aa23.96■■□□□ 1.43
PCF11-203ENST00000530304 PTPRUQ92729 1446 aa23.95■■□□□ 1.43
PCF11-203ENST00000530304 SBNO1A3KN83 1393 aa23.95■■□□□ 1.42
PCF11-203ENST00000530304 FLT4P35916 1363 aa23.95■■□□□ 1.42
PCF11-203ENST00000530304 NUCB2P80303 420 aa23.95■■□□□ 1.42
PCF11-203ENST00000530304 OSBPL3Q9H4L5 887 aa23.95■■□□□ 1.42
PCF11-203ENST00000530304 KDRP35968 1356 aa23.94■■□□□ 1.42
PCF11-203ENST00000530304 ST18O60284 1047 aa23.94■■□□□ 1.42
PCF11-203ENST00000530304 CLCN1P35523 988 aa23.94■■□□□ 1.42
PCF11-203ENST00000530304 PDE1AP54750 535 aa23.94■■□□□ 1.42
PCF11-203ENST00000530304 EYA1Q99502 592 aa23.94■■□□□ 1.42
PCF11-203ENST00000530304 FMN2Q9NZ56 1722 aa23.93■■□□□ 1.42
PCF11-203ENST00000530304 ERC2O15083 957 aa23.93■■□□□ 1.42
PCF11-203ENST00000530304 KLHL40Q2TBA0 621 aa23.93■■□□□ 1.42
PCF11-203ENST00000530304 DDX49Q9Y6V7 483 aaKnown RBP23.93■■□□□ 1.42
PCF11-203ENST00000530304 GNAI2P04899 355 aa23.92■■□□□ 1.42
PCF11-203ENST00000530304 CYP2E1P05181 493 aaPredicted RBP23.92■■□□□ 1.42
PCF11-203ENST00000530304 AMPHP49418 695 aa23.92■■□□□ 1.42
PCF11-203ENST00000530304 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
PCF11-203ENST00000530304 PKP1Q13835 747 aa23.91■■□□□ 1.42
PCF11-203ENST00000530304 STK31Q9BXU1 1019 aa23.91■■□□□ 1.42
PCF11-203ENST00000530304 CWC22Q9HCG8 908 aaKnown RBP23.91■■□□□ 1.42
PCF11-203ENST00000530304 AMOTL2Q9Y2J4 779 aa23.91■■□□□ 1.42
PCF11-203ENST00000530304 CEP170BQ9Y4F5 1589 aaPredicted RBP23.91■■□□□ 1.42
PCF11-203ENST00000530304 MCTP1Q6DN14 999 aa23.9■■□□□ 1.42
PCF11-203ENST00000530304 NGDNQ8NEJ9 315 aaKnown RBP23.9■■□□□ 1.42
PCF11-203ENST00000530304 EXOC6BQ9Y2D4 811 aa23.9■■□□□ 1.42
PCF11-203ENST00000530304 ZGPATQ8N5A5 531 aaKnown RBP23.89■■□□□ 1.41
PCF11-203ENST00000530304 FLIIQ13045 1269 aa23.88■■□□□ 1.41
PCF11-203ENST00000530304 EID1Q9Y6B2 187 aa23.87■■□□□ 1.41
PCF11-203ENST00000530304 IBTKQ9P2D0 1353 aaPredicted RBP23.87■■□□□ 1.41
PCF11-203ENST00000530304 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
PCF11-203ENST00000530304 FKBP5Q13451 457 aaPredicted RBP23.86■■□□□ 1.41
PCF11-203ENST00000530304 CCDC30Q5VVM6 783 aa23.86■■□□□ 1.41
PCF11-203ENST00000530304 TSHZ3Q63HK5 1081 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms