RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-208	ENST00000529970	PDIA4	P13667	645 aa	Known RBP	5.8	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	SYTL4	Q96C24	671 aa	Predicted RBP	5.8	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	CCNL1	Q9UK58	526 aa	Predicted RBP	5.8	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	TTC21A	Q8NDW8	1320 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	PLEKHG2	Q9H7P9	1386 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	LRRC37A3	O60309	1634 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	CDK11B	P21127	795 aa	Known RBP	5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	NECTIN2	Q92692	538 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	PNPLA7	Q6ZV29	1317 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	CPSF1	Q10570	1443 aa	Known RBP	5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	LMO7	Q8WWI1	1683 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	JMY	Q8N9B5	988 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	ADCY9	O60503	1353 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	PEAK1	Q9H792	1746 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	CRYBG1	Q9Y4K1	1723 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	KIF3C	O14782	793 aa		5.79	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	SMC1B	Q8NDV3	1235 aa		5.78	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	DCAF11	Q8TEB1	546 aa		5.78	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	AIDA	Q96BJ3	306 aa		5.78	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	ARHGEF25	Q86VW2	580 aa		5.78	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	AK7	Q96M32	723 aa		5.78	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	USP47	Q96K76	1375 aa		5.78	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	IGSF1	Q8N6C5	1336 aa		5.78	□□□□□ -1.48
ARHGEF12-208	ENST00000529970	SOX12	O15370	315 aa		5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	PTF1A	Q7RTS3	328 aa		5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	BBX	Q8WY36	941 aa	Predicted RBP	5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	SMARCC1	Q92922	1105 aa	Predicted RBP	5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ABCC6	O95255	1503 aa		5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	AKAP12	Q02952	1782 aa		5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	EVC2	Q86UK5	1308 aa		5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	DDX54	Q8TDD1	881 aa	Known RBP	5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	TRPM1	Q7Z4N2	1603 aa		5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	CENPJ	Q9HC77	1338 aa	Predicted RBP	5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ZNF428	Q96B54	188 aa		5.77	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	NHS	Q6T4R5	1651 aa		5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	MSL1	Q68DK7	614 aa		5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ARHGAP27	Q6ZUM4	889 aa		5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	IFNLR1	Q8IU57	520 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	DNAJC5G	Q8N7S2	189 aa		5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	C1orf115	Q9H7X2	142 aa		5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	BRPF1	P55201	1214 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	SLIT3	O75094	1523 aa		5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	HSPA1A	P0DMV8	641 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	HSPA1B	P0DMV9	641 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ANKRD36B	Q8N2N9	1353 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ADGRB1	O14514	1584 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	LRRC4B	Q9NT99	713 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	CCDC87	Q9NVE4	849 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	SBF2	Q86WG5	1849 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	COL23A1	Q86Y22	540 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ANKRD24	Q8TF21	1146 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	CABP1	Q9NZU7	370 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	BCS1L	Q9Y276	419 aa		5.75	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	TTC21B	Q7Z4L5	1316 aa		5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	PRIM1	P49642	420 aa	Known RBP	5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	TGFB2	P61812	414 aa		5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	EP400	Q96L91	3159 aa		5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	CABP2	Q9NPB3	220 aa		5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	PAPPA	Q13219	1627 aa		5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	CGNL1	Q0VF96	1302 aa		5.74	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	FCHSD2	O94868	740 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	SPRYD3	Q8NCJ5	442 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ZCRB1	Q8TBF4	217 aa	Known RBP	5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	RAPGEF4	Q8WZA2	1011 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	AXIN2	Q9Y2T1	843 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ERBB3	P21860	1342 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ZC3H4	Q9UPT8	1303 aa	Known RBP	5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	QSER1	Q2KHR3	1735 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	PRDM10	Q9NQV6	1147 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	C10orf71	Q711Q0	1435 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	CLSPN	Q9HAW4	1339 aa		5.73	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	SSFA2	P28290	1259 aa		5.72	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	CTCF	P49711	727 aa	Predicted RBP	5.72	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	NMRK2	Q9NPI5	230 aa		5.72	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	KTN1	Q86UP2	1357 aa	Known RBP	5.72	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	C9orf131	Q5VYM1	1079 aa		5.72	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	TAT	P17735	454 aa	Predicted RBP	5.71	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	NLGN1	Q8N2Q7	840 aa		5.71	□□□□□ -1.49
ARHGEF12-208	ENST00000529970	ARHGEF28	Q8N1W1	1705 aa	Known RBP	5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	SMG6	Q86US8	1419 aa	Known RBP	5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	VEGFA	P15692	232 aa	Predicted RBP	5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	PARP3	Q9Y6F1	533 aa		5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	WNK3	Q9BYP7	1800 aa		5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	AMPH	P49418	695 aa		5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	TERF2IP	Q9NYB0	399 aa		5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	RNF181	Q9P0P0	153 aa		5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	QRICH2	Q9H0J4	1663 aa		5.71	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	SRCAP	Q6ZRS2	3230 aa		5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	PHF14	O94880	888 aa		5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	MLLT1	Q03111	559 aa	Predicted RBP	5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	DALRD3	Q5D0E6	543 aa	Known RBP	5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	LTV1	Q96GA3	475 aa	Predicted RBP	5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	PIM2	Q9P1W9	311 aa		5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	WDR90	Q96KV7	1748 aa		5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	BTAF1	O14981	1849 aa		5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	BEGAIN	Q9BUH8	593 aa		5.7	□□□□□ -1.5
ARHGEF12-208	ENST00000529970	PIK3C2A	O00443	1686 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms