RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	GSPT1	P15170	499 aa	Known RBP	29.08	■■■□□ 2.25
GSDMD-208	ENST00000528475		K7ELQ4	463 aa	Predicted RBP	29.07	■■■□□ 2.24
GSDMD-208	ENST00000528475	RAB3GAP1	Q15042	981 aa		29.07	■■■□□ 2.24
GSDMD-208	ENST00000528475	PLEKHG1	Q9ULL1	1385 aa		29.06	■■■□□ 2.24
GSDMD-208	ENST00000528475	XRCC6	P12956	609 aa	Known RBP eCLIP	29.05	■■■□□ 2.24
GSDMD-208	ENST00000528475	TTC22	Q5TAA0	569 aa		29.05	■■■□□ 2.24
GSDMD-208	ENST00000528475	TNPO1	Q92973	898 aa	Known RBP	29.05	■■■□□ 2.24
GSDMD-208	ENST00000528475	ISY1	Q9ULR0	285 aa	Known RBP	29.05	■■■□□ 2.24
GSDMD-208	ENST00000528475	CRB1	P82279	1406 aa		29.05	■■■□□ 2.24
GSDMD-208	ENST00000528475	SSH2	Q76I76	1423 aa		29.05	■■■□□ 2.24
GSDMD-208	ENST00000528475	PTMS	P20962	102 aa		29.04	■■■□□ 2.24
GSDMD-208	ENST00000528475	GBP4	Q96PP9	640 aa		29.04	■■■□□ 2.24
GSDMD-208	ENST00000528475	ARHGEF10	O15013	1369 aa		29.04	■■■□□ 2.24
GSDMD-208	ENST00000528475	CEP85	Q6P2H3	762 aa		29.03	■■■□□ 2.24
GSDMD-208	ENST00000528475	RTL1	A6NKG5	1358 aa		29.02	■■■□□ 2.24
GSDMD-208	ENST00000528475	CD2BP2	O95400	341 aa	Known RBP	29.01	■■■□□ 2.24
GSDMD-208	ENST00000528475	MCM10	Q7L590	875 aa		29.01	■■■□□ 2.23
GSDMD-208	ENST00000528475	KRT24	Q2M2I5	525 aa		29	■■■□□ 2.23
GSDMD-208	ENST00000528475	GZF1	Q9H116	711 aa	Predicted RBP	29	■■■□□ 2.23
GSDMD-208	ENST00000528475	MSH6	P52701	1360 aa		29	■■■□□ 2.23
GSDMD-208	ENST00000528475	HSP90AB2P	Q58FF8	381 aa		29	■■■□□ 2.23
GSDMD-208	ENST00000528475	MRE11	P49959	708 aa		28.99	■■■□□ 2.23
GSDMD-208	ENST00000528475	TTC21A	Q8NDW8	1320 aa		28.98	■■■□□ 2.23
GSDMD-208	ENST00000528475	FMN2	Q9NZ56	1722 aa		28.98	■■■□□ 2.23
GSDMD-208	ENST00000528475	SKOR2	Q2VWA4	1001 aa	Predicted RBP	28.98	■■■□□ 2.23
GSDMD-208	ENST00000528475	CEBPA	P49715	358 aa	Predicted RBP	28.97	■■■□□ 2.23
GSDMD-208	ENST00000528475	RABEP1	Q15276	862 aa		28.97	■■■□□ 2.23
GSDMD-208	ENST00000528475	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.97	■■■□□ 2.23
GSDMD-208	ENST00000528475	HSP90AA1	P07900	732 aa	Known RBP	28.97	■■■□□ 2.23
GSDMD-208	ENST00000528475	CLEC17A	Q6ZS10	378 aa		28.96	■■■□□ 2.23
GSDMD-208	ENST00000528475	RBM42	Q9BTD8	480 aa	Known RBP	28.96	■■■□□ 2.23
GSDMD-208	ENST00000528475	KDR	P35968	1356 aa		28.94	■■■□□ 2.22
GSDMD-208	ENST00000528475	C16orf71	Q8IYS4	520 aa	Predicted RBP	28.93	■■■□□ 2.22
GSDMD-208	ENST00000528475	PTPRU	Q92729	1446 aa		28.93	■■■□□ 2.22
GSDMD-208	ENST00000528475	USP26	Q9BXU7	913 aa		28.93	■■■□□ 2.22
GSDMD-208	ENST00000528475	SBNO1	A3KN83	1393 aa		28.93	■■■□□ 2.22
GSDMD-208	ENST00000528475	GAS2L2	Q8NHY3	880 aa		28.93	■■■□□ 2.22
GSDMD-208	ENST00000528475	LTK	P29376	864 aa		28.92	■■■□□ 2.22
GSDMD-208	ENST00000528475	MEIS3	Q99687	375 aa		28.92	■■■□□ 2.22
GSDMD-208	ENST00000528475	MAP3K19	Q56UN5	1328 aa		28.92	■■■□□ 2.22
GSDMD-208	ENST00000528475	FLT4	P35916	1363 aa		28.92	■■■□□ 2.22
GSDMD-208	ENST00000528475	SLC4A2	P04920	1241 aa		28.91	■■■□□ 2.22
GSDMD-208	ENST00000528475	HMMR	O75330	724 aa		28.9	■■■□□ 2.22
GSDMD-208	ENST00000528475	SDS	P20132	328 aa		28.89	■■■□□ 2.22
GSDMD-208	ENST00000528475	CCT4	P50991	539 aa	Known RBP	28.89	■■■□□ 2.22
GSDMD-208	ENST00000528475	CASC1	Q6TDU7	716 aa		28.89	■■■□□ 2.22
GSDMD-208	ENST00000528475	GRPEL1	Q9HAV7	217 aa		28.89	■■■□□ 2.22
GSDMD-208	ENST00000528475	MTHFSD	Q2M296	383 aa	Known RBP	28.89	■■■□□ 2.21
GSDMD-208	ENST00000528475	OTUD7A	Q8TE49	926 aa	Predicted RBP	28.89	■■■□□ 2.21
GSDMD-208	ENST00000528475	FER1L4	A9Z1Z3	1794 aa		28.88	■■■□□ 2.21
GSDMD-208	ENST00000528475	RTF1	Q92541	710 aa	Known RBP	28.88	■■■□□ 2.21
GSDMD-208	ENST00000528475	PANK2	Q9BZ23	570 aa		28.88	■■■□□ 2.21
GSDMD-208	ENST00000528475	OSBPL3	Q9H4L5	887 aa		28.87	■■■□□ 2.21
GSDMD-208	ENST00000528475	RRAGD	Q9NQL2	400 aa	Predicted RBP	28.87	■■■□□ 2.21
GSDMD-208	ENST00000528475	IGSF1	Q8N6C5	1336 aa		28.87	■■■□□ 2.21
GSDMD-208	ENST00000528475	TSPYL4	Q9UJ04	414 aa		28.87	■■■□□ 2.21
GSDMD-208	ENST00000528475	LRRC37A3	O60309	1634 aa		28.86	■■■□□ 2.21
GSDMD-208	ENST00000528475	HTATSF1	O43719	755 aa	Known RBP	28.86	■■■□□ 2.21
GSDMD-208	ENST00000528475	NUTM2F	A1L443	756 aa		28.85	■■■□□ 2.21
GSDMD-208	ENST00000528475	FOXD4L1	Q9NU39	408 aa		28.85	■■■□□ 2.21
GSDMD-208	ENST00000528475	RIMS1	Q86UR5	1692 aa	Known RBP	28.85	■■■□□ 2.21
GSDMD-208	ENST00000528475	SLIT1	O75093	1534 aa		28.85	■■■□□ 2.21
GSDMD-208	ENST00000528475	ARX	Q96QS3	562 aa		28.84	■■■□□ 2.21
GSDMD-208	ENST00000528475	ARHGAP23	Q9P227	1491 aa		28.84	■■■□□ 2.21
GSDMD-208	ENST00000528475	SMARCA5	O60264	1052 aa	Predicted RBP	28.84	■■■□□ 2.21
GSDMD-208	ENST00000528475	SSFA2	P28290	1259 aa		28.84	■■■□□ 2.21
GSDMD-208	ENST00000528475	FOXO3	O43524	673 aa		28.83	■■■□□ 2.21
GSDMD-208	ENST00000528475	GOLGA6L22	H0YM25	854 aa		28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	DIP2A	Q14689	1571 aa		28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	REC8	O95072	547 aa		28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	PLPPR3	Q6T4P5	718 aa		28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	G2E3	Q7L622	706 aa		28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	TBX22	Q9Y458	520 aa		28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	EID1	Q9Y6B2	187 aa		28.82	■■■□□ 2.2
GSDMD-208	ENST00000528475	DNAJC5	Q9H3Z4	198 aa		28.81	■■■□□ 2.2
GSDMD-208	ENST00000528475	MIS18A	Q9NYP9	233 aa		28.81	■■■□□ 2.2
GSDMD-208	ENST00000528475	PIK3C2A	O00443	1686 aa		28.81	■■■□□ 2.2
GSDMD-208	ENST00000528475	NUCB2	P80303	420 aa		28.81	■■■□□ 2.2
GSDMD-208	ENST00000528475	AMOTL2	Q9Y2J4	779 aa		28.81	■■■□□ 2.2
GSDMD-208	ENST00000528475	SOS1	Q07889	1333 aa	Predicted RBP	28.8	■■■□□ 2.2
GSDMD-208	ENST00000528475	EYA1	Q99502	592 aa		28.8	■■■□□ 2.2
GSDMD-208	ENST00000528475	SLC26A8	Q96RN1	970 aa		28.79	■■■□□ 2.2
GSDMD-208	ENST00000528475	FAM208A	Q9UK61	1670 aa	Known RBP	28.79	■■■□□ 2.2
GSDMD-208	ENST00000528475	BAG4	O95429	457 aa	Known RBP	28.79	■■■□□ 2.2
GSDMD-208	ENST00000528475	GNAI2	P04899	355 aa		28.78	■■■□□ 2.2
GSDMD-208	ENST00000528475	CYP2E1	P05181	493 aa	Predicted RBP	28.78	■■■□□ 2.2
GSDMD-208	ENST00000528475	CWC22	Q9HCG8	908 aa	Known RBP	28.78	■■■□□ 2.2
GSDMD-208	ENST00000528475	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.78	■■■□□ 2.2
GSDMD-208	ENST00000528475	ERC2	O15083	957 aa		28.78	■■■□□ 2.2
GSDMD-208	ENST00000528475	SOX12	O15370	315 aa		28.78	■■■□□ 2.2
GSDMD-208	ENST00000528475	USP54	Q70EL1	1684 aa		28.77	■■■□□ 2.2
GSDMD-208	ENST00000528475	ST18	O60284	1047 aa		28.77	■■■□□ 2.2
GSDMD-208	ENST00000528475	PDE1A	P54750	535 aa		28.77	■■■□□ 2.2
GSDMD-208	ENST00000528475	STK31	Q9BXU1	1019 aa		28.77	■■■□□ 2.2
GSDMD-208	ENST00000528475		F6X3S4	739 aa		28.76	■■■□□ 2.19
GSDMD-208	ENST00000528475	AMPH	P49418	695 aa		28.76	■■■□□ 2.19
GSDMD-208	ENST00000528475	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.76	■■■□□ 2.19
GSDMD-208	ENST00000528475	XRN1	Q8IZH2	1706 aa	Known RBP	28.76	■■■□□ 2.19
GSDMD-208	ENST00000528475	KLHL40	Q2TBA0	621 aa		28.76	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms